Abstract
The class Eurotiomycetes (Ascomycota, Pezizomycotina) comprises important fungi used for medical, agricultural, industrial and scientific purposes. Eurotiomycetes is a morphologically and ecologically diverse monophyletic group. Within the Eurotiomycetes, different ascoma morphologies are found including cleistothecia and perithecia but also apothecia or stromatic forms. Mazaediate representatives (with a distinct structure in which loose masses of ascospores accumulate to be passively disseminated) have evolved independently several times. Here we describe a new mazaediate species belonging to the Eurotiomycetes. The multigene phylogeny produced (7 gene regions: nuLSU, nuSSU, 5.8S nuITS, mtSSU, RPB1, RPB2 and MCM7) placed the new species in a lineage sister to Eurotiomycetidae. Based on the evolutionary relationships and morphology, a new subclass, a new order, family and genus are described to place the new species: Cryptocalicium blascoi. This calicioid species occurs on the inner side of loose bark strips of Cupressaceae (Cupressus, Juniperus). Morphologically, C. blascoi is characterized by having minute apothecioid stalked ascomata producing mazaedia, clavate bitunicate asci with hemiamyloid reaction, presence of hamathecium and an apothecial external surface with dark violet granules that becomes turquoise green in KOH. The ancestral state reconstruction analyses support a common ancestor with open ascomata for all deep nodes in Eurotiomycetes and the evolution of closed ascomata (cleistothecioid in Eurotiomycetidae and perithecioid in Chaetothyriomycetidae) from apothecioid ancestors. The appropriateness of the description of a new subclass for this fungus is also discussed.
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Introduction
Eurotiomycetes (Pezizomycotina, Ascomycota) is one of the most diverse groups of fungi concerning morphology and ecology (Geiser et al. 2006). Trophic modes in Eurotiomycetes are varied: saprotrophic, biotrophic, lichen mycobionts, ectomycorrhizal and endophytes (Chen et al. 2015). Different ascoma types (e.g. apothecioid, perithecioid, cleistothecioid, mazaediate) are found in the group (Jaklitsch et al. 2016). Eurotiomycetes includes many species important to human health, industry and basic research (e.g. Alexopoulous et al. 1996; Geiser et al. 2006). The great majority of human pathogenic Pezizomycotina are members of Eurotiomycetes and particularly from Eurotiales, Onygenales and Chaetothyriales (Alexopoulous et al. 1996; Jaklitsch et al. 2016).
Phylogenetic studies have contributed to unravel the evolutionary relationships within the class (e.g. Geiser et al. 2006; Wood et al. 2016; Réblová et al. 2017) and have been used to re-classify taxa accordingly. Recently, a new order and two subclasses have been described (Chen et al. 2015; Gueidan et al. 2014; Wood et al. 2016; Réblová et al. 2017) in the Eurotiomycetes. Current problems in the classification of families and orders within this class are the high amount of unknown or undescribed species (Chen et al. 2015), the high presence of species only known from their anamorph (Gibas et al. 2002a; Stchigel et al. 2013), un-assigned paraphyletic taxa (Gueidan et al. 2014) or limited availability of sequence data (Quan et al. 2020). Currently, Eurotiomycetes is generally accepted to comprise 5 subclasses: Chaetothyriomycetidae, Coryneliomycetidae, Eurotiomycetidae, Mycocaliciomycetidae and Sclerococcomycetidae (Dowell 2001; Geiser et al. 2006; Hibbett et al. 2007; Wood et al. 2016; Réblová et al. 2017).
Eurotiomycetidae encompasses three morphologically diverse orders: Arachnomycetales, Eurotiales and Onygenales. Eriksson (1999) classified these orders in the Eurotiomycetes, but they were instead treated as Plectomycetes by Geiser and LoBuglio (2001). Members of Eurotiomycetidae produce different ascoma types including cleistothecia, ascostromata or gymnothecia (Currah 1985, Gibas et al. 2002a, Hibbett et al. 2007, Jaklitsch et al. 2016). In Eurotiomycetidae, asci are usually evanescent, sometimes bitunicate, scattered throughout the ascoma without hamathecium elements and with eight ascospores (Hibbett et al. 2007). They include mostly saprophytic species, and some produce toxic and economically important secondary metabolites, food fermentation enzymes, or are used as genetic models, as Aspergillus nidulans (Jaklitsch et al. 2016). Animal-associated fungi are also known (pathogens of vertebrates in Onygenales, Jaklitsch et al. 2016). Chaetothyriomycetidae includes the common black yeast fungi, some of which are pathogens of humans and animals, but also contains lichenized groups and endophytes (Gueidan et al. 2014; Chen et al. 2015). Within this subclass, members of Verrucariales, Chaetothyriales and Pyrenulales are characterized by having perithecial ascomata and bitunicate or secondarily prototunicate asci with a dehiscence ranging from fissitunicate to evanescent and presence of hamathecium structure, producing pseudoparaphyses or periphysoids (Barr 1983). Phaeomoniellales, sister to the clade including Verrucariales and Chaetothyriales, comprises mainly endophytes and plant pathogens with perithecial ascomata when sexual states are present (Chen et al. 2015). Mycocaliciomycetidae includes non-lichenized members of the families Mycocaliciaceae and Sphinctrinaceae (Mycocaliciales, Tibell and Wedin 2000). They produce stalked or sessile apothecial ascomata, and spore dispersal is active or passive when the ascomata develop a mazaedium. Asci are unitunicate, cylindrical, mostly with a distinctly thickened apex and with 8 spores. Members of Mycocaliciomycetidae are parasites or commensals on lichenized or saprotrophic fungi. The new subclass Coryneliomycetidae was introduced by Wood et al. (2016) for the Coryneliaceae. Most members of this group form pseudothecial mazaedial ascomata, with initially bitunicate asci in which the outer wall disintegrates (prototunicate) and the ascospores finally accumulate as a dry mass at the ascoma beak (Johnston and Minter 1989; Geiser et al. 2006); but not all are mazaediate (Garrido-Benavent and Pérez-Ortega 2015). They are mostly biotrophic on leaves and stems, especially on Podocarpaceae in the southern hemisphere with some northern temperate species that occur on conifers (Garrido-Benavent and Pérez-Ortega 2015). Although the Sclerococcum-Dactylospora lineage was recovered as a distinct lineage in the broad multigene phylogenies by Schoch et al. (2009) and Chen et al. (2015), Sclerococcomycetidae was first formally recognized by Réblová et al. (2017) including in it the single order Sclerococcales. Later, Dactylospora was merged with Sclerococcum based on the close phylogenetic relationship of their type species (Diederich et al. 2018; Olariaga et al. 2019). Members of this subclass are characterized by apothecial ascomata with unitunicate, non-amyloid asci, covered with an amyloid or hemiamyloid gelatinous cap. The hamathecium consists of persistent pseudoparaphyses. They are non-lichenized, terrestrial, marine, bryophytic, corticolous, lignicolous, lichenicolous or are associated with beetles as a part of their intestinal microbiota. Olariaga et al. (2019) also pointed out the existence of several dematiaceous phialidic fungi within this clade, several strains isolated from digestive tracts of beetles and a new aquatic hyphomycete. Thus, more hyphomycetes are likely to belong to the Sclerococcomycetidae.
Most higher-level Ascomycota systematics hypotheses are based on ascoma type (Nannfeldt 1932; Luttrell 1955; Henssen and Jahns 1974) and ascus morphology and dehiscence (Luttrell 1951; Eriksson 1981; Hafellner 1984). Ancestral character state reconstruction analyses can provide valuable insights to understand the evolution (Schmitt et al. 2009a; Joy et al. 2016) of groups that are prone to shifts in ecological and morphological character states as the Eurotiomycetes (Geiser et al. 2006; Schoch et al. 2009). Regarding ascomata, ancestral state reconstruction analyses support the ancestor of Ascomycota as producing apothecia and show multiple transitions from apothecioid to perithecioid and cleistothecioid ascomata (Schoch et al. 2009), as Nannfeldt (1932) previously hypothesized. In the Eurotiomycetes, the ancestor has been reconstructed as most probably having apothecia with independent origins of perithecioid ascomata in Chaetothyriomycetidae and Eurotiomycetidae (Eurotiomycetes) and cleistothecioid ascomata in Eurotiales and Onygenales (Schoch et al. 2009). Regarding mazaediate ascomata, ancestral state reconstruction analyses showed a high degree of parallel evolution with multiple independent gains of the mazaedium in the Ascomycota (Prieto et al. 2012). Concerning asci, the ancestor of the Eurotiomycetidae and Chaeothyriomycetidae is reconstructed as producing fissitunicate asci; however, the ancestral state of the most basal node of the Eurotiomycetes is not resolved (Schoch et al. 2009). This suggests the origin of eurotialean prototunicate, deliquescent asci from a fissitunicate ancestor (Geiser et al. 2006). However, new discoveries of novel lineages or the inclusion of new taxa in phylogenies is likely to change our understanding of the evolutionary history of this labile group of fungi concerning ascoma morphology.
The study of a new mazaediate calicioid species suggested a phylogenetic placement within the Eurotiomycetes. Thus, the main aims of this work were to describe this new taxon, to explore its phylogenetic relationships and to analyse the evolution of the ascoma type in the Eurotiomycetes.
Material and methods
Taxon sampling
Preliminar Blast searches (https://blast.ncbi.nlm.nih.gov/Blast.cgi) suggested a placement of the new species within the Eurotiomycetes. Thus, in order to place the new species in the Eurotiomycetes, a larger sample of representatives of all subclasses and orders downloaded from GenBank was assembled (Table 1).
Morphological study
The macro- and microscopic description was made from fresh material and was completed by observing material soaked in water or in KOH 5%. Structures were measured from fresh material or from rehydrated material in H2O. Only mature spores discharged from asci were measured. Spore statistics were calculated for each collection based on measures of 25 spores. Abbreviations of statistics referring to ascospores are Lm = mean length, Wm = mean width and Qm = Lm/Wm. Mounting reagents used were water, Congo red in sodium dodecyl sulphate, Lugol’s solution (IKI) and KOH 5%. Material is deposited in ARAN-Fungi, MAF herbaria (Thiers 2014), as well as in J. Etayo’s private herbarium.
Culture observations
A dikaryotic culture of Cryptocalicium blascoi was obtained by depositing ascospores of a mazaedium on 2% malt extract agar (MEA; 2% malt extract, 2% agar-agar). The plate was sealed with laboratory film and incubated at room temperature. The culture was deposited at the Spanish Type Culture Collection (Spain, CECT). The identity of the culture was confirmed by comparing its nuITS region and sequences obtained from ascomata (Table 1).
Extraction, PCR and sequencing
DNA was extracted using DNeasy Plant Mini Kit (Qiagen) according to the manufacturer’s instructions. The nuITS was amplified employing ITS1F and ITS4 primers (White et al. 1990; Gardes and Bruns 1993). The nuSSU region was amplified using NS1 (White et al. 1990), NS21, nuSSU-1203-3′ (NS23 reverse) and NSU24 (Gargas and Taylor 1992). We amplified nuLSU region with LR0R (Rehner and Samuels 1994) and LR5 (Vilgalys and Hester 1990) primers. The mtSSU region was amplified with mtSSU1 and mtSSU3R (Zoller et al. 1999). We used the primers MCM7-709for and MCM7-1348rev (Schmitt et al. 2009b) for amplification of the MCM7 region. The protein coding RPB1 was amplified using the primers RPB1-Af and RPB1-Cr (Stiller and Hall 1997) and the RPB2 with RPB2-5F and RPB2-7cR (Liu et al. 1999). PCR amplifications were performed using Illustra™ Hot Start Mix RTG PCR beads (GE Healthcare, UK) in a 25 μl volume, containing 3 μl of diluted genomic DNA, 0.5-1.5 μl (10 μM) of each primer and distilled water. Amplifications were performed using the following programme: initial denaturation at 95 °C for 15 min, followed by 35–40 cycles of 95 °C for 45 s, 54–56 °C for 50 s, 72 °C for 1 min, followed by a final extension at 72 °C for 5 min. PCR products were subsequently purified using the enzymatic method Exo-sap-IT (USB Corporation, Santa Clara, CA, USA). The purified PCR products were sequenced at Macrogen Europe service (www.macrogen.com), using the same amplification primers. Sequences were assembled and edited using Sequencher v. 4.10.1. (Genes Codes Corporation, Ann Arbor) and deposited in GenBank (Table 1).
Alignments and phylogenetic analyses
Sequences were aligned manually using AliView v.1.26 (Larsson 2014) and translated to amino acids in protein coding loci. Ambiguous regions (sensu Lutzoni et al. 2000) and introns were delimited manually and excluded from phylogenetic analyses. We also used MAFFT v. 7 (Katoh and Standley 2013) to align automatically and Gblocks 0.91b (Castresana 2000) to identify ambiguous regions. Since the maximum likelihood results were very similar between MAFFT-Gblocks and manually constructed matrices, the last ones were used for analyses. The combined alignment is available at TreeBASE (S28198). Individual gene regions were analysed using maximum likelihood-based inference (ML) in RAxML ver. 8.2.12 (Stamatakis 2014) with a GTRGAMMA model for tree inference and rapid bootstrapping with a GTRCAT model. Gene-tree incongruence was checked by comparing maximum likelihood bootstrap values (ML-BS) among individual gene trees. Clades were considered in conflict when a supported clade (bootstrap support >70%) for one marker was contradicted with significant support by another. Because no supported nodes were in conflict, the data were concatenated. Best fitting substitution models and partitioning scheme for the concatenated 7-locus alignment were inferred by using a greedy algorithm using the AICc in PartitionFinder v. 2.1.1 (Guindon et al. 2010; Lanfear et al. 2017). Based on previous phylogenies (e.g. Prieto et al. 2019), a species of Lichinomycetes (Peltula umbilicata) was used as outgroup. The maximum likelihood analysis was conducted in RAxML ver. 8.2.12 (Stamatakis 2014) using the partitioning scheme suggested by PartitionFinder v.2.1.1 and a GTRGAMMA model. Rapid bootstrapping was run with the GTRCAT model. We also carried out a Bayesian analysis using MrBayes v.3.2.7a (Ronquist et al. 2012). The analyses consisted of four parallel runs of Metropolis-coupled Markov chain Monte Carlo for 50 M generations, starting from a random tree, and sampling one tree every 1000 generations from the posterior distribution. A burn-in sample of 100,000 trees was discarded. To estimate branch lengths and posterior probabilities (PPs), a 50% majority rule consensus tree was computed with the remaining 100,004 trees using the SUMT command of MrBayes. Chains were considered to have converged when average standard deviation of split frequencies across runs dropped below 0.01. Maximum likelihood and Bayesian analyses were run on the CIPRES Science Gateway v. 3.3 (Miller et al. 2010). The resulting trees were edited in Figtree ver 1.3.1. (Rambaut 2010).
Evolution/ancestral state reconstruction for ascoma morphology
Although a high diversity of ascoma types is found in the Eurotiomycetes (Alexopoulous et al. 1996; Jaklitsch et al. 2016), states were coded as open (apothecioid), operculate (perithecioid) or closed (cleistothecioid) ascomata. A fourth character state was coded as absent when asci are not produced in a sporocarp or sexual morphs are unknown.
We inferred ancestral states and traced the evolution of ascoma morphology, using different methodologies and the last 5000 trees that resulted from each run from the Bayesian analysis of the concatenated data set (20000 trees in total). Maximum likelihood and parsimony ancestral state reconstructions were performed in Mesquite 2.75 (Maddison and Maddison 2019) with the ML model Mk1 and equal probability for any particular character change. To account for topological uncertainty, we used the “trace character over trees” option that summarizes the ASR over a series of trees. We reconstructed the ancestral states using the Bayesian approach described by Pagel et al. (2004) and Pagel and Meade (2006), implemented in BayesTraits v. 3.02 (www.evolution.rdg.ac.uk). For this purpose, we used the same posterior tree sample as for the maximum likelihood and parsimony ancestral state reconstructions, with an exponential prior with the mean drawn from a uniform hyperprior on the 0–10 interval. The MCMC was ran for 100M generations, sampling every 1000 generations. The first 10M generations were discarded as burn-in.
Results
Based on the AICc, Partition Finder selected 9 partitions: nuLSU, nuSSU, mtSSU, 1st and 2nd positions of RPB1, 1st and 2nd position of MCM7 and RPB2, 3rd position of RPB1, 3rd position of RPB2, all with a GTR+I+G model, 5.8S nuITS with a SYM+I+G model and the 3rd position of MCM7 with an HKY+G model. The best maximum likelihood tree with bootstrap support and posterior probabilities from the two analyses (maximum likelihood and Bayesian) is provided in Fig. 1, together with the results from the Bayesian ancestral state reconstruction analysis. Main supported clades obtained agree with previous studies (Gueidan et al. 2014; Chen et al. 2015; Réblová et al. 2017). Contrary to the results by Wood et al. (2016), the position of Coryneliomycetidae is statistically supported. The Eurotiomycetes is highly supported as containing the Mycocaliciomycetidae, Sclerococcomycetidae and Chaetothyriomycetidae. The new species forms a supported clade sister to the Eurotiomycetidae, forming a supported clade together with Coryneliomycetidae. The ancestral state reconstruction analyses suggest that the ancestor of Eurotiomycetes has open ascomata (100% for ML and parsimony; open: 0.991, operculate: 0.006 and closed: 0.02 in Bayesian), the same as the ancestor of the basal node Chaetothyriomycetidae-Sclerococcomycetidae-Eurotiomycetidae-Coryneliomycetidae-Cryptocalicium (100% for ML and parsimony; open: 0.898, operculate: 0.083 and closed: 0.018 in Bayesian), while the ancestor of the Chaetothyriomycetidae is recovered as having operculate ascomata (100% for ML and parsimony; open: 0.002, operculate: 0.996 and closed: 0.0002 in Bayesian), and the one of Eurotiomycetidae as producing closed ascomata (100% for ML and parsimony; open: 0.0005, operculate: 0.00004 and closed: 0.999 in Bayesian). The state of the ancestor of Eurotiomycetidae-Coryneliomycetidae and Cryptocalicium is not resolved in parsimony and ML (2.31% open ascomata for parsimony, 30.50% in ML) but is resolved as having open ascomata in the Bayesian: 0.845 (operculate: 0.07, and closed: 0.07). The common ancestor of Chaetothyriomycetidae-Eurotiomycetidae-Coryneliomycetidae and Cryptocalicium is reconstructed as having open ascomata in the Bayesian: 0.763 (operculate: 0.2 and closed: 0.03 in the Bayesian), with no states in the parsimony, and 60.59% open ascomata in the ML. The clade including Eurotiomycetidae and Cryptocalicium is also reconstructed as producing open ascomata (open ascomata: 0.795, operculate: 0.008 and closed: 0.195 in Bayesian, but 11% open ascomata for parsimony, 57.13% open ascomata in ML).
Taxonomy
Cryptocaliciomycetidae M. Prieto, Etayo and Olariaga, subclass nov.
Mycobank: MB 837506.
Ascomata apothecioid, stalked, producing a mazaedium. Hymenium with septate, sterile protruding elements. Asci clavate and with a long pedicel, bitunicate with evanescent walls. Ascospores globose to subglobose, simple, pale brown, thick-walled, passively released.
Cryptocaliciales M. Prieto, Etayo and Olariaga, ord. nov.
Mycobank: MB 837505.
Ascomata apothecioid, stalked, producing a mazaedium. Hymenium with septate, sterile protruding elements. Asci clavate and with a long pedicel, bitunicate with evanescent walls, amyloid after a KOH + IKI treatment. Ascospores globose to subglobose, simple, pale brown, thick-walled, passively released.
Cryptocaliciaceae Etayo, Olariaga and M. Prieto, fam. nov.
Mycobank: MB 837504.
Family of saprotrophic inoperculate ascomycetes. Ascomata apothecioid, stalked, producing a mazaedium. Hymenium with septate, sterile protruding elements. Asci clavate and with a long pedicel, bitunicate with evanescent walls, amyloid after a KOH + IKI treatment. Ascospores globose to subglobose, simple, pale brown, thick-walled, passively released.
Type: Cryptocalicium Etayo, Olariaga and M. Prieto
Cryptocalicium Etayo, Olariaga and M. Prieto, gen. nov.
Mycobank: MB 837503.
Etymology: referring to the calicioid ascomata that occur hidden under the bark.
Ascomata apothecioid, stalked, producing a mazaedium. Hymenium with septate, sterile protruding elements. Asci clavate and with a long pedicel, bitunicate with evanescent walls, amyloid after a KOH + IKI treatment. Ascospores globose to subglobose, simple, pale brown, thick-walled, passively released. Stalk corticate. Outermost layer of the stipe composed of 1–2 rows of cylindrical hyphae, aseptate, dark reddish brown, tightly adhered. Stalk medulla composed of cylindrical hyphae, hyaline. Pigment granules on the external surface of ascomata, dark violet in water, partly dissolving and turning turquoise green in KOH.
Type: Cryptocalicium blascoi Etayo, Olariaga and M. Prieto
Cryptocalicium blascoi Etayo, Olariaga and M. Prieto, sp. nov.
MycoBank: 837519.
Holotypus: Spain, Madrid, Hoyo de Manzanares, Parque de la Cabilda, 40.626832 -3.897757, on the inner side of loose bark strips of Juniperus oxycedrus, 15 May 2020, leg. I. Olariaga, ARAN-Fungi 14723. Ex-type culture: CECT 21190.
Etymology: named after Javier Blasco Zumeta, outstanding Aragonese naturalist, who showed to us the first locality where this species was found and who provided us with further material of it.
Ascomata saprobic on the inner side of loose bark strips (Fig. 1A–B) still attached to the tree, solitary or gregarious, 0.15–0.36 mm high (mazaedium excluded) (Fig. 2 C–H), Fig. 3A). Capitulum urniform to hemispherical, 0.05–0.10 × 0.10–0.15 mm, dark violaceous brown when wet, black and shiny when dehydrated, monocephalic, with an ochre disc. Mazaedium well developed, light ochre (4A6) to greyish green (1D2), spores that keep together. Stalk cylindrical, sometimes with a broader base, straight, seldom bent, smooth, black, shiny, 0.10–0.26 × 0.02–0.04 mm.
Ascospores (Fig. 3B) globose to subglobose, rarely ellipsoid, hyaline inside asci, pale brown when mature, with homogeneous content, with two minute refractive bodies in Congo Red (Fig. 3C), smooth when viewed in a light microscope, (3)3.3–4(4.7) × 2.8–3.5 (4.0) μm (Lm=3.7–3.9, Wm=3.2–3.3, Q=1.08–1.25(1.36), Qm=1.15–1.19; n=25), slightly thick-walled (0.2–0.4 μm). Asci clavate, bitunicate, initially thick-walled (wall 1 μm), then thin-walled, evanescent, 8-spored, 20–27 μm long; pedicel 1 μm diam.; sporiferous part 10–16 × 5–7 μm (Fig. 3D–H). Hamathecium composed of regularly scattered sterile elements, protruding 10–30 μm over mature asci, cylindrical, obtuse, with 2–4 septa, hyaline to very pale brown, smooth or slightly rough, 32–40 × 1.5–2 μm (Fig. 3I). Subhymenium poorly differentiated from the medullary excipulum, composed of a textura angularis-globulosa with more or less isodiametrical hyphae, pale brown in water, green in IKI (Fig. 3J) and amyloid in KOH+IKI (Fig. 3K). Stalk corticate (Fig. 3 L–M). Outermost layer of the stipe composed of 1–2 rows of parallel-arranged hyphae, cylindrical, aseptate, slightly thick-walled, dark reddish brown, tightly adhered, unchanged in KOH, 2.7–3.5 μm broad. Stalk medulla composed of parallel-arranged hyphae, cylindrical, septate, hyaline, thick-walled (0.2–0.4), 1.2–1.6 μm broad. Ectal excipulum poorly differentiated from the medullary excipulum, composed of periclinal-arranged hyphae, of textura prismatica in surface view (Fig. 3N), with cells progressively shorter towards the margin of the capitulum, pale brown, thick-walled (0.5–1 μm), 3.5–5.5 μm broad, covered with crusts of dark reddish brown pigment (Fig. 3O), unchanged in KOH. Medullary excipulum 15–20 μm thick, composed of a textura angularis-globulosa with more or less isodiametrical hyphae, hyaline to very pale brown, thin-walled, 2–4 μm broad, non-gelatinized. Pigment granules present on the ectal excipulum (Fig. 3O–P), surface of the stipe and the subhymenium, dark violet, opaque, partly dissolving and turning turquoise green in KOH (Fig. 3Q).
Colonies on MEA 9–17 mm diam and 4–6 mm high after 90 days at 5 °C, superficial, effuse, convex to obtusely conical, initially even, later wrinkled-cerebriform, cauliflower-like, cream white, tomentose (Fig. 4A). Reverse pale brownish ochre. Margin lobed, distinct (Fig. 4B). Vegetative hyphae sometimes arranged in parallel, cylindrical, septate, sometimes constricted at septa, with sparse intercalary connections, hyaline, smooth, 1.5–2 μm broad (Fig. 4C). Asexual morph hyphomycete-like, observed only in culture. Conidiophores 30–48 μm long, covering the surface of cultures, basally branched, formed by 2–6(8) catenulate segments (Fig. 4D). Segments irregular in shape, usually cylindrical to subglobose, often triangular or angled, constricted at septa and connected to each other by 1–3, thin, 1 μm broad appendices, easily disarticulating in microscopic preparations, 5–9 × 3–6.5 μm (Fig. 4E). Conidiogenous cells cylindrical to ovoid, 5–12 × 1.5–4 μm, bearing one simple apical conidiogenous locus, 1 μm broad, to which immature conidia are attached. Conidia single, first pyriform then subglobose, slightly truncate at the basal end, thin-walled, smooth, hyaline, with small oily droplets, 2.3–3 μm (Lm = 2.6) (Fig. 4F).
Additional specimens examined: SPAIN. Ávila: El Barraco, south shore of Embalse del Burguillo, Peña del Roble, 40.409325 -4.567302, on bark strips of Juniperus oxycedrus, 3 October 2020, M. Prieto & I. Olariaga, ARAN-Fungi 14748. Burgos: Briongos de Cervera, espacio natural La Yecla y Sabinares de Arlanza, stand with large J. thurifera trees, 300 m ahead the town, 41.913889 -3.497222, 1095 m, on bark strips of Juniperus thurifera, 04 August 2019, J. Etayo 31925 (MAF). Santo Domingo de Silos, track from Carazo, espacio natural La Yecla y Sabinares de Arlanza, km 48, 1130 m, on bark strips of J. thurifera, 41.958333 -3.400000, 04 August 2019, J. Etayo 31836 (hb. Etayo). Madrid: Hoyo de Manzanares, Camino del Cementerio, 40.623941 -3.898383, 20 m from the crossing with M-618 road, on bark strips of Cupressus sempervirens, 4 June 2020, I. Olariaga, ARAN-Fungi 14725. Moralzarzal, La Navata, near the Arroyo de Peregrinos stream, 40.617972 -3.951778, on loose bark strips of Juniperus oxycedrus, 7 June 2020, M. Prieto and I. Olariaga, ARAN-Fungi 14724. Pedrezuela, El Tiradero, 40.740483 -3.637523, on bark of a large J. oxycedrus tree, 27 March 2021, M. Prieto & I. Olariaga, ARAN-Fungi 15628. Soto del Real, close to Arroyo del Recuenco, 40.754794 -3.834830, on the underside of bark strips of Juniperus oxycedrus, on dried resin drops, 13 June 2020, M. Prieto and I. Olariaga, ARAN-Fungi 14726. Soria: Borobia, El Frontón, 41.646448 -1.913891, on bark strips of Juniperus thurifera, 17 October 2020, I. Olariaga, ARAN-Fungi 15627. Toledo: Almorox, near arroyo de Labros, 40.300343 -4.243062, on bark strips of Juniperus oxycedrus, 10 October 2020, M. Prieto and I. Olariaga, ARAN-Fungi 14747. Zaragoza: Pina de Ebro, Retuerta de Pina, on underside of bark strips of Juniperus thurifera, 9 October 2017, J. Blasco, Etayo 30875, 31798 (hb. Etayo).
Comments
Cryptocalicium blascoi is probably the tiniest known calicioid fungus. The unusual ecology on the underside of bark strips of Cupressaceae, the presence of a mazaedium, the clavate hemiamyloid asci, hamathecial filaments and the dark violet pigment granules that turn blue-green in KOH make C. blascoi unique. Our attempts to morphologically identify C. blascoi with the existing literature on calicioid fungi (e.g. Tibell 1999) failed, and molecular data confirmed that C. blascoi does not group in any lineage of known calicioid fungi. The clavate asci, with a pedicel, bitunicate and evanescent, are consistent with the phylogenetic position of C. blascoi between the Eurotiomycetidae and the Coryneliomycetidae, both having these characteristics as well. The hemiamyloid reaction of asci and the presence of hamathecial filaments, however, have not been cited for any species in those groups.
So far, C. blascoi has been found in areas with large ancient Juniperus oxycedrus and J. thurifera trees in continental Mediterranean areas. In central Spain (Ávila, Madrid, Soria, Toledo), C. blascoi has been detected in almost every large J. oxycedrus tree sampled in search for it. Although C. blascoi can be very hardly observed in nature even using a hand lens of 10–20 ×, it can be collected by gathering loose bark strips and by scrutinizing those under the dissecting scope. Cryptocalicium blascoi grows directly on the inner part of the bark and occurs often on blackened zones. We have observed several times that a few ascomata grew on solid resin drops. Our efforts to find C. blascoi in areas with higher precipitation rates or where large ancient Cupressaceae do not exist (Huesca, Navarre) failed so far. Thus, it is possible that C. blascoi is restricted to well-preserved stands of ancient Juniperus and Cupressus. Due to the minute size of C. blascoi and to the fact that one of the collections was made on Cupressus sempervirens, it is likely to have been overlooked and to have a considerably wider distribution.
Discussion
The phylogenetic position of the new species constitutes a further example of the high ecological and morphological diversity of the Eurotiomycetes. Other members of Eurotiomycetes with mazaediate and stipitate open ascomata belong in the Mycocaliciomycetidae (Tibell and Wedin 2000), which mainly differ from C. blascoi in having cylindrical asci without iodine reactions. Within Coryneliomycetidae some species also have mazaediate ascomata, but in these, the spores accumulate in perithecial beaks that arise from a stromatic tissue (pseudothecia) (Garrido-Benavent and Pérez-Ortega 2015; Wood et al. 2016). Within both Eurotiomycetidae and Chaetothyriomycetidae, several genera such as Onygena, Pseudotulostoma, Pyrgillus or Trichocoma also include mazaediate—perithecioid or cleistothecioid—members. Ancestral state reconstruction analyses have shown that several independent gains of the mazaedium have occurred in Ascomycota and that this character is highly homoplastic (Prieto et al. 2012). Regarding ecology, many Eurotiomycetes colonize dead plant tissues and living animals (Jaklitsch et al. 2016; Quan et al. 2020). Eurotiomycetidae includes mostly saprophytic species occurring in various substrates like wood, compost, dung, decaying plant material or foodstuffs (Jaklitsch et al. 2016). Members of Coryneliomycetidae are mostly biotrophic on leaves and stems of Podocarpaceae (Garrido-Benavent and Pérez-Ortega 2015; Wood et al. 2016). Mycocaliciomycetidae includes saprophytic species on bark, wood or lichenicolous (Jaklitsch et al. 2016), whereas Sclerococcomycetidae comprises also corticolous and lignicolous species (Réblová et al. 2017). Thus, the ecology of C. blascoi is not surprising as some species of related lineages share similar trophic modes (i.e. saprophytic).
The sister relationship of Cryptocaliciomycetidae with the rest of Eurotiomycetidae and Coryneliomycetidae opens the possibility of including both Coryneliomycetidae and Cryptocaliciomycetidae within the Eurotiomycetidae or of describing a new subclass (Cryptocaliciomycetidae) following the same criteria as in Wood et al. (2016). These authors introduced Coryneliomycetidae to encompass the Coryneliaceae and argued its unique position in the Eurotiomycetes and its morphology. They underlined the presence of pseudothecial mazaedial ascomata containing initially double-walled asci, with the outer layer deliquescing as opposed to Eurotiomycetidae (usually with cleistothecia/gymnothecia and prototunicate asci). The newly described species C. blascoi differs also from members of Eurotiomycetidae in having apothecia and presence of hamathecium and hemiamyloid asci and furthermore represents a genetically distinct lineage.
Ascoma types including open (apothecioid) or closed (perithecioid, cleistothecioid) forms have traditionally been used as key paradigms for ascomycete classification (Schmitt et al. 2009a). Molecular phylogenies show that ascoma evolution is complex, with multiple phylogenetic origins, and that ascoma type is an inappropriate character to circumscribe classes (Schmitt et al. 2009a; Schmitt 2011). Stchigel and Guarro (2007) underlined the high diversity of ascoma types in the Eurotiales: true cleistothecia (e.g. Chaetosartorya, Dichotomomyces, Eurotium, Hemisartorya, Neosartorya and Sclerocleista); asci borne in hyphal masses or tufts (e.g. Byssochlamys, Dendrosphaera, Sagenoma, Talaromyces and Trichocoma); asci sitting on a stroma (e.g. Eupenicillium, Hamigera, Hemicarpenteles, Neocarpenteles, Penicillliopsis, Thermoascus and Warcupiella); cleistothecia produced in a stroma or surrounded by a mass of Hülle cells (e.g. Cristaspora, Dichlaena, Emericella, Fennellia and Petromyces) or naked asci without an ascoma (e.g. Edyuillia, syn. Eurotium). Moreover, in the case of Chaetothyriomycetidae, both ascolocular and ascohymenial developmental types of ascomata exist in Pyrenulales, Verrucariales and Chaetothyriales (Schmitt 2011). However, it is unknown how these ascoma types have evolved, and regardless of their ontogeny, these types may be considered as closed ascomata (perithecioid and cleistothecioid). Our results show that all these ascoma types have evolved from an open ascoma type and support the use of the ascoma gross morphology to define (together with additional characters) subclasses within Eurotiomycetes. Stchigel and Guarro (2007) also stated that taxonomic schemas based on a few morphological characters have proved to be unstable and suggested that an appropriate approach should reflect a natural classification following the evolutionary relationships between the considered organisms. Our ancestral state reconstruction analyses of the ascoma type and the differences with the rest of members of Eurotiomycetidae support the decision of describing new subclasses for both Coryneliomycetidae (Wood et al. 2016) and Cryptocaliciomycetidae, thus reflecting the natural evolution within Eurotiomycetes.
Concerning ascoma evolution, our results, as those by Schoch et al. (2009), support that the ancestor of Eurotiomycetes produced an open ascoma. It is shown here that this character is more stable in Chaetothyriomycetidae, Sclerococcomycetidae and Mycocaliciomycetidae than in the clade including Eurotiomycetidae, Coryneliomycetidae and Cryptocaliciomycetidae. Molecular data have shown that cleistothecia originated several times within the Sordariomycetes—a group producing predominantly perithecioid ascomata—through the loss of the ostiolar canal (Berbee and Taylor 1992a; Rehner and Samuels 1995; Suh and Blackwell 1999). Within the Eurotiomycetes, Schoch et al. (2009) also suggest that cleistothecia have evolved from perithecia. Our results disagree in this respect as it is here suggested that both perithecioid and cleistothecioid forms have arisen from apothecioid ancestors in the Eurotiomycetes. Within Lecanoromycetes (Schmitt et al. 2009a) and Leotiomycetes (Schoch et al. 2009), perithecia and cleistothecia have evolved independently several times from ancestors producing apothecia. All in all, it seems that the evolution of different types of ascomata shows different patterns in different groups of Ascomycota.
Data Availability
NCBI GenBank. TreeBASE.
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Acknowledgements
We are grateful for the skilful lab assistance from the Molecular Systematics Laboratory at the Swedish Museum of Natural History, in particular to Bodil Cronholm. We also thank Clara Rodríguez Arribas (URJC) for her help with the DNA extraction of the culture obtained. We deeply thank Laura López Ocaña and Aurora Zuzuarregui (Spanish Type Culture Collection, CECT) for kindly handling the submission of the ex-type culture. We are also very grateful to Javier Blasco Zumeta for accompanying one of us to the páramos around Pina de Ebro and for providing lichens, lichenicolous fungi and this new species.
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Open access funding by Swedish Museum of Natural History. The first author acknowledges grant dha 2016-23 4.3 from the Swedish Taxonomy Initiative (Svenska artprojektet) administered by the Swedish Species Information Center (ArtDatabanken).
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MP, IO and JE designed the work; MP, IO and JE analysed the data; and MP, IO and JE contributed in writing the manuscript.
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Prieto, M., Etayo, J. & Olariaga, I. A new lineage of mazaediate fungi in the Eurotiomycetes: Cryptocaliciomycetidae subclass. nov., based on the new species Cryptocalicium blascoi and the revision of the ascoma evolution. Mycol Progress 20, 889–904 (2021). https://doi.org/10.1007/s11557-021-01710-y
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DOI: https://doi.org/10.1007/s11557-021-01710-y