Abstract
Microsomes are vesicles derived from the endoplasmic reticulum (ER) when cells are broken down in the lab. These microsomes are a valuable tool to study a variety of ER functions such as protein and lipid synthesis in vitro.
Here we describe a protocol to isolate ER-derived microsomes Arabidopsis thaliana seedlings and exemplify the use of these purified microsomes in enzyme assays with the auxin precursors tryptophan (Trp) or indole-3-pyruvic acid (IPyA) to quantify auxin synthetic capacity in microsomal and cytosolic fractions.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Alberts B, Johnson A, Lewis J, Morgan D, Raff M, Roberts K, Walter P (2014) Molecular biology of the cell, 6th edn. Garland Science, New York
Nagahashi J, Hiraike K (1982) Effects of centrifugal force and centrifugation time on the sedimentation of plant organelles. Plant Physiol 69:546–548
Tobin AK, Bowsher CG (2004) Subcellular fractionation of plant tissues: isolation of plastids and mitochondria. Methods Mol Biol 244:53–63
Kriechbaumer V, Shaw R, Mukherjee J, Bowsher CG, Harrison AM, Abell BM (2009) Subcellular distribution of tail-anchored proteins in Arabidopsis. Traffic 10:1753–1764
Claude A (1943) The constitution of protoplasm. Science 97:451–456
Claude A (1944) The constitution of mitochondria and microsomes, and the distribution of nucleic acid in the cytoplasm of a leukemic cell. J Exp Med 144(80):19–29
Yao Z, Zhou H, Figeys D, Wang Y, Sundaram M (2013) Microsome-associated lumenal lipid droplets in the regulation of lipoprotein secretion. Curr Opin Lipidol 24:160–170
Clausen M, Kannangara RM, Olsen CE, Blomstedt CK, Gleadow RM, Jørgensen K, Bak S, Motawie MS, Møller BL (2015) The bifurcation of the cyanogenic glucoside and glucosinolate biosynthetic pathways. Plant J 84:558–573
Kriechbaumer V, Seo H, Park WJ, Hawes C (2015) Endoplasmic reticulum localization and activity of maize auxin biosynthetic enzymes. J Exp Bot 66:6009–6020
Kriechbaumer V, Botchway SW, Hawes C (2016a) Localization and interactions between Arabidopsis auxin biosynthetic enzymes in the TAA/YUC-dependent pathway. J Exp Bot 67:4195–4207
Kriechbaumer V (2016b) ER microsome preparation and subsequent IAA quantification in maize coleoptile and primary root tissue. Bio-protocol 6(9):e1805
Walter P, Blobel G (1983) Preparation of microsomal membranes for cotranslational protein translocation. Methods Enzymol 96:84–89
Jackson R, Hunt T (1983) Preparation and use of nuclease-treated rabbit reticulocyte lysates for the translation of eukaryotic messenger RNA. Methods Enzymol 96:50–74
Erickson AH, Blobel G (1983) Cell-free translation of messenger RNA in a wheat germ system. Methods Enzymol 96:38–50
Abell BM, Holbrook LA, Abenes M, Murphy DJ, Hills MJ, Moloney MM (1997) Role of the proline knot motif in oleosin endoplasmic reticulum topology and oil body targeting. Plant Cell 9:1481–1493
ZhaoY CSK, Fankhauser C, Cashman JR, Cohen JD, Weigel D, Chory J (2001) A role for flavin monooxygenase-like enzymes in auxin biosynthesis. Science 291:306–309
Stepanova AN, Robertson-Hoyt J, Yun J, Benavente LM, Xie DY, Dolezal K, Schlereth A, Jürgens G, Alonso JM (2008) TAA1-mediated auxin biosynthesis is essential for hormone crosstalk and plant development. Cell 133:177–191
Acknowledgments
This work was supported by a research scholarship from the Korean Federation of Science and Technology Societies (KOFST) awarded to Dr. Verena Kriechbaumer and the British Biotechnology and Biological Sciences Research Council (grant no. BB/J004987/1 research grant) awarded to CH.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2024 The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature
About this protocol
Cite this protocol
Kriechbaumer, V. (2024). Preparation of ER Microsomes from Arabidopsis thaliana. In: Kriechbaumer, V. (eds) The Plant Endoplasmic Reticulum. Methods in Molecular Biology, vol 2772. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-3710-4_9
Download citation
DOI: https://doi.org/10.1007/978-1-0716-3710-4_9
Published:
Publisher Name: Humana, New York, NY
Print ISBN: 978-1-0716-3709-8
Online ISBN: 978-1-0716-3710-4
eBook Packages: Springer Protocols