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Discovering Change-Point Patterns in Dynamic Functional Brain Connectivity of a Population

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Information Processing in Medical Imaging (IPMI 2017)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 10265))

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Abstract

This paper seeks to discover common change-point patterns, associated with functional connectivity (FC) in human brain, across multiple subjects. FC, represented as a covariance or a correlation matrix, relates to the similarity of fMRI responses across different brain regions, when a brain is simply resting or performing a task under an external stimulus. While the dynamical nature of FC is well accepted, this paper develops a formal statistical test for finding change-points in times series associated with FC observed over time. It represents instantaneous connectivity by a symmetric positive-definite matrix, and uses a Riemannian metric on this space to develop a graphical method for detecting change-points in a time series of such matrices. It also provides a graphical representation of estimated FC for stationary subintervals in between detected change-points. Furthermore, it uses a temporal alignment of the test statistic, viewed as a real-valued function over time, to remove temporal variability and to discover common change-point patterns across subjects, tasks, and regions. This method is illustrated using HCP database for multiple subjects and tasks.

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References

  1. Chen, H., Zhang, N.: Graph-based change-point detection. Ann. Stat. 43(1), 139–176 (2015)

    Article  MathSciNet  MATH  Google Scholar 

  2. Van Essen, D.C., et al.: The WU-Minn human connectome project: an overview. NeuroImage 80, 62–79 (2013)

    Article  Google Scholar 

  3. Barch, D.M., et al.: Function in the human connectome: task-fMRI and individual differences in behavior. NeuroImage 80, 169–189 (2013)

    Article  Google Scholar 

  4. Castelli, F., et al.: Movement and mind: a functional imaging study of perception and interpretation of complex intentional movement patterns. NeuroImage 12(3), 314–325 (2000)

    Article  Google Scholar 

  5. Cribben, I., et al.: Detecting functional connectivity change points for single-subject fMRI data. Front. Comput. Neurosci. 7(143) (2013)

    Google Scholar 

  6. Friedman, J., et al.: Sparse inverse covariance estimation with the graphical lasso. Biostatistics 9(3), 432–441 (2008)

    Article  MATH  Google Scholar 

  7. Su, J., et al.: Fitting optimal curves to time-indexed, noisy observations on nonlinear manifolds. J. Image Vis. Comput. 30(6–7), 428–442 (2012)

    Article  Google Scholar 

  8. Glasser, M.F., et al.: The minimal preprocessing pipelines for the Human Connectome Project. NeuroImage 80, 105–124 (2013)

    Article  Google Scholar 

  9. Hinne, M., et al.: Bayesian estimation of conditional independence graphs improves functional connectivity estimates. PLoS Comput. Biol. 11(11), e1004534 (2015)

    Article  Google Scholar 

  10. Lindquist, M., et al.: Evaluating dynamic bivariate correlations in resting-state fMRI: a comparison study and a new approach. NeuroImage 101, 531–546 (2014)

    Article  Google Scholar 

  11. Delgado, M.R., et al.: Tracking the hemodynamic responses to reward and punishment in the striatum. J. Neurophysiol. 84(6), 3072–3077 (2000)

    MathSciNet  Google Scholar 

  12. Tzourio-Mazoyer, N., et al.: Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain. NeuroImage 15(1), 273–279 (2002)

    Article  Google Scholar 

  13. Hindriks, R., et al.: Can sliding-window correlations reveal dynamic functional connectivity in resting-state fMRI? NeuroImage 127, 242–256 (2016)

    Article  Google Scholar 

  14. Hutchison, R.M., et al.: Dynamic functional connectivity: promise, issues, and interpretations. NeuroImage 80, 360–378 (2013)

    Article  Google Scholar 

  15. Monti, R.P., et al.: Estimating time-varying brain connectivity networks from functional MRI time series. NeuroImage 103, 427–443 (2014)

    Article  Google Scholar 

  16. Pennec, X., et al.: A Riemannian framework for tensor computing. Int. J. Comput. Vis. 66(1), 41–66 (2006)

    Article  MathSciNet  MATH  Google Scholar 

  17. Friston, K.J.: Functional and effective connectivity: a review. Brain Connect. 1(1), 13–36 (2011)

    Article  MathSciNet  Google Scholar 

  18. Poldrack, R.A.: Region of interest analysis for fMRI. Soc. Cogn. Affect. Neurosci. 2(1), 67–70 (2007)

    Article  Google Scholar 

  19. Srivastava, A., Klassen, E.: Functional and Shape Data Analysis. Springer, Heidelberg (2016)

    Book  MATH  Google Scholar 

  20. Whitfield-Gabrieli, S., Nieto-Castanon, A.: Conn: a functional connectivity toolbox for correlated and anticorrelated brain networks. Brain Connect. 2(3), 125–141 (2012)

    Article  Google Scholar 

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Acknowledgments

This research was supported in part by NSF grants DMS 1621787 and CCF 1617397 to AS. ZZ was partially supported by NSF grant DMS-1127914 to SAMSI. Data were provided in part by the HCP, WU-Minn Consortium (Principal Investigators: David Van Essen and Kamil Ugurbil; 1U54MH091657).

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Correspondence to Mengyu Dai .

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Dai, M., Zhang, Z., Srivastava, A. (2017). Discovering Change-Point Patterns in Dynamic Functional Brain Connectivity of a Population. In: Niethammer, M., et al. Information Processing in Medical Imaging. IPMI 2017. Lecture Notes in Computer Science(), vol 10265. Springer, Cham. https://doi.org/10.1007/978-3-319-59050-9_29

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  • DOI: https://doi.org/10.1007/978-3-319-59050-9_29

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-59049-3

  • Online ISBN: 978-3-319-59050-9

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