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Computational Biomedicine (CompBioMed) Centre of Excellence: Selected Key Achievements

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High Performance Computing for Drug Discovery and Biomedicine

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2716))

Abstract

CompBioMed is a Centre of Excellence for High Performance Computing Applications, funded by the European Commission’s Horizon 2020 program, running from October 1, 2017, to April 1, 2024. CompBioMed develops computer-based tools to simulate each human body in health and disease. The author provides a general overview and then presents his personal opinion on key achievements: collaborations between industry and academia, the two IMAX short films, training to foster a culture of HPC among biomedical practitioners, our free service to port and tune biomedical applications to HPC, providing future supercomputers access to surgery, and bringing FDA-endorsed credibility to biomedical simulations.

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References

  1. EPCC (2023). https://www.epcc.ed.ac.uk. Accessed 5 Apr 2023

  2. CompBioMed (2023). https://www.compbiomed.eu. Accessed 5 Apr 2023

  3. Horizon2020 (2020). https://research-and-innovation.ec.europa.eu/funding/funding-opportunities/funding-programmes-and-open-calls/horizon-2020_en. Accessed 5 Apr 2023

  4. VPH Institute (2023). https://www.vph-institute.org. Accessed 5 Apr 2023

  5. CompBioMed (2021) CompBioMed phase 1 core partners. https://www.compbiomed.eu/about/core-partners-new. Accessed 5 Apr 2023

  6. CompBioMed (2023) CompBioMed phase 2 core partners. https://www.compbiomed.eu/about/compbiomed2-core-partners. Accessed 5 Apr 2023

  7. CompBioMed (2023) CompBioMed associate partners. https://www.compbiomed.eu/associate-partners. Accessed 5 Apr 2023

  8. CompBioMed (2023) CompBioMed software hub. https://www.compbiomed.eu/compbiomed-software-hub. Accessed 5 Apr 2023

  9. CompBioMed (2021) CompBioMed external expert advisory board. https://www.compbiomed.eu/innovation/external-expert-advisory-board. Accessed 5 Apr 2023

  10. Elem biotech (2023). https://www.elem.bio. Accessed 5 Apr 2023

  11. Medtronic (2023). https://www.medtronic.com/uk-en/index.html. Accessed 5 Apr 2023

  12. iVascular (2023). https://ivascular.global. Accessed 5 Apr 2023

  13. CompBioMed (2018) CompBioMed virtual humans film. https://www.youtube.com/watch?v=1FvRSJ9W734. Accessed 5 Apr 2023

  14. CompBioMed (2023) CompBioMed e-seminar series. https://www.compbiomed.eu/compbiomed-e-seminars. Accessed 5 Apr 2023

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  18. Pringle GJ et al (2023) Rough guide to preparing software for Exascale. https://www.compbiomed.eu/rough-guide-to-preparing-software-for-exascale. Accessed 5 Apr 2023

  19. EXCELLERAT (2023) EXCELLERAT P2 the European Centre of Excellence for Engineering Applications. https://www.excellerat.eu. Accessed 5 Apr 2023

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  22. EUDAT (2020) EUDAT B2SAFE. https://www.eudat.eu/b2safe. Accessed 5 Apr 2023

  23. The American Society of Mechanical Engineers (2018) Assessing credibility of computational modeling through verification and validation: application to medical devices, V&V 40. https://www.asme.org/codes-standards/find-codes-standards/v-v-40-assessing-credibility-computational-modeling-verification-validation-application-medical-devices. Accessed 5 Apr 2023

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Author information

Authors and Affiliations

  1. EPCC, University of Edinburgh, Bayes Centre, Edinburgh, UK

    Gavin J. Pringle

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  1. Gavin J. Pringle
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Correspondence to Gavin J. Pringle .

Editor information

Editors and Affiliations

  1. In Silico Research and Development, Evotec UK Ltd, Abingdon, UK

    Alexander Heifetz

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© 2024 The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature

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Pringle, G.J. (2024). Computational Biomedicine (CompBioMed) Centre of Excellence: Selected Key Achievements. In: Heifetz, A. (eds) High Performance Computing for Drug Discovery and Biomedicine. Methods in Molecular Biology, vol 2716. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-3449-3_3

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  • DOI: https://doi.org/10.1007/978-1-0716-3449-3_3

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  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-3448-6

  • Online ISBN: 978-1-0716-3449-3

  • eBook Packages: Springer Protocols

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