Skip to main content

Introduction to Molecular Allergology: Protein Families, Databases, and Potential Benefits

  • Chapter
  • First Online:
Molecular Allergy Diagnostics

Abstract

Recent research into allergens has changed our understanding of allergic reactions, especially with regard to those mediated by immunoglobulin E (IgE). The previous (and primarily biological) categorization of allergen sources as pollens, mites, animal epithelial tissue, mold spores, foods, and insect venoms is being augmented by knowledge of molecular structures of the individual allergens and their categorization into protein families. Molecular allergology allows more sensitive and precise diagnosis and detects individual patterns of sensitization. Cross-sensitization, sensitization to marker allergens, and prognostically important sensitization to high-risk allergens can, therefore, be examined in depth.

This chapter begins by presenting the nomenclature of immediate-type allergens and the classification systems used in molecular allergology. The principles of protein relationships and the benefits of available allergen databases are discussed, and the use of these methods in molecular epidemiology and allergy diagnostics is outlined.

This contribution is based on a publication that appeared in the Allergo Journal in 2010 (Kleine-Tebbe J, Ollert M, Jakob T: Molekulare Allergologie: Nomenklatur, Proteinfamilien, Datenbanken und potenzieller Nutzen. Allergo J 2010; 19: 390–394) and which has been updated, expanded, and translated into English as a chapter for this book.

The authors gratefully thank Dr. Steve Love, PhD, Laguna Niguel, CA, USA, for reading the manuscript, helpful suggestions, and editorial assistance with the English translation.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 109.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 139.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 199.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  • Barber D, de la Torre F, Feo F, Florido F, Guardia P, Moreno C, Quiralte J, Lombardero M, Villalba M, Salcedo G, Rodriguez R. Understanding patient sensitization profiles in complex pollen areas: a molecular epidemiological study. Allergy. 2008;63:1550–8.

    Article  CAS  PubMed  Google Scholar 

  • Breiteneder H. Protein families: implications for allergen nomenclature, standardisation and specific immunotherapy. Arb Paul Ehrlich Inst Bundesinstitut Impfstoffe BiomedArzneim Langen Hess. 2009;96:249–54; discussion 254–246.

    Google Scholar 

  • Breiteneder H, Radauer C. A classification of plant food allergens. J Allergy Clin Immunol. 2004;113:821–30; quiz 831.

    Article  CAS  PubMed  Google Scholar 

  • Chapman MD. Allergen nomenclature. Clin Allergy Immunol. 2004;18:51–64.

    CAS  PubMed  Google Scholar 

  • Chapman MD. Allergen nomenclature. Clin Allergy Immunol. 2008;21:47–58.

    CAS  PubMed  Google Scholar 

  • Ferreira F, Wolf M, Wallner M. Molecular approach to allergy diagnosis and therapy. Yonsei Med J. 2014;55:839–52.

    Article  PubMed  PubMed Central  Google Scholar 

  • Haftenberger M, Laussmann D, Ellert U, Kalcklosch M, Langen U, Schlaud M, Schmitz R, Thamm M. Prevalence of sensitisation to aeraoallergens and food allergens: results of the German Health Interview and Examination Survey for Adults (DEGS1). Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz. 2013;56:687–97.

    Article  CAS  PubMed  Google Scholar 

  • Hatzler L, Panetta V, Lau S, Wagner P, Bergmann RL, Illi S, Bergmann KE, Keil T, Hofmaier S, Rohrbach A, Bauer CP, Forster J, Hoffman U, Zepp F, Schuster A, Wahn U, Matricardi PM. Molecular spreading and predictive value of preclinical IgE response to Phleum pratense in children with hay fever. J Allergy Clin Immunol. 2012;130:894–901.

    Article  CAS  PubMed  Google Scholar 

  • Jenkins JA, Breiteneder H, Mills EN. Evolutionary distance from human homologs reflects allergenicity of animal food proteins. J Allergy Clin Immunol. 2007;120:1399–405.

    Article  CAS  PubMed  Google Scholar 

  • Jutel M, Jaeger L, Suck R, Meyer H, Fiebig H, Cromwell O. Allergen-specific immunotherapy with recombinant grass pollen allergens. J Allergy Clin Immunol. 2005;116:608–13.

    Article  CAS  PubMed  Google Scholar 

  • Jutel M, Solarewicz-Madejek K, Smolinska S. Recombinant allergens: the present and the future. Hum Vaccin Immunother. 2012;8:1534–43.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Karp CL. Guilt by intimate association: what makes an allergen an allergen? J Allergy Clin Immunol. 2010;125:955–60; quiz 961–952.

    Article  PubMed  PubMed Central  Google Scholar 

  • Kauffman HF, Tamm M, Timmerman JA, Borger P. House dust mite major allergens Der p 1 and Der p 5 activate human airway-derived epithelial cells by protease-dependent and protease-independent mechanisms. Clin Mol Allergy. 2006;4:5.

    Article  PubMed  PubMed Central  Google Scholar 

  • King TP, Hoffman D, Lowenstein H, Marsh DG, Platts-Mills TA, Thomas W. Allergen nomenclature. Allergy. 1995;50:765–74.

    Article  CAS  PubMed  Google Scholar 

  • Kleine-Tebbe J, Ollert M, Jakob T. Molekulare Allergologie: Nomenklatur, Proteinfamilien, Datenbanken und potenzieller Nutzen. Allergo J. 2010;19:390–4.

    Article  Google Scholar 

  • Makatsori M, Pfaar O, Lleonart R, Calderon MA. Recombinant allergen immunotherapy: clinical evidence of efficacy – a review. Curr Allergy Asthma Rep. 2013;13:371–80.

    Article  CAS  PubMed  Google Scholar 

  • Mari A, Scala E. Allergome: a unifying platform. Arb Paul Ehrlich Inst Bundesamt Sera Impfstoffe Frankf A M. 2006;95:29–39; discussion 39–40.

    Google Scholar 

  • Marsh DG, Goodfriend L, King TP, Løwenstein H, Platts-Mills TA. Allergen nomenclature. Bull World Health Organ. 1986;64:767–74.

    CAS  PubMed  PubMed Central  Google Scholar 

  • Matricardi PM, Kleine-Tebbe J, Hoffmann HJ, Valenta R, Hilger C, Hofmaier S, Aalberse RC, Agache I, Asero R, Ballmer-Weber B, Barber D, Beyer K, Biedermann T, Biló MB, Blank S, Bohle B, Bosshard PP, Breiteneder H, Brough HA, Caraballo L, Caubet JC, Crameri R, Davies JM, Douladiris N, Ebisawa M, Eigenmann PA, Fernandez-Rivas M, Ferreira F, Gadermaier G, Glatz M, Hamilton RG, Hawranek T, Hellings P, Hoffmann-Sommergruber K, Jakob T, Jappe U, Jutel M, Kamath SD, Knol EF, Korosec P, Kuehn A, Lack G, Lopata AL, Mäkelä M, Morisset M, Niederberger V, Nowak-Wezgrzyn AH, Papadopoulos NG, Pastorello EA, Pauli G, Platts-Mills T, Posa D, Poulsen LK, Raulf M, Sastre J, Scala E, Schmid JM, Schmid-Grendelmeier P, van Hage M, van Ree R, Vieths S, Weber R, Wickman M, Muraro A, Ollert M. EAACI molecular allergology user’s guide. Pediatr Allergy Immunol. 2016;27(Suppl23):1–250.

    Article  PubMed  Google Scholar 

  • Meyer W, Narkus A, Salapatek AM, Hafner D. Double-blind, placebo-controlled, dose-ranging study of new recombinant hypoallergenic Bet v 1 in an environmental exposure chamber. Allergy. 2013;68:724–31.

    Article  CAS  PubMed  Google Scholar 

  • Poulsen LK. What makes an allergen more than an allergen? Clin Exp Allergy. 2009;39:623–5.

    Article  CAS  PubMed  Google Scholar 

  • Radauer C, Bublin M, Wagner S, Mari A, Breiteneder H. Allergens are distributed into few protein families and possess a restricted number of biochemical functions. J Allergy Clin Immunol. 2008;121:847–52 e847.

    Article  CAS  PubMed  Google Scholar 

  • Radauer C, Nandy A, Ferreira F, Goodman RE, Larsen JN, Lidholm J, Pomes A, Raulf-Heimsoth M, Rozynek P, Thomas WR, Breiteneder H. Update of the WHO/IUIS Allergen Nomenclature Database based on analysis of allergen sequences. Allergy. 2014;69:413–9.

    Article  CAS  PubMed  Google Scholar 

  • Scala E, Alessandri C, Bernardi ML, Ferrara R, Palazzo P, Pomponi D, Quaratino D, Rasi C, Zaffiro A, Zennaro D, Mari A. Cross-sectional survey on immunoglobulin E reactivity in 23,077 subjects using an allergenic molecule-based microarray detection system. Clin Exp Allergy. 2010;40:911–21.

    Article  CAS  PubMed  Google Scholar 

  • Schmitz R, Ellert U, Kalcklosch M, Dahm S, Thamm M. Patterns of sensitization to inhalant and food allergens – findings from the German Health Interview and Examination Survey for Children and Adolescents. Int Arch Allergy Immunol. 2013;162:263–70.

    Article  CAS  PubMed  Google Scholar 

  • Sircar G, Sarkar D, Bhattacharya SG, Saha S. Allergen databases. Methods Mol Biol. 2014;1184:165–81.

    Article  PubMed  Google Scholar 

  • van Ree R, Chapman MD, Ferreira F, Vieths S, Bryan D, Cromwell O, Villalba M, Durham SR, Becker WM, Aalbers M, Andre C, Barber D, CisteroBahima A, Custovic A, Didierlaurent A, Dolman C, Dorpema JW, Di Felice G, Eberhardt F, Fernandez Caldas E, et al. The CREATE project: development of certified reference materials for allergenic products and validation of methods for their quantification. Allergy. 2008;63:310–26.

    Article  PubMed  Google Scholar 

  • Vieths S, Barber D, Chapman M, Costanzo A, Daas A, Fiebig H, Hanschmann KM, Hrabina M, Kaul S, Ledesma A, Moingeon P, Reese G, Schorner C, van Ree R, Weber B, Buchheit KH. Establishment of recombinant major allergens Bet v 1 and Phl p 5a as Ph. Eur. reference standards and validation of ELISA methods for their measurement. Results from feasibility studies. Pharmeur Bio Sci Notes. 2012;2012:118–34.

    CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to J. Kleine-Tebbe MD, Prof .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2017 Springer International Publishing Switzerland

About this chapter

Cite this chapter

Kleine-Tebbe, J., Ollert, M., Radauer, C., Jakob, T. (2017). Introduction to Molecular Allergology: Protein Families, Databases, and Potential Benefits. In: Kleine-Tebbe, J., Jakob, T. (eds) Molecular Allergy Diagnostics. Springer, Cham. https://doi.org/10.1007/978-3-319-42499-6_1

Download citation

  • DOI: https://doi.org/10.1007/978-3-319-42499-6_1

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-42498-9

  • Online ISBN: 978-3-319-42499-6

  • eBook Packages: MedicineMedicine (R0)

Publish with us

Policies and ethics