1887

Abstract

Nineteen strains of , 23 received as or , marker cultures of and 88 representatives of and the taxon were the subject of numerical phenetic analyses using 92 characters. The data were examined using the simple matching ( ) and Jaccard ( ) coefficients and clustering was achieved using the average linkage algorithm. With a single exception, strains containing -diaminopimelic acid, arabinose, galactose and mycolic acids were recovered in five aggregate clusters corresponding to and the taxon. Most of the strains formed a good taxospecies which included the type strain of The numerical data, and the results of earlier chemical and genetical studies, also provide sufficient evidence for the transfer of to as comb.nov. and for the recognition of sp.nov. for some strains previously classified as (Hefferan) Goodfellow & Alderson. The classification of the remaining marker strains correlates well with other major developments in coryneform taxonomy.

Loading

Article metrics loading...

/content/journal/micro/10.1099/00221287-128-4-731
1982-04-01
2024-03-29
Loading full text...

Full text loading...

/deliver/fulltext/micro/128/4/mic-128-4-731.html?itemId=/content/journal/micro/10.1099/00221287-128-4-731&mimeType=html&fmt=ahah

References

  1. Alshamaony L., Goodfellow M., Minnikin D. E., Bowden G. H., Hardie J. M. 1977; Fatty and mycolic acid composition of Bacterionema matruchotii and related organisms. Journal of General Microbiology 98:205–213
    [Google Scholar]
  2. Barksdale L. 1970; Corynebacterium diphtheriae and its relatives. Bacteriological Reviews 34:378–422
    [Google Scholar]
  3. Barton M. D., Hughes K. L. 1980; Corynebacterium equi: a review. Veterinary Bulletin 50:65–80
    [Google Scholar]
  4. Bousfield I. J. 1972; A taxonomic study of some coryneform bacteria. Journal of General Microbiology 71:441–455
    [Google Scholar]
  5. Bousfield I. J., Goodfellow M. 1976; The ‘rhodochrous’ complex and its relationships with allied taxa. In The Biology of the Nocardiae pp. 39–65 Edited by Goodfellow M., Brownell G. H., Serrano J. A. London: Academic Press;
    [Google Scholar]
  6. Bradley S. G., Mordarski M. 1976; Association of polydeoxyribonucleotides of deoxyribonucleic acids from nocardioform bacteria. In The Biology of the Nocardiae pp. 310–336 Edited by Goodfellow M., Brownell G. H., Serrano J. A. London: Academic Press;
    [Google Scholar]
  7. Collins M. D., Goodfellow M., Minnikin D. E. 1979; Isoprenoid quinones in the classification of coryneform and related bacteria. Journal of General Microbiology 110:127–136
    [Google Scholar]
  8. Collins M. D., Goodfellow M., Minnikin D. E. 1980a; Fatty acid, isoprenoid quinone and polar lipid composition in the classification of Curtobacterium and related taxa. Journal of General Microbiology 118:29–37
    [Google Scholar]
  9. Collins M. D., Shah H. N., Minnikin D. E. 1980b; A note on the separation of natural mixtures of bacterial menaquinones using reverse phase thin-layer chromatography. Journal of Applied Bacteriology 48:277–282
    [Google Scholar]
  10. Crombach W. H. J. 1978; Caseobacter polymorphus gen.nov., sp.nov., a coryneform bacterium from cheese. International Journal of Systematic Bacteriology 28:354–366
    [Google Scholar]
  11. Davis G. H. G., Newton K. G. 1969; Numerical taxonomy of some named coryneform bacteria. Journal of General Microbiology 56:195–214
    [Google Scholar]
  12. Eberson F. 1918; A bacteriological study of the diphtheroid organisms with special reference to Hodgkin’s disease. Journal of Infectious Diseases 23:1–42
    [Google Scholar]
  13. Gilmour M. W. 1974; Bacterionema. In Bergey’s Manual of Determinative Bacteriology, 8th edn. pp. 676–679 Edited by Buchanan R. E., Gibbons N. E. Baltimore: Williams & Wilkins;
    [Google Scholar]
  14. Gilmour M. N., Howell A. JR Bibby B. G. 1961; The classification of organisms termed Leptotrichia (Leptothrix) buccalis. 1. Review of the literature and proposed separation into Leptotrichia buccalis Trevisan, 1879 and Bacterionema matruchotii (Mendel, 1919) comb.nov. Bacteriological Reviews 25:131–141
    [Google Scholar]
  15. Goodfellow M. 1971; Numerical taxonomy of some nocardioform bacteria. Journal of General Microbiology 69:33–80
    [Google Scholar]
  16. Goodfellow M., Alderson G. 1977; The actinomycete genus Rhodococcus: a home for the ‘rhodochrous’ complex. Journal of General Microbiology 100:99–122
    [Google Scholar]
  17. Goodfellow M., Minnikin D. E. 1978; Numerical and chemical methods in the classification of Nocardia and related taxa. Zentralblatt für Bakteriologie, Parasitenkunde, Infektions-krankheiten und Hygiene (Abteilung I) Supplement 6:43–51
    [Google Scholar]
  18. Goodfellow M., Minnikin D. E. 1981a; Introduction to the coryneform bacteria. In The Prokaryotes: A Handbook of Habitats, Isolation and Identification of Bacteria pp. 1811–1826 Edited by Starr M. P., Stolp H., Triiper H. G., Balows A., Schlegel H. G. Berlin: Springer Verlag;
    [Google Scholar]
  19. Goodfellow M., Minnikin D. E. 1981b; The genera Nocardia and Rhodococcus. In The Prokaryotes: A Handbook of Habitats, Isolation, and Identification of Bacteria pp. 2016–2027 Edited by Starr M. P., Stolp H., Trüper H. G., Balows A., Schlegel H. G. Berlin: Springer Verlag;
    [Google Scholar]
  20. Goodfellow M., Pirouz T. 1982; Numerical classification of sporoactinomycetes containing meso-diaminopimelic acid in the cell wall. Journal of General Microbiology 128:503–527
    [Google Scholar]
  21. Goodfellow M., Schaal K. P. 1979; Identification methods for Nocardia Actinomadura, and Rhodococcus. In Identification Methods for Microbiologists, 2nd edn. pp. 261–276 Edited by Skinner F. A., Lovelock D. W. London: Academic Press;
    [Google Scholar]
  22. Goodfellow M., Wayne L. G. 1982; Taxonomy and nomenclature. In Biology of the Mycobacteria pp. 472–521 Edited by Ratledge C., Stanford J. L. London: Academic Press;
    [Google Scholar]
  23. Goodfellow M., Lind A., Mordarska H., Pattyn S., Tsukumura M. 1974; A cooperative numerical analysis of cultures considered to belong to the ‘rhodochrous’ taxon. Journal of General Microbiology 85:291–302
    [Google Scholar]
  24. Goodfellow M., Collins M. D., Minnikin D. E. 1976; Thin-layer chromatographic analysis of mycolic acid and other long-chain components in whole-organism methanolysates of coryneform and related taxa. Journal of General Microbiology 96:351–358
    [Google Scholar]
  25. Goodfellow M., Mordarski M., Szyba K., Pulverer G. 1978a; Relationships among rhodococci based upon deoxyribonucleic acid reassociation. In Genetics of the Actinomycetales pp. 231–234 Edited by Freerksen E., Tarnók I., Thumin J. H. Stuttgart: Gustav Fischer Verlag;
    [Google Scholar]
  26. Goodfellow M., Orlean P. A. B., Collins M. D., Alshamaony L., Minnikin D. E. 1978b; Chemical and numerical taxonomy of strains received as Gordona aurantiaca. Journal of General Microbiology 109:57–68
    [Google Scholar]
  27. Goodfellow M., Alderson G., Lacey J. 1979; Numerical taxonomy of Actinomadura and related actinomycetes. Journal of General Microbiology 112:95–111
    [Google Scholar]
  28. Goodfellow M., Collins M. D., Minnikin D. E. 1980; Fatty acid and polar lipid composition in the classification of Kurthia. Journal of Applied Bacteriology 48:269–276
    [Google Scholar]
  29. Goodfellow M., Minnikin D. E., Todd C., Alderson G., Minnikin S. M., Collins M. D. 1982; Numerical and chemical classification of Nocardia amarae. Journal of General Microbiology 128: (in the Press)
    [Google Scholar]
  30. Gordon R. E., Mihm J. M. 1962; Identification of Nocardia caviae (Erikson) nov.comb. Annals of the New York Academy of Sciences 98:628–636
    [Google Scholar]
  31. Harrington B. J. 1966; Numerical taxonomical study of some corynebacteria and related organisms. Journal of General Microbiology 45:31–40
    [Google Scholar]
  32. Holmberg K., Hallander H. O. 1973; Numerical taxonomy and laboratory identification of Bacterionema matruchotii, Rothia dentocariosa,Actinomyces naeslundii, Actinomyces viscosus and some related bacteria. Journal of General Microbiology 76:43–63
    [Google Scholar]
  33. Jensen H. L. 1952; The coryneform bacteria. Annual Review of Microbiology 6:77–90
    [Google Scholar]
  34. Jones D. 1975; A numerical taxonomic study of coryneform and related bacteria. Journal of General Microbiology 87:52–96
    [Google Scholar]
  35. Jones D. 1978; An evaluation of the contributions of numerical taxonomic studies to the classification of coryneform bacteria. In Coryneform Bacteria pp. 13–46 Edited by Bousfield I. J., Callely A. G. London: Academic Press;
    [Google Scholar]
  36. Jones D., Sackin M. J. 1980; Numerical methods in the classification and identification of bacteria with especial reference to the Enterobacteriaceae. In Microbiological Classification and Identification pp. 73–106 Edited by Goodfellow M., Board R. G. London: Academic Press;
    [Google Scholar]
  37. Keddie R. M. 1978; What do we mean by coryneform bacteria?. In Coryneform Bacteria pp. 1–12 Edited by Bousfield I. J., Callely A. G. London: Academic Press;
    [Google Scholar]
  38. Keddie R. M., Bousfield I. J. 1980; Cell wall composition in the classification and identification of coryneform bacteria. In Microbiological Classification and Identification pp. 167–188 Edited by Goodfellow M., Board R. G. London: Academic Press;
    [Google Scholar]
  39. Keddie R. M., Cure G. L. 1977; The cell wall composition and distribution of free mycolic acids in named strains of coryneform bacteria and in isolates from various natural sources. Journal of Applied Bacteriology 42:229–252
    [Google Scholar]
  40. Kroppenstedt R. M., Kutzner H. J. 1978; Biochemical taxonomy of some problem actinomycetes. Zentralblatt für Bakteriologie, Parasitenkunde, Infektionskrankheiten und Hygiene (Abteilung I) Supplement 6:125–133
    [Google Scholar]
  41. Kubica G. P., Baess I., Gordon R. E., Jenkins P. A., Kwapinski J. B. G., Mcdurmont C., Pattyn S. R., Saito H., Silcox V., Stanford J. L., Takeya K., Tsukamura M. 1972; A comparative numerical analysis of the rapidly growing mycobacteria. Journal of General Microbiology 73:55–70
    [Google Scholar]
  42. Lechevalier M. P. 1976; The taxonomy of the genus Nocardia: some light at the end of the tunnel?. In The Biology of the Nocardiae pp. 1–38 Edited by Goodfellow M., Brownell G. H., Serrano J. A. London: Academic Press;
    [Google Scholar]
  43. Lechevalier M. P., Lechevalier H. A. 1970; Chemical composition as a criterion in the classification of aerobic actinomycetes. International Journal of Systematic Bacteriology 20:435–444
    [Google Scholar]
  44. Lechevalier M. P., De bièvre C., Lechevalier H. A. 1977; Chemotaxonomy of aerobic actinomycetes: phospholipid composition. Biochemical Systematics and Ecology 5:249–260
    [Google Scholar]
  45. Locci R. 1978; Micromorphological development of Actinomyces and of related genera. Zentralblatt für Bakteriologie, Parasitenkunde, Infektionskrankheiten und Hygiene (Abteilung I) Supplement 6:173–180
    [Google Scholar]
  46. Magnusson H. 1923; Spezifische infektiöse Pneumonie beim Fohlen. Ein neuer Eitererreger beim Pferde. Archiv für wissenschaftliche und praktische Tierheilkunde 50:22–38
    [Google Scholar]
  47. Meissner G., Schröder K. H., Amadio G. E., Anz W., Chaparas S., Engel H. W. B., Jenkins P. A., Käppler W., Kleeberg H. H., Kubala E., Kubin M., Lauterbach D., Lind A., Magnusson M., Mikova ZD., Pattyn S. R., Schaefer W. B., Stanford J. L., Tsukamura M., Wayne L. G., Willers I., Wolinsky E. 1974; A co-operative numerical analysis of nonscoto- and nonphotochromogenic slowly growing mycobacteria. Journal of General Microbiology 83:207–235
    [Google Scholar]
  48. Melville T. H. 1965; A study of the overall similarity of certain actinomycetes mainly of oral origin. Journal of General Microbiology 40:309–315
    [Google Scholar]
  49. Minnikin D. E., Goodfellow M. 1976; Lipid composition in the classification and identification of nocardiae and related taxa. In The Biology of the Nocardiae pp. 160–219 Edited by Goodfellow M., Brownell G. H., Serrano J. A. London: Academic Press;
    [Google Scholar]
  50. Minnikin D. E., Goodfellow M. 1978; Polar lipids of nocardioform and related bacteria. Zentralblatt für Bakteriologie, Parasitenkunde, Infektions- krankheiten und Hygiene (Abteilung I) Supplement 6:75–83
    [Google Scholar]
  51. Minnikin D. E., Goodfellow M. 1980; Lipid composition in the classification and identification of acid-fast bacteria. In Microbiological Classification and Identification pp. 189–256 Edited by Goodfellow M., Board R. G. London: Academic Press;
    [Google Scholar]
  52. Minnikin D. E., Patel P. V., Alshamaony L., Goodfellow M. 1977; Polar lipid composition in the classification of Nocardia and related bacteria. International Journal of Systematic Bacteriology 27:104–117
    [Google Scholar]
  53. Minnikin D. E., Goodfellow M., Collins M. D. 1978; Lipid composition in the classification and identification of coryneform and related taxa. In Coryneform Bacteria pp. 85–160 Edited by Bousfield I. J., Callely A. G. London: Academic Press;
    [Google Scholar]
  54. Minnikin D. E., Collins M. D., Goodfellow M. 1979; Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa. Journal of Applied Bacteriology 47:87–95
    [Google Scholar]
  55. Mordarski M., Szyba K., Pulverer G., Goodfellow M. 1976; Deoxyribonucleic acid reassociation in the classification of the ‘rhodochrous’ complex and allied taxa. Journal of General Microbiology 94:235–245
    [Google Scholar]
  56. Mordarski M., Goodfellow M., Szyba K., Pulverer G., Tkacz A. 1977; Classification of the ‘rhodochrous’ complex and allied taxa based upon deoxyribonucleic acid reassociation. International Journal of Systematic Bacteriology 27:31–37
    [Google Scholar]
  57. Mordarski M., Schaal K. P., Tkacz A., Pulverer G., Szyba K., Goodfellow M. 1978a; Deoxyribonucleic acid base composition and homology studies on Nocardia. Zentralblatt für Bakteriologie, Parasitenkunde, Infektionskrankheiten und Hygiene (Abteilung I) Supplement 6:91–97
    [Google Scholar]
  58. Mordarski M., Goodfellow M., Szyba K., Pulverer G., Tkacz A. 1978b; Deoxyribonucleic acid base composition and homology studies on Rhodococcus and allied taxa. Zentralblatt für Bakteriologie, Parasitenkunde, Infektions-krankheiten und Hygiene (Abteilung I) Supplement 6:99–106
    [Google Scholar]
  59. Mordarski M., Goodfellow M., Tkacz A., Pulverer G., Schaal K. P. 1980a; Ribosomal ribonucleic acid similarities in the classification of Rhodococcus and related taxa. Journal of General Microbiology 118:313–319
    [Google Scholar]
  60. Mordarski M., Goodfellow M., Szyba K., Tkacz A., Pulverer G., Schaal K. P. 1980b; Deoxyribonucleic acid reassociation in the classification of the genus Rhodococcus Zopf 1891 (Approved Lists, 1980). International Journal of Systematic Bacteriology 30:521–527
    [Google Scholar]
  61. Morse M. E. 1912; A study of the diphtheria group of organisms by the biometrical method. Journal of Infectious Diseases 11:253–285
    [Google Scholar]
  62. Orchard V. A., Goodfellow M. 1980; Numerical classification of some named strains of Nocardia asteroides and related strains isolated from soil. Journal of General Microbiology 118:295–312
    [Google Scholar]
  63. Pine L. 1970; Classification and phylogenetic relationships of microaerophilic actinomyces. International Journal of Systematic Bacteriology 20:445–474
    [Google Scholar]
  64. Piot P., Van Dyck E., Goodfellow M., Falkow S. 1980; A taxonomic study of Gardnerella vaginalis (Haemophilus vaginalis) Gardner and Dukes 1955. Journal of General Microbiology 119:373–396
    [Google Scholar]
  65. Schaal K. P., Reutersberg H. 1978; Numerical taxonomy of Nocardia asteroides. Zentralblatt für Bakteriologie, Parasitenkunde, Infektions-krankheiten und Hygiene (Abteilung I) Supplement 6:53–62
    [Google Scholar]
  66. Schleifer K. H., Kandler O. 1972; Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriological Reviews 36:407–477
    [Google Scholar]
  67. Skerman V. B. D., Mcgowan V., Sneath P. H. A. 1980; Approved lists of bacterial names. International Journal of Systematic Bacteriology 30:225–420
    [Google Scholar]
  68. Sneath P. H. A. 1957; The application of computers to taxonomy. Journal of General Microbiology 17:201–226
    [Google Scholar]
  69. Sneath P. H. A. 1976; An evaluation of numerical taxonomic techniques in the taxonomy of Nocardia and allied taxa. In The Biology of the Nocardiae pp. 74–101 Edited by Goodfellow M., Brownell G. H., Serrano J. A. London: Academic Press;
    [Google Scholar]
  70. Sneath P. H. A., Johnson R. 1972; The influence on numerical taxonomic similarities of errors in microbiological tests. Journal of General Microbiology 72:377–392
    [Google Scholar]
  71. Sneath P. H. A., Sokal R. R. 1973 Numerical Taxonomy. The Principles of Numerical Classification. San Francisco: W. H. Freeman;
    [Google Scholar]
  72. Snyder M. L., Slawson M. S., Bullock W., Parker R. B. 1967; Studies on oral filamentous bacteria. II. Serological relationships within the genera Actinomyces, Nocardia, Bacterionema and Leptotrichia. Journal of Infectious Diseases 117:341–345
    [Google Scholar]
  73. Sokal R. R., Michener C. D. 1958; A statistical method for evaluating systematic relationships. Kansas University Science Bulletin 38:1409–1438
    [Google Scholar]
  74. Stuart M. R., Pease P. E. 1972; A numerical study on the relationships of Listeria and Erysipelothrix. Journal of General Microbiology 73:551–565
    [Google Scholar]
  75. Suzuki K., Kaneko T., Komagata K. 1981; Deoxyribonucleic acid homologies among coryne-form bacteria. International Journal of Systematic Bacteriology 31:131–138
    [Google Scholar]
  76. Tsukamura M. 1969; Numerical taxonomy of the genus Nocardia. Journal of General Microbiology 56:265–287
    [Google Scholar]
  77. Tsukamura M. 1974; A further numerical taxonomic study of the rhodochrous group. Japanese Journal of Microbiology 18:37–44
    [Google Scholar]
  78. Tsukamura M. 1977; Extended numerical taxonomy study of Nocardia. International Journal of Systematic Bacteriology 27:311–323
    [Google Scholar]
  79. Tsukamura M., Mizuno S., Tsukamura S., Tsukamura J. 1979; Comprehensive numerical classification of 369 strains of Mycobacterium, Rhodococcus and Nocardia. International Journal of Systematic Bacteriology 28:110–129
    [Google Scholar]
  80. Tsyganov V. A., Namestnikova V. P., Krassikova W. V. 1966; DNA composition in various genera of the Actinomycetales. Mikrobiologiya 35:92–95
    [Google Scholar]
  81. Wayne L. G., Dietz T. M., Gernez-Rieux C., Jenkins P. A., Käppler W., Kubica G. P., Kwapinski J. B. G., Meissner G., Pattyn S. R., Runyon E. H., Schröder K. H., Silcox V. A., Tacquet A., Tsukamura M., Wolinsky E. 1971; A co-operative numerical analysis of scotochromogenic slowly growing mycobacteria. Journal of General Microbiology 66:255–271
    [Google Scholar]
  82. Wilkinson B. J., Jones D. 1977; A numerical taxonomic survey of Listeria and related bacteria. Journal of General Microbiology 98:399–421
    [Google Scholar]
  83. Williams S. T., Sharples G. P., Serrano J. A., Serrano A. A., Lacey J. 1976; The micromorphology and fine structure of nocardioform organisms. In The Biology of the Nocardiae pp. 102–140 Edited by Goodfellow M., Brownell G. H., Serrano J. A. London: Academic Press;
    [Google Scholar]
  84. Wishart D. 1968 A Fortran II Program for Numerical Taxonomy. St Andrews: University of St Andrews;
    [Google Scholar]
  85. Yamada K., Komagata K. 1970; Taxonomic studies on coryneform bacteria. III. DNA base composition of coryneform bacteria. Journal of General and Applied Microbiology 16:215–224
    [Google Scholar]
  86. Yamada K., Komagata K. 1972a; Taxonomic studies on coryneform bacteria. V. Classification of coryneform bacteria. Journal of General and Applied Microbiology 18:417–431
    [Google Scholar]
  87. Yamada K., Komagata K. 1972b; Taxonomic studies on coryneform bacteria. IV. Morphological, cultural, biochemical and physiological characteristics. Journal of General and Applied Microbiology 18:399–416
    [Google Scholar]
  88. Yamaguchi T. 1967; Similarity in DNA of variously morphologically distinct actinomycetes. Journal of General and Applied Microbiology 13:63–71
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/micro/10.1099/00221287-128-4-731
Loading
/content/journal/micro/10.1099/00221287-128-4-731
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error