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Effects of long-term fertilization on contents and distribution of microbial residues within aggregate structures of a clay soil

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Abstract

The objective of this study was to examine the effects of long-term (18 years) fertilization on contents and distributions of amino sugars within aggregate-size fractions of a clay soil (Udolls, USDA Soil Taxonomy System). Treatments included unfertilized control (CK), mineralization fertilization (NP), and application of mineral fertilizers plus pig manure (NPM). Soil samples were collected from the 0–20-cm layer and fractionated to aggregates of different sizes (>2,000 μm, 250–2,000 μm, 53–250 μm, and <53 μm) by wet sieving. Glucosamine (GluN) and muramic acid (MurA) were used as biomarkers for fungal and bacterial residues, respectively. Results showed that NPM significantly increased the concentrations of total amino sugars in all aggregate-size fractions compared with the CK treatment. This occurred concurrently with an increase in mean weight diameter of water-stable aggregates and soil organic C content. Higher concentrations of total amino sugars in macroaggregates (>250 μm) of NPM soils were mainly due to a relatively greater accumulation of GluN over MurA, which suggests that accumulation of fungal residues is important for soil aggregation and organic C storage in the tested soil. By contrast, mineral fertilization was ineffective on soil aggregation and amino sugar accumulation. Furthermore, GluN was relatively enriched in fractions of >250 μm while MurA was generally enriched in the 53–250-μm fraction. This indicates that there are specific mechanisms of fungal and bacterial enrichment in different aggregate-size fractions.

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References

  • Amelung W (2001) Methods using amino sugars as markers for microbial residues in soil. In: Lal R, Kimble JM, Follett RF, Stewart BA (eds) Assessment methods for soil carbon. Lewis, Boca Raton, pp 233–272

    Google Scholar 

  • Amelung W, Miltner A, Zhang X, Zech W (2001) Fate of microbial residues during litter decomposition as affected by minerals. Soil Sci 166:598–606

    Article  CAS  Google Scholar 

  • Amelung W, Brodowski S, Sandhage-Hofmann A, Bol R (2008) Combining biomarker with stable isotope analyses for assessing the transformation and turnover of soil organic matter. Adv Agron 100:155–250

    Article  CAS  Google Scholar 

  • Angers DA, Giroux M (1996) Recently deposited organic matter in soil water - stable aggregates. Soil Sci Soc Am J 60:1547–1551

    Article  CAS  Google Scholar 

  • Beare MH, Hu S, Coleman DC, Hendrix PF (1997) Influences of mycelial fungi on soil aggregation and organic matter storage in conventional and no-tillage soils. Appl Soil Ecol 5:211–219

    Article  Google Scholar 

  • Chantigny MH, Angers DA, Prévost D, Vézina LP, Chalifour FP (1997) Soil aggregation and fungal and bacterial biomass under annual and perennial cropping systems. Soil Sci Soc Am J 61:262–267

    Article  CAS  Google Scholar 

  • Dechesne A, Pallud C, Debouzie D, Flandrois JP, Vogel TM, Gaudet JP, Grundman GL (2004) A novel method for characterizing the microscale 3D spatial distribution of bacteria in soil. Soil Biol Biochem 35:1537–1546

    Article  Google Scholar 

  • Ding X, Han XZ, Liang Y, Qiao YF, Li LJ, Li N (2012) Changes in soil organic carbon pools after 10 years of continuous manuring combined with chemical fertilizer in a Mollisol in China. Soil Till Res 122:36–41

    Article  Google Scholar 

  • Ding X, Han XZ, Zhang X, Qiao YF, Liang Y (2013) Continuous manuring combined with chemical fertilizer affects soil microbial residues in a Mollisol. Biol Fertil Soils 49:387–393

    Article  Google Scholar 

  • Glaser B, Turrión MB, Alef K (2004) Amino sugars and muramic acid biomarkers for soil microbial community structure analysis. Soil Biol Biochem 36:399–407

    Article  CAS  Google Scholar 

  • Grundmann GL, Dechesne A, Bartoli F, Flandrois JP, Chasse JL, Kizungu R (2001) Spatial modeling of nitrifier microhabitats in soil. Soil Sci Soc Am J 65:1709–1716

    Article  CAS  Google Scholar 

  • Guggenberger G, Frey SD, Six J, Paustian K, Elliott ET (1999a) Bacterial and fungal cell-wall residues in conventional and no-tillage agroecosystems. Soil Sci Soc Am J 63:1188–1198

    Article  CAS  Google Scholar 

  • Guggenberger G, Elliott ET, Frey SD, Six J, Paustian K (1999b) Microbial contributions to the aggregation of a cultivated grassland soil amended with starch. Soil Biol Biochem 31:407–419

    Article  CAS  Google Scholar 

  • Huang M, Jiang L, Zou Y, Xu S, Deng G (2013) Changes in soil microbial properties with no-tillage in Chinese cropping systems. Biol Fertil Soils 49:373–377

    Article  Google Scholar 

  • Jiang X, Wright AL, Wang X, Liang F (2011) Tillage-induced changes in fungal and bacterial biomass associated with soil aggregates: a long-term field study in a subtropical rice soil in China. Appl Soil Ecol 48:168–173

    Article  Google Scholar 

  • Joergensen RG, Mäder P, Flieβbach A (2010) Long-term effects of organic farming on fungal and bacterial residues in relation to microbial energy metabolism. Biol Fertil Soils 46:303–307

    Article  CAS  Google Scholar 

  • Kemper WD, Rosenau RC (1986) Aggregate stability and size distribution. In: Klute A (ed) Methods of soil analysis. ASA and SSSA, Madison, pp 425–442

    Google Scholar 

  • Lavelle P, Bignell DE, Austen MC et al (2004) Connecting soil and sediment biodiversity: the role of scale and implications for management. In: Wall DH (ed) Sustaining Biodiversity and Ecosystem Services in Soils and Sediments. Island Press, New York, pp 193–224

    Google Scholar 

  • Li HB, Han XZ, Wang F, Qiao YF, Xing BS (2007) Impact of soil management on organic carbon content and aggregate stability. Commun Soil Sci Plant Anal 38:1673–1690

    Article  CAS  Google Scholar 

  • Liang C, Zhang X, Balser TC (2007) Net microbial amino sugar accumulation process in soil as influenced by different plant material inputs. Biol Fertil Soils 44:1–7

    Article  CAS  Google Scholar 

  • Liang C, Cheng G, Wixon DL, Balser TC (2011) An absorbing Markov chain approach to understanding the microbial role in soil carbon stabilization. Biogeochemistry 106:303–309

    Article  Google Scholar 

  • Liu XB, Zhang XY, Wang YX, Sui YY, Zhang SL, Herbert SJ, Ding G (2010) Soil degradation: a problem threatening the sustainable development of agriculture in Northeast China. Plant Soil Environ 2:87–97

    Google Scholar 

  • Mondini C, Cayuela ML, Sanchez-Monedero MA, Roig A, Brookes PC (2006) Soil microbial biomass activation by trace amounts of readily available substrate. Biol Fertil Soils 42:542–549

    Article  Google Scholar 

  • Mummey D, Holben W, Six J, Stahl P (2006) Spatial stratification of soil bacterial populations in aggregates of diverse soils. Microb Ecol 51:404–411

    Article  PubMed  Google Scholar 

  • Pallud C, Dechesne A, Gaudet JP, Debouzie D, Grundmann GL (2004) Modification of 2,4-dichlorophenoxyacetic acid degrader microhabitats during growth in soil columns. Appl Environ Microbiol 70:2709–2716

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Parsons JW (1981) Chemistry and distribution of amino sugars in soils and soil organisms. In: Paul EA, Ladd JN (eds) Soil biochemistry, vol 5. Marcel Dekker, New York, pp 197–227

    Google Scholar 

  • Six J, Elliott ET, Paustian K, Doran JW (1998) Aggregation and soil organic matter accumulation in cultivated and native grass-land soils. Soil Sci Soc Am J 62:1367–1377

    Article  CAS  Google Scholar 

  • Six J, Elliott ET, Paustian K (2000) Soil macroaggregate turnover and microaggregate formation: a mechanism for C sequestration under no-tillage agriculture. Soil Biol Biochem 32:2099–2103

    Article  CAS  Google Scholar 

  • Six J, Frey SD, Thiet RK, Batten KM (2006) Bacterial and fungal contributions to carbon sequestration in agroecosystems. Soil Sci Soc Am J 70:555–569

    Article  CAS  Google Scholar 

  • Soil Survey Staff (1998) Keys to soil taxonomy. United States Department of Agriculture, Natural Resources Conservation Service, Washington, p 328

    Google Scholar 

  • Solomon D, Lehmann J, Zech W (2001) Land use effects on amino sugar signature of chromic Luvisol in the semi-arid part of northern Tanzania. Biol Fertil Soils 33:33–40

    Article  CAS  Google Scholar 

  • Sposito G, Skipper NT, Sutton R, Park SH, Soper AK, Greathouse JA (1999) Surface geochemistry of the clay minerals. PNAS 96:3358–3364

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Stevenson FJ (1982) Organic forms of soil nitrogen. In: Stevenson FJ (ed) Nitrogen in agricultural soils. American Society of Agronomy, Madison, pp 101–104

    Google Scholar 

  • Tisdall JM, Oades JM (1982) Organic matter and water stable aggregates in soils. J Soil Sci 33:141–163

    Article  CAS  Google Scholar 

  • van Veen JA, Ladd JN, Amato M (1985) Turnover of carbon and nitrogen through the microbial biomass in a sandy loam and a clay soil incubated with [14C(U)] glucose and [15N](NH4)2SO4 under different moisture regimes. Soil Biol Biochem 17:257–274

    Article  Google Scholar 

  • Vance ED, Brooks PC, Jenkinson DS (1987) An extraction method for measuring soil microbial biomass C. Soil Biol Biochem 19:703–707

    Article  CAS  Google Scholar 

  • Wall DH, Bardgett R, Behan-Pelletier V, Herrick JE, Jones H, Ritz K, Six J, Stone D, Van Der Putten WH (2012) Soil ecology and ecosystem services. Oxford University Press, UK

    Book  Google Scholar 

  • Wei X, Li X, Jia X, Shao M (2013) Accumulation of soil organic carbon in aggregates after afforestation on abandoned farmland. Biol Fertil Soils 49:637–646

    Article  CAS  Google Scholar 

  • World Reference Base for Soil Resources (2006) A framework for international classification, correlation and communication. World Soil Resources Reports 103

  • Wu J, Joergensen RG, Pommerening B, Chaussod R, Brookes PC (1990) Measurement of microbial biomass C by fumigation-extraction – an automated procedure. Soil Biol Biochem 22:1167–1169

    Article  CAS  Google Scholar 

  • Zhang X, Amelung W (1996) Gas chromatographic determination of muramic acid, glucosamine, mannosamine, and galactosamine in soils. Soil Biol Biochem 28:1201–1206

    Article  CAS  Google Scholar 

  • Zhang X, Amelung W, Yuan Y, Zech W, Samson-Liebig S, Brown L, Zech W (1999) Land-use effects on amino sugars in particle-size fractions of an Argiudoll. Appl Soil Ecol 11:271–275

    Article  Google Scholar 

  • Zhang B, Liang C, He H, Zhang X (2013) Variations in soil microbial communities and residues along an altitude gradient on the northern slope of Changbai Mountain, China. PLoS ONE 8(6):e66184. doi:10.1371/journal.pone.0066184

    Article  CAS  PubMed Central  PubMed  Google Scholar 

Download references

Acknowledgments

We appreciate Professor Paolo Nannipieri and the three anonymous reviewers for their insightful and constructive comments on this paper. This work was financially supported by the fund of Excellent Young Talent, Northeast of Geography and Agroecology, Chinese Academy of Sciences (DLSYQ120002), Science Foundation of the Chinese Academy of Sciences (KZZD-EW-TZ-16-02), and the National Natural Science Foundation of China (41371295, 41101282).

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Ding, X., Han, X. Effects of long-term fertilization on contents and distribution of microbial residues within aggregate structures of a clay soil. Biol Fertil Soils 50, 549–554 (2014). https://doi.org/10.1007/s00374-013-0867-6

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  • DOI: https://doi.org/10.1007/s00374-013-0867-6

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