Skip to main content
Log in

Pyramiding and dissecting disease resistance QTL to barley stripe rust

  • Original Paper
  • Published:
Theoretical and Applied Genetics Aims and scope Submit manuscript

Abstract

Quantitative resistance (QR) to disease is usually more durable than qualitative resistance, but its genetic basis is not well understood. We used the barley/barley stripe rust pathosystem as a model for the characterization of the QR phenotype and associated genomic regions. As an intermediate step in the preparation of near-isogenic lines representing individual QTL alleles and combinations of QTL alleles in a homogeneous genetic background, we developed a set of QTL introgression lines in a susceptible background. These intermediate barley near-isogenic (i-BISON) lines represent disease resistance QTL combined in one-, two-, and three-way combinations in a susceptible background. We measured four components of disease resistance on the i-BISON lines: latent period, infection efficiency, lesion size, and pustule density. The greatest differences between the target QTL introgressions and the susceptible controls were for the latter three traits. On average, however, the QTL introgressions also had longer latent periods than the susceptible parent (Baronesse). There were significant differences in the magnitudes of effects of different QTL alleles. The 4H QTL allele had the largest effect, followed by the alleles on 1H and 5H. Pyramiding multiple QTL alleles led to higher levels of resistance in terms of all components of QR except latent period.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5

Similar content being viewed by others

References

  • van Berloo R, Aalbers H, Werkman A, Niks RE (2001) Resistance QTL confirmed though development of QTL-NILs for barley leaf rust resistance. Mol Breed 8:187–195

    Article  Google Scholar 

  • Broers LHM (1997) Components of quantitative resistance to yellow rust in ten spring bread wheat cultivars and their relations with field assessments. Euphytica 96:215–223

    Article  Google Scholar 

  • Brueggeman R, Rostoks N, Kudrna D, Kilian A, Han F, Chen J, Druka A, Steffenson B (2002) The barley stem rust-resistance gene Rpg1 is a novel disease-resistance gene with homology to receptor kinases. Proc Natl Acad Sci USA 99:9328–9333

    Article  PubMed  CAS  Google Scholar 

  • Castro AJ, Chen XM, Hayes PM, Knapp SJ, Line RF, Toojinda T, Vivar H (2002) Coincident QTL which determine seedling and adult plant resistance to stripe rust in barley. Crop Sci 42:1701–1708

    Article  CAS  Google Scholar 

  • Castro AJ, Capettini F, Corey AE, Filichkin T, Hayes PM, Kleinhofs A, Kudrna D, Richardson K, Sandoval-Islas S, Rossi C, Vivar H (2003a) Mapping and pyramiding of qualitative and quantitative resistance to stripe rust in barley. Theor Appl Genet 107:922–930

    Article  CAS  Google Scholar 

  • Castro AJ, Chen XM, Hayes PM, Johnston M (2003b) Pyramiding quantitative trait locus (QTL) alleles determining resistance to barley stripe rust: effects on resistance at the seedling stage. Crop Sci 43:651–659

    Article  CAS  Google Scholar 

  • Castro AJ, Chen X, Corey A, Filichkina T, Hayes PM, Mundt C, Richardson K, Sandoval-Islas S, Vivar H (2003c) Pyramiding and validation of quantitative trait locus (QTL) alleles determining resistance to barley stripe rust: effects on adult plant resistance. Crop Sci 43:2234–2239

    Article  Google Scholar 

  • Gebhardt C, Valkonen JP (2001) Organization of genes controlling disease resistance in the potato genome. Annu Rev Phytopathol 39:79–102

    Article  PubMed  CAS  Google Scholar 

  • Johnson R (1981) Durable resistance: definition of, genetic control, and attainment in plant breeding. Phytopathology 71:567–568

    Article  Google Scholar 

  • Lefebvre V, Chèvre A-M (1995) Tools for marking plant disease and resistance genes: a review. Agronomie 15:3–19

    Article  Google Scholar 

  • Leonard KJ, Mundt CC (1984) Methods for estimating epidemiological effects of quantitative resistance to plant diseases. Theor Appl Genet 67:219–230

    Article  Google Scholar 

  • Li Z-K, Luo LJ, Mei HW, Paterson AH, Zhao XH, Zhong DB, Wang YP, Yu XQ, Zhu L, Tabien R, Stansel JW, Ying CS (1999) A “defeated” rice resistance gene acts as a QTL against a virulent strain of Xanthomonas oryzae pv. oryzae. Mol Gen Genet 261:58–63

    Article  PubMed  CAS  Google Scholar 

  • Liu Z-W, Biyashev RM, Maroof MAS (1996) Development of simple sequence repeat DNA markers and their integration into a barley linkage map. Theor Appl Genet 93:869–876

    Article  CAS  Google Scholar 

  • Niks RE, Rubiales D (2002) Potentially durable resistance mechanisms in plants to specialized fungal pathogens. Euphytica 124:201–216

    Article  CAS  Google Scholar 

  • Osman-Ghani N, Manners JG (1985) Components of partial resistance to Puccinia striiformis in barley. Plant Pathol 34:75–82

    Article  Google Scholar 

  • Parlevliet JE (1975) Partial resistance of barley to leaf rust, Puccinia hordei. I. Effect of cultivar and development stage on latent period. Euphytica 24:21–27

    Article  Google Scholar 

  • Parlevliet JE (1979) Components of resistance that reduce the rate of epidemic development. Annu Rev Phytopathol 17:203–222

    Article  Google Scholar 

  • Pflieger S, Lefebvre V, Causse M (2001) The candidate gene approach in plant genetics: a review. Mol Breed 7:275–291

    Article  CAS  Google Scholar 

  • Qi X, Niks RE, Stam P, Lindhout P (1998) Identification of QTLs for partial resistance to lead rust (Puccinia hordei) in barley. Theor Appl Genet 96:1205–1215

    Article  CAS  Google Scholar 

  • Ramsay L, Macaulay M, Ivanissevich SD, MacLean K, Cardle L, Fuller J, Edwards KJ, Tuvesson S, Morgante M, Massari A, Maestri E, Marmiroli N, Sjakste T, Ganal M, Powell W, Waugh R (2000) A simple sequence repeat-based linkage map of barley. Genetics 156:1997–2005

    PubMed  CAS  Google Scholar 

  • SAS Institute (2001) The SAS system for Windows v. 8.02. SAS Institute Inc. Cary, USA

  • Struss D, Plieske J (1998) The use of microsatellite markers for detection of genetic diversity in barley populations. Theor Appl Genet 97:308–315

    Article  CAS  Google Scholar 

  • Toojinda T, Baird E, Broers L, Chen XM, Hayes PM, Kleinhofs A, Korte J, Kudrna D, Leung H, Line RF, Powell W, Vivar H (2000) Mapping quantitative and qualitative disease resistance genes in a doubled haploid population of barley. Theor Appl Genet 101:580–589

    Article  CAS  Google Scholar 

  • Vales MI, Schön CC, Capettini F, Chen XM, Corey AE, Mather DE, Mundt CC, Richardson KL, Sandoval-Islas JS, Utz HF, Hayes PM (2006) Effect of population size on the estimation of QTL: a test using resistance to barley stripe rust. Theor Appl Genet (in press)

  • Wang D, Shi J, Carlson SR, Cregan PB, Ward RW, Diers BW (2003) A low-cost, high-throughput polyacrylamide gel electrophoresis system for genotyping with microsatellite DNA markers. Crop Sci 43:1828–1832

    Article  CAS  Google Scholar 

  • Wisser RJ, Sun Q, Hulbert SH, Kresovich S, Nelson RJ (2005) Identification and characterization of regions of the rice genome associated with broad-spectrum, quantitative disease resistance. Genetics 169:2277–2293

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgements

This work was supported in part by the USDA-NRI program (Plant–Microbe Interactions) and the United States Barley Genome Project (USBGP). We thank Mary Moore, Tanya Filichkin, Ann Corey, and graduate and undergraduate students in the OSU barley program for their technical support in the lab and greenhouse.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to P. M. Hayes.

Additional information

Communicated by F. Ordon

Rights and permissions

Reprints and permissions

About this article

Cite this article

Richardson, K.L., Vales, M.I., Kling, J.G. et al. Pyramiding and dissecting disease resistance QTL to barley stripe rust. Theor Appl Genet 113, 485–495 (2006). https://doi.org/10.1007/s00122-006-0314-2

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00122-006-0314-2

Keywords

Navigation