Skip to main content

Molecular Typing of Coxiella burnetii: A Review of Available Methods with Major Focus on PCR-Based Techniques

  • Chapter
  • First Online:
Molecular Typing in Bacterial Infections

Part of the book series: Infectious Disease ((ID))

  • 2219 Accesses

Abstract

Coxiella burnetii, a strict intracellular Gram-negative bacterium, is the etiological agent of Q fever. The disease is a widespread zoonosis and is endemic throughout the world. An easy aerosol dissemination, environmental persistence, and high infectivity make the bacterium a serious threat for humans and animals, and therefore, its rapid and reliable detection and identification are of utmost importance. With the introduction of molecular techniques, remarkable improvements in the diagnostic capabilities of C. burnetii have been achieved although serological methods still play a vital role in human and animal screening. Availability of the whole genome sequence data of the bacterium has enabled the design and application of high-resolution molecular typing systems, which are briefly described in this chapter. The systematic genotyping of C. burnetii isolates will enhance our ability to identify the source of infections and consequently help to reduce the number of cases in natural outbreaks or deliberate release events.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 179.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 229.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Seshadri R, Paulsen IT, Eisen JA et al (2003) Complete genome sequence of the Q-fever pathogen Coxiella burnetii. Proc Natl Acad Sci USA 100:5455–5460

    Article  PubMed  CAS  Google Scholar 

  2. Marrie TJ, Raoult D (1997) Q fever – a review and issues for the next century. Int J Antimicrob Agents 8:145–161

    Article  PubMed  CAS  Google Scholar 

  3. Arricau-Bouvery N, Rodolakis A (2005) Is Q fever an emerging or re-emerging zoonosis? Vet Res 36:327–349

    Article  PubMed  CAS  Google Scholar 

  4. Madariaga MG, Rezai K, Trenholme GM et al (2003) Q fever: a biological weapon in your backyard. Lancet Infect Dis 3:709–721

    Article  PubMed  Google Scholar 

  5. Maurin M, Raoult D (1999) Q Fever. Clin Microbiol Rev 12:518–553

    PubMed  CAS  Google Scholar 

  6. Slaba K, Skultety L, Toman R (2005) Efficiency of various serological techniques for diagnosing Coxiella burnetii infection. Acta Virol 49:123–127

    PubMed  CAS  Google Scholar 

  7. Mallavia LP, Samuel JE, Frazier ME (1991) The genetics of Coxiella burnetii, etiologic agent of Q fever and chronic endocarditis. In: Williams JC, Thompson HA (eds) Q fever: the biology of Coxiella burnetii, 1st edn. CRC, Boca Raton, FL

    Google Scholar 

  8. Valkova D, Kazar J (1995) A new plasmid (QpDV) common to Coxiella burnetii isolates associated with acute and chronic Q fever. FEMS Microbiol Lett 125:275–280

    Article  PubMed  CAS  Google Scholar 

  9. Thiele D, Willems H (1994) Is plasmid based differentiation of Coxiella burnetii in ‘acute’ and ‘chronic’ isolates still valid? Eur J Epidemiol 10:427–434

    Article  PubMed  CAS  Google Scholar 

  10. Heinzen R, Stiegler GL, Whiting LL et al (1990) Use of pulsed field gel electrophoresis to differentiate Coxiella burnetii strains. Ann N Y Acad Sci 590:504–513

    Article  PubMed  CAS  Google Scholar 

  11. Hendrix L, Samuel J, Mallavia L (1991) Differentiation of Coxiella burnetii isolates by analysis of restriction-endonuclease-digested DNA separated by SDS-PAGE. J Gen Microbiol 137:269–276

    Article  PubMed  CAS  Google Scholar 

  12. Thiele D, Willems H, Köpf G et al (1993) Polymorphism in DNA restriction patterns of Coxiella burnetii isolates investigated by pulsed field gel electrophoresis and image analysis. Eur J Epidemiol 9:419–425

    Article  PubMed  CAS  Google Scholar 

  13. Jäger C, Willems H, Thiele D et al (1998) Molecular characterization of Coxiella burnetii isolates. Epidemiol Infect 120:157–164

    Article  PubMed  Google Scholar 

  14. Stein A, Raoult D (1992) Detection of Coxiella burnetii by DNA amplification using polymerase chain reaction. J Clin Microbiol 30:2462–2466

    PubMed  CAS  Google Scholar 

  15. Spitalska E, Kocianova E (2003) Detection of Coxiella burnetii in ticks collected in Slovakia and Hungary. Eur J Epidemiol 18:263–266

    Article  PubMed  CAS  Google Scholar 

  16. Ibrahim A, Norlander L, Macellaro A et al (1997) Specific detection of Coxiella burnetii through partial amplification of 23S rDNA. Eur J Epidemiol 13:329–334

    Article  PubMed  CAS  Google Scholar 

  17. Willems H, Thiele D, Frolich-Ritter R et al (1994) Detection of Coxiella burnetii in cow’s milk using the polymerase chain reaction (PCR). Zentralbl Veterinarmed B 41:580–587

    PubMed  CAS  Google Scholar 

  18. Lorenz H, Jäger C, Willems H et al (1998) PCR detection of Coxiella burnetii from different clinical specimens, especially bovine milk, on the basis of DNA preparation with a silica matrix. Appl Environ Microbiol 64:4234–4237

    PubMed  CAS  Google Scholar 

  19. Vaidya VM, Malik SVS, Kaur S et al (2008) Comparison of PCR, immunofluorescence assay, and pathogen isolation for diagnosis of Q fever in humans with spontaneous abortions. J Clin Microbiol 46:2038–2044

    Article  PubMed  CAS  Google Scholar 

  20. Kato K, Arashima Y, Asai S et al (1998) Detection of Coxiella burnetii specific DNA in blood samples from Japanese patients with chronic nonspecific symptoms by nested polymerase chain reaction. FEMS Immunol Med Microbiol 21:139–144

    Article  PubMed  CAS  Google Scholar 

  21. Zhang GQ, Hotta A, Mizutani M et al (1998) Direct identification of Coxiella burnetii plasmids in human sera by nested PCR. J Clin Microbiol 36:2210–2213

    PubMed  CAS  Google Scholar 

  22. Stemmler M, Meyer H (2002) Rapid and specific detection of Coxiella burnetii by LightCycler-PCR. In: Reischl U, Wittwer C, Cockerill F (eds) Rapid Cycle real-time PCR: methods and applications; microbiology and food analysis. Springer, Berlin, pp 149–154

    Google Scholar 

  23. Fenollar F, Fournier PE, Raoult D (2004) Molecular detection of Coxiella burnetii in the sera of patients with Q fever endocarditis or vascular infection. J Clin Microbiol 42:4919–4924

    Article  PubMed  CAS  Google Scholar 

  24. Brennan RE, Samuel JE (2003) Evaluation of Coxiella burnetii antibiotic susceptibilities by real-time PCR assay. J Clin Microbiol 41:1869–1874

    Article  PubMed  CAS  Google Scholar 

  25. Kunchev M, Alexandrov E, Kamarinchev B et al (2007) Effective LUX (Light Upon eXtension) primer system for early and rapid detection of Coxiella burnetii. Biotechnol Biotech Eq 21:338–340

    CAS  Google Scholar 

  26. Harris RJ, Storm PA, Lloyd A et al (2000) Long-term persistence of Coxiella burnetii in the host after primary Q fever. Epidemiol Infect 124:543–549

    Article  PubMed  CAS  Google Scholar 

  27. Marmion BP, Storm PA, Ayres JG et al (2005) Long-term persistence of Coxiella burnetii after acute primary Q fever. Q J Med 98:7–20

    Article  CAS  Google Scholar 

  28. Rolain JM, Raoult D (2005) Molecular detection of Coxiella burnetii in blood and sera during Q fever. Q J Med 98:615–621

    Article  Google Scholar 

  29. Zhang J, Wen B, Chen M et al (2005) Balb/c mouse model and real-time quantitative polymerase chain reaction for evaluation of the immunoprotectivity against Q fever. Ann N Y Acad Sci 1063:171–175

    Article  PubMed  CAS  Google Scholar 

  30. Coleman SA, Fischer ER, Howe D et al (2004) Temporal analysis of Coxiella burnetii morphological differentiation. J Bacteriol 186:7344–7352

    Article  PubMed  CAS  Google Scholar 

  31. Glazunova O, Roux V, Freylikman O et al (2005) Coxiella burnetii genotyping. Emerg Infect Dis 11:1211–1217

    PubMed  CAS  Google Scholar 

  32. Chmielewski T, Sidi-Boumedine K, Duquesne V et al (2009) Molecular epidemiology of Q fever in Poland. Pol J Microbiol 58:9–13

    PubMed  CAS  Google Scholar 

  33. Arricau-Bouvery N, Hauck Y, Bejaoui A et al (2006) Molecular characterization of Coxiella burnetii isolates by infrequent restriction site-PCR and MLVA typing. BMC Microbiol. http://www.biomedcentral.com/1471-2180/6/38. Accessed 6 Nov

  34. Svraka S, Toman R, Skultety L et al (2006) Establishment of a genotyping scheme for Coxiella burnetii. FEMS Microbiol Lett 254:268–274

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

This work was supported in part by the grants No. 2/0061/13 and 2/0026/12 of the Scientific Grant Agency of Ministry of Education of Slovak Republic and the Slovak Academy of Sciences.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to R. Toman .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2013 Springer Science+Business Media New York

About this chapter

Cite this chapter

Boldis, V., Spitalska, E., Toman, R. (2013). Molecular Typing of Coxiella burnetii: A Review of Available Methods with Major Focus on PCR-Based Techniques. In: de Filippis, I., McKee, M. (eds) Molecular Typing in Bacterial Infections. Infectious Disease. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-185-1_26

Download citation

  • DOI: https://doi.org/10.1007/978-1-62703-185-1_26

  • Published:

  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-62703-184-4

  • Online ISBN: 978-1-62703-185-1

  • eBook Packages: MedicineMedicine (R0)

Publish with us

Policies and ethics