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Purification of Recombinant DHHC Proteins Using an Insect Cell Expression System

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Protein Lipidation

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2009))

Abstract

DHHC enzymes are a family of integral membrane proteins that catalyze the posttranslational addition of palmitate, a 16-carbon fatty acid, onto a cysteine residue of a protein. While the library of identified palmitoylated proteins has grown tremendously over the years, biochemical and mechanistic studies on DHHC proteins are challenged by the innate difficulty of purifying the enzyme in large amounts. Here we describe our protocol for preparing recombinant DHHC proteins tagged with a hexahistidine sequence and a FLAG epitope that aid in the purification. This procedure has been tested successfully in purifying several members of the enzyme family; DHHC3 and its catalytically inactive cysteine mutant, DHHS3 are used as examples. The recombinant protein is extracted from whole cell lysates using the detergent dodecylmaltoside (DDM) and is subjected to a two-column purification. Homogeneity and monodispersity of the purified protein are checked by size exclusion chromatography (SEC). A preparation from a 400-mL infection of Sf9 insect cell culture typically yields 0.5 mg of DHHC3 and 1.0 mg of catalytically inactive DHHS3. Both forms appear monodisperse up to a concentration of 1 mg/mL by SEC.

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References

  1. Sanja B, Mathieu B, Gisou GF (2013) What does S-palmitoylation do to membrane proteins? FEBS J 280(12):2766–2774

    Article  Google Scholar 

  2. Blanc M et al (2015) SwissPalm: Protein Palmitoylation database [version 1; referees: 3 approved]. F1000Res 4:261

    Article  Google Scholar 

  3. Lobo S et al (2002) Identification of a Ras Palmitoyltransferase in Saccharomyces cerevisiae. J Biol Chem 277(43):41268–41273

    Article  CAS  Google Scholar 

  4. Roth AF et al (2002) The yeast DHHC cysteine-rich domain protein Akr1p is a palmitoyl transferase. J Cell Biol 159(1):23–28

    Article  CAS  Google Scholar 

  5. Zhang MM et al (2013) Quantitative control of protein S-palmitoylation regulates meiotic entry in fission yeast. PLoS Biol 11(7):e1001597

    Article  CAS  Google Scholar 

  6. Mitchell DA et al (2006) Thematic review series: lipid posttranslational modifications. Protein palmitoylation by a family of DHHC protein S-acyltransferases. J Lipid Res 47(6):1118–1127

    Article  CAS  Google Scholar 

  7. Gottlieb CD, Linder ME (2017) Structure and function of DHHC protein S−acyltransferases. Biochem Soc Trans 45(4):923–928

    Article  CAS  Google Scholar 

  8. Politis EG, Roth AF, Davis NG (2005) Transmembrane topology of the protein palmitoyl transferase Akr1. J Biol Chem 280(11):10156–10163

    Article  CAS  Google Scholar 

  9. Mitchell DA et al (2010) Mutational analysis of Saccharomyces cerevisiae Erf2 reveals a two-step reaction mechanism for protein palmitoylation by DHHC enzymes. J Biol Chem 285(49):38104–38114

    Article  CAS  Google Scholar 

  10. Jennings BC, Linder ME (2012) DHHC protein S-acyltransferases use similar ping-pong kinetic mechanisms but display different acyl-CoA specificities. J Biol Chem 287(10):7236–7245

    Article  CAS  Google Scholar 

  11. González Montoro A, Chumpen Ramirez S, Valdez Taubas J (2015) The canonical DHHC motif is not absolutely required for the activity of the yeast S-acyltransferases Swf1 and Pfa4. J Biol Chem 290(37):22448–22459

    Article  Google Scholar 

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Acknowledgements

This work was supported by the National Institutes of Health (R01 GM121540).

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Correspondence to Maurine E. Linder .

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Malgapo, M.I.P., Linder, M.E. (2019). Purification of Recombinant DHHC Proteins Using an Insect Cell Expression System. In: Linder, M. (eds) Protein Lipidation. Methods in Molecular Biology, vol 2009. Humana, New York, NY. https://doi.org/10.1007/978-1-4939-9532-5_14

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  • DOI: https://doi.org/10.1007/978-1-4939-9532-5_14

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  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-4939-9531-8

  • Online ISBN: 978-1-4939-9532-5

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