Skip to main content
Log in

Molecular mapping of QTLs for non-parasitic leaf spot resistance and comparison of half-sib DH populations in spring barley

  • Published:
Euphytica Aims and scope Submit manuscript

Abstract

Quantitative trait loci (QTLs) for resistance against non-parasitic leaf spots (NPLS) were first characterized in a spring barley double haploid population derived from the cross IPZ 24727/Barke (Behn et al., 2004). The aim of the present study was to identify QTLs for NPLS resistance in the half-sibling DH population IPZ 24727/Krona and to compare them with the QTLs of the population IPZ 24727/Barke. An anther culture-derived doubled haploid population of 536 DH lines was developed from the cross IPZ 24727 (resistant)/Krona (susceptible). Field trials were performed over two years in two replications, scoring NPLS and agronomic traits that might interact with NPLS. A molecular linkage map of 1035 cM was constructed based on AFLPs, SSRs and the mlo marker. QTL analyses for NPLS identified three QTLs that accounted for 30% of the phenotypic variation. For comparison of the QTLs from each DH population, a consensus map was generated comprising 277 markers with a length of 1199 cM. In both populations, the QTLs for NPLS mapped to chromosomes 1H, 4H and 7H. A common QTL with a great effect in both populations and over all environments was localized at the mlo locus on chromosome 4H, indicating that the mlo powdery mildew resistance locus has a considerable effect on NPLS susceptibility. The steps necessary to validate the QTLs and to improve the NPLS resistance by breeding were discussed.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Anderson, J.A., Y. Ogihara, M.E. Sorrells & S.D. Tanksley, 1992. Development of a chromosomal arm map for wheat based on RFPL markers. Theor Appl Genet 83: 1035–1043.

    CAS  Google Scholar 

  • Asins, M.J., 2002. Present and future of quantitative trait locus analysis in plant breeding. Plant Breed 121: 281–291.

    Article  Google Scholar 

  • Baumer, M., A. Behn, P. Doleschel, K. Fink & J. Wybranietz, 2001. Notreife durch nichtparasitäre Blattverbräunung. Getreidemagazin 2: 92–97.

    Google Scholar 

  • Becker, J. & M. Heun, 1995. Barley microsatellites: Allele variation and mapping. Plant Mol Biol 27: 835–845.

    CAS  PubMed  Google Scholar 

  • Behn, A., L. Hartl, G. Schweizer, G. Wenzel & M. Baumer, 2004. QTL mapping for resistance against non-parasitic leaf spots in a spring barley doubled haploid population. Theor Appl Genet 108: 1229–1235.

    CAS  PubMed  Google Scholar 

  • Breiman, L. & P. Spector, 1992. Submodel selection and evaluation in regression. The X-random case. Int Stat Rev 60: 291–319.

    Google Scholar 

  • Brüschges, R., K. Hollrichter, R. Panstruga, G. Simons, M. Wolter, A. Fritjes, R. van Daelen, T. van der Lee, P. Diergaarde, J. Groenendijk, S. Topsch, P. Vos, F. Salamini & P. Schulze-Lefert, 1997. The barley Mlo gene: A novel control element of plant pathogen resistance. Cell 88: 695–705.

    Article  CAS  PubMed  Google Scholar 

  • Christiansen, J.J., 1934. Nonparasitic leaf spots of barley. Phytopathology 24: 726–742.

    Google Scholar 

  • Haldane, J.B., 1919. The combination of linkage values and the calculation of distance between the loci of linked factors. J Genet 8: 299–309.

    Google Scholar 

  • Kleinhofs, A., 2003. Barley genomics. (http://barleygenomics.wsu.edu).

  • Liu, Z.W., R.M. Biyashev & M.A. Saghai Maroof, 1996. Development of simple sequence repeat DNA markers and their integration into a barley linkage map. Theor Appl Genet 93: 869–876.

    CAS  Google Scholar 

  • Lundqvist, U., J.D. Franckowiak & T. Konishi, 1997. New and revised descriptions of barley genes. Barley Genet Newslett 26: 22–33.

    Google Scholar 

  • Melchinger, A.E., H.F. Utz & C.C. Schön, 1998. Quantitative trait locus (QTL) mapping using different testers and independent population samples in maize reveals low power of QTL detection and large bias in estimates of QTL effects. Genetics 149: 383–403.

    CAS  PubMed  Google Scholar 

  • Obst, A. & G. Huber, 1996. Flecken geben noch Rätsel auf. DLG-Mitteilungen 3: 58–61.

    Google Scholar 

  • Obst, A., M. Baumer & G. Huber, 1995. Nichtparasitär bedingte Blattverbräunungen bei Gerste – ein neues Problem von gelegentlich gross er wirtschaftlicher Bedeutung. Gesunde Pflanzen 8: 308–314.

    Google Scholar 

  • Oxley, S.J., N.D. Havis, K.G. Sutherland & M. Nattall, 2002. Development of a rationale to identify the causal agent of necrotic lesions in spring barley and to identify control mechanisms. Project No. 282, Home-Grown Cereals Authority (HGCA), Scotland.

    Google Scholar 

  • Peterhänsel, C., A. Freialdenhoven, J. Kurth, R. Kolsch & P. Schulze-Lefert, 1997. Interaction analyses of genes required for resistance responses to powdery mildew in barley reveal distinct pathways leading to leaf cell death. Plant Cell 9: 1397–1409.

    PubMed  Google Scholar 

  • Pillen, K., A. Binder, B. Kreuzkam, L. Ramsay, R. Waugh, J. Förster & J. León, 2000. Mapping new EMBL-derived barley microsatellites and their use in differentiating German barley cultivars. Theor Appl Genet 101: 652–660.

    CAS  Google Scholar 

  • Ramsay, L., M. Macaulay, S. Ivanissevich, K. MacLean, L. Cardle, J. Fuller, K.J. Edwards, S. Tuvesson, M. Morgante, A. Massari, E. Maestri, N. Marmiroli, T. Sjakste, M. Ganal, W. Powell & R. Waugh, 2000. A simple sequence repeat-based linkage map of barley. Genetics 156: 1997–2005.

    CAS  PubMed  Google Scholar 

  • SAS Institute Inc., 2000. SAS User’s Guide Version 8.0, Cary, NC.

  • Schwarzbach, E., 2004. The Mlo gene of barley. (http://www.crpmb.org/mlo/).

  • Stein, M. & S. Somerville, 2002. MLO, a novel modulator of plant defences and cell death, binds calmodulin. Trends Plant Sci 7: 379–380.

    CAS  PubMed  Google Scholar 

  • Struss, D. & J. Plieske, 1998. The use of microsatellite markers for detection of genetic diversity in barley populations. Theor Appl Genet 97: 308–315.

    CAS  Google Scholar 

  • Thiel, T., W. Michalek, R.K. Varshney & A. Graner, 2003. Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.). Theor Appl Genet 106: 411–422.

    CAS  PubMed  Google Scholar 

  • Tyrka, M., J. Chelkowski & A. Sobkiewicz, 2003. Resistance Genes in Barley (H. vulgare L.) and their identification using molecular markers. In: Microscopic fungi – host resistance genes, genetics and molecular research. Proceedings of XII Conference Workshop, pp. 49–65.

  • Utz, H.F., 2001. PLABSTAT: ein Computerprogramm zur statistischen Analyse von pflanzenzüchterischen Experimenten Version 2P. Institute for Plant Breeding, University of Hohenheim, Stuttgart, Germany.

    Google Scholar 

  • Utz, H.F. & A.E. Melchinger, 2000. PLABQTL: A computer program to map QTL Version 1.1. Institute for Plant Breeding, University of Hohenheim, Stuttgart, Germany.

    Google Scholar 

  • Utz, H.F., A.E. Melchinger & C.C. Schön, 2000. Bias and sampling error of the estimated proportion of genotypic variance explained by quantitative trait loci determined from experimental data in maize using cross validation and validation with independent samples. Genetics 154: 1839–1849.

    PubMed  Google Scholar 

  • Van Ooijen, J.W. & R.E. Voorrips, 2001. Joinmap 3.0 Software for the calculation of genetic linkage maps. Plant Research International, Wageningen, The Netherlands, pp. 1–51.

    Google Scholar 

  • Vos, P., R. Hogers, M. Bleekr, M. Reijans, T. van de Lee, M. Hornes, A. Fritjers, J. Pot, J. Peleman, M. Kuiper & M. Zabeau, 1995. AFLP: A new technique for DNA fingerprinting. Nucleic Acids Res 23(21): 4407–4414.

    CAS  PubMed  Google Scholar 

  • Wu, Y.-X. & A. von Tiedemann, 2002. Evidence for oxidative stress involved in physiological leaf spot formation in winter and spring barley. Phytopathology 97: 145–155.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Lorenz Hartl.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Behn, A., Hartl, L., Schweizer, G. et al. Molecular mapping of QTLs for non-parasitic leaf spot resistance and comparison of half-sib DH populations in spring barley. Euphytica 141, 291–299 (2005). https://doi.org/10.1007/s10681-005-7697-z

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10681-005-7697-z

Keywords

Navigation