Skip to main content
Log in

Prediction of human intestinal absorption of drug compounds

  • Full Articles
  • Published:
Russian Chemical Bulletin Aims and scope

Abstract

Absorption in the small intestine is one of the key processes determining the drug bioavailability upon oral administration. Using fragmental descriptors and artificial neural networks, a predictive model for the relationship between the structure and human intestinal absorption of organic compounds was built and the structural factors affecting the ease of absorption were analyzed. This model is superior in the prediction accuracy and the applicability domain to other known models and can be used in the optimization of pharmacokinetic parameters during drug design.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. A. Ruiz-Garcia, M. Bermejo, A. Moss, V. G. Casabo, J. Pharm. Sci., 2008, 97, 654.

    Article  CAS  Google Scholar 

  2. J. Keldenich, Chem. Biodivers., 2009, 6, 2000.

    Article  CAS  Google Scholar 

  3. S. Alqahtani, L. A. Mohamed, A. Kaddoumi, Expert Opin. Drug Metab. Toxicol., 2013, 9, 1241.

    Article  CAS  Google Scholar 

  4. E. Sjögren, B. Abrahamsson, P. Augustijns, D. Becker, M. B. Bolger, M. Brewster, J. Brouwers, T. Flanagan, M. Harwood, C. Heinen, R. Holm, H. P. Juretschke, M. Kubbinga, A. Lindahl, V. Lukacova, U. Münster, S. Neuhoff, M. A. Nguyen, A. van Peer, C. Reppas, A. R. Hodjegan, C. Tannergren, W. Weitschies, C. Wilson, P. Zane, H. Lennernäs, P. Langguth, Eur. J. Pharm. Sci., 2014, 57, 99.

    Article  Google Scholar 

  5. E. S. Kostewicz, B. Abrahamsson, M. Brewster, J. Brouwers, J. Butler, S. Carlert, P.A. Dickinson, J. Dressman, R. Holm, S. Klein, J. Mann, M. McAllister, M. Minekus, U. Muenster, A. Müllertz, M. Verwei, M. Vertzoni, W. Weitschies, P. Augustijns, Eur. J. Pharm. Sci., 2014, 57, 342.

    Article  CAS  Google Scholar 

  6. T. Hou, Y. Li, W. Zhang, J. Wang, Comb. Chem. High Throughput Screen., 2009, 12, 497.

    Article  CAS  Google Scholar 

  7. J. Zhu, J. Wang, H. Yu, Y. Li, T. Hou, Comb. Chem. High Throughput Screen., 2011, 14, 362.

    Article  CAS  Google Scholar 

  8. F. T. Silva, G. H. Trossini, Med. Chem., 2014, 10, 441.

    Article  CAS  Google Scholar 

  9. Y. H. Zhao, J. Le, M. H. Abraham, A. Hersey, P. J. Eddershaw, C. N. Luscombe, D. Butina, G. Beck, B. Sherborne, I. Cooper, J. A. Platts, J. Pharm. Sci., 2001, 90, 749.

    Article  CAS  Google Scholar 

  10. K. Palm, P. Stenberg, K. Luthman, P. Artursson, Pharm. Res., 1997, 14, 568.

    Article  CAS  Google Scholar 

  11. T. Hou, J. Wang, Y. Li, J. Chem. Inf. Model., 2007, 47, 2408.

    Article  CAS  Google Scholar 

  12. T. Hou, J. Wang, W. Zhang, X. Xu, J. Chem. Inf. Model., 2007, 47, 208.

    Article  CAS  Google Scholar 

  13. M. Kansy, F. Senner, K. Gubernator, J. Med. Chem., 1998, 41, 1007.

    Article  CAS  Google Scholar 

  14. M. D. Wessel, P. C. Jurs, J. W. Tolan, S. M. Muskal, J. Chem. Inf. Comput. Sci., 1998, 38, 726.

    Article  CAS  Google Scholar 

  15. W. L. Chiou, H. Y. Jeong, S. M. Chung, T. C. Wu, Pharm. Res., 2000, 17, 135.

    Article  CAS  Google Scholar 

  16. M. L. Weaver, B. A. Orwig, L. C. Rodriguez, E. D. Graham, J. A. Chin, M. J. Shapiro, J. F. McLeod, J. B. Mangold, Drug. Metab. Dispos., 2001, 29, 415.

    CAS  Google Scholar 

  17. G. Klopman, L. R. Stefan, R. D. Saiakhov, Eur. J. Pharm. Sci., 2002, 17, 253.

    Article  CAS  Google Scholar 

  18. Y. H. Zhao, M. H. Abraham, J. Le, A. Hersey, C. N. Luscombe, G. Beck, B. Sherborne, I. Cooper, Eur. J. Med. Chem., 2003, 38, 233.

    Article  CAS  Google Scholar 

  19. M. A. Pérez, M. B. Sanz, L. R. Torres, R. G. Avalos, M. P. González, H. G. Díaz, Eur. J. Med. Chem., 2004, 39, 905.

    Article  Google Scholar 

  20. M. V. Varma, K. Sateesh, R. Panchagnula, Mol. Pharm., 2005, 2, 12.

    Article  CAS  Google Scholar 

  21. Pharmacogenomics Knowledgebase (PharmGKB); http://www.pharmgkb.org.

  22. T. Hou, J. Wang, W. Zhang, X. Xu, J. Chem. Inf. Model., 2007, 47, 460.

    Article  CAS  Google Scholar 

  23. E. Deretey, M. Feher, J. M. Schmidt, Quant. Struct.-Act. Relat., 2002, 21, 493.

    Article  CAS  Google Scholar 

  24. S. B. Gunturi, R. Narayanan, QSAR Comb. Sci., 2007, 26, 653.

    Article  CAS  Google Scholar 

  25. Y. H. Zhao, M. H. Abraham, J. Le, A. Hersey, C. N. Luscombe, G. Beck, B. Sherborne, I. Cooper, Pharm. Res., 2002, 19, 1446.

    Article  CAS  Google Scholar 

  26. K. Balon, B. U. Riebesehl, B. W. Müller, Pharm. Res., 1999, 16, 882.

    Article  CAS  Google Scholar 

  27. Instant JChem 6.3.3, 2014, ChemAxon Ltd; http://www.chemaxon.com.

  28. N. V. Artemenko, I. I. Baskin, V. A. Palyulin, N. S. Zefirov, Russ. Chem. Bull. (Int. Ed.), 2003, 52, 20 [Izv. Akad. Nauk, Ser. Khim., 2003, 19].

    Article  CAS  Google Scholar 

  29. I. I. Baskin, N. M. Halberstam, N. V. Artemenko, V. A. Palyulin, N. S. Zefirov, in EuroQSAR 2002 Designing Drugs and Crop Protectants: Processes, Problems, and Solutions, Blackwell, Oxford, 2003, 260.

    Google Scholar 

  30. N. S. Zefirov, V. A. Palyulin, J. Chem. Inf. Comput. Sci., 2002, 42, 1112.

    Article  CAS  Google Scholar 

  31. N. I. Zhokhova, I. I. Baskin, A. N. Zefirov, V. A. Palyulin, N. S. Zefirov, Dokl. Chem. (Engl. Transl.), 2010, 430, 39 [Dokl. Akad. Nauk, 2010, 430, 635].

    CAS  Google Scholar 

  32. M. H. Abraham, Chem. Soc. Rev., 1993, 22, 73.

    Article  CAS  Google Scholar 

  33. N. V. Artemenko, V. A. Palyulin, N. S. Zefirov, Dokl. Chem. (Engl. Transl.), 2002, 383, 114 [Dokl. Akad. Nauk, 2002, 383, 771].

    CAS  Google Scholar 

  34. N. I. Zhokhova, I. I. Baskin, V. A. Palyulin, A. N. Zefirov, N. S. Zefirov, Dokl. Chem. (Engl. Transl.), 2007, 417, 282 [Dokl. Akad. Nauk, 2007, 417, 639].

    CAS  Google Scholar 

  35. N. Petri, C. Tannergren, B. Holst, F. A. Mellon, Y. Bao, G. W. Plumb, J. Bacon, K. A. O´Leary, P. A. Kroon, L. Knutson, P. Forsell, T. Eriksson, H. Lennernas, G. Williamson, Drug Metab. Dispos., 2003, 31, 805.

    Article  CAS  Google Scholar 

  36. A. Yan, Z. Wang, Z. Cai, Int. J. Mol. Sci., 2008, 10, 1961.

    Article  Google Scholar 

  37. T. L. Moda, A. D. Andricopulo, Bioorg. Med. Chem. Lett., 2012, 22, 2889.

    Article  CAS  Google Scholar 

  38. I. I. Baskin, A. O. Ait, N. M. Halberstam, V. A. Palyulin, N. S. Zefirov, SAR QSAR Environ. Res., 2002, 13, 35.

    Article  CAS  Google Scholar 

  39. C. A. Lipinski, F. Lombardo, B. W. Dominy, P. J. Feeney, Adv. Drug Deliv. Rev., 2001, 46, 3.

    Article  CAS  Google Scholar 

  40. E. V. Radchenko, P. V. Karpov, S. B. Sosnin, V. A. Palyulin, N. S. Zefirov, in XXII Rossiiskii natsional’nyi kongress “Chelovek i lekarstvo” [XXII Russian National Congress “Man and Drug”], Moscow, April 6–10, 2015, p. 250 (in Russian).

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to E. V. Radchenko.

Additional information

Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 2, pp. 0576—0580, February, 2016.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Radchenko, E.V., Dyabina, A.S., Palyulin, V.A. et al. Prediction of human intestinal absorption of drug compounds. Russ Chem Bull 65, 576–580 (2016). https://doi.org/10.1007/s11172-016-1340-0

Download citation

  • Received:

  • Revised:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11172-016-1340-0

Key words

Navigation