12915_2020_738_MOESM18_ESM.tiff (1.91 MB)
Additional file 18 of The wild species genome ancestry of domestic chickens
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posted on 2020-02-13, 05:22 authored by Raman Lawal, Simon Martin, Koen Vanmechelen, Addie Vereijken, Pradeepa Silva, Raed Al-Atiyat, Riyadh Aljumaah, Joram Mwacharo, Dong-Dong Wu, Ya-Ping Zhang, Paul Hocking, Jacqueline Smith, David Wragg, Olivier HanotteAdditional file 18: Figure S15. A 600 kb (Chr 3: 108325801–108,925,723 bp) introgressed region from Ceylon junglefowl to domestic chicken. A fd plot, B haplotype-based network, C maximum likelihood tree, D Twisst plot and D1 its proportion for each of the three possible topologies, E dXY and F FST. Eth, Sau, SriLanka, Lang, Ked, Sum represent chicken samples from Ethiopia, Saudi Arabia, Sri Lanka, Langshan (China), Kedu Hitam and Sumatra (Indonesia), respectively. CeylonJ is Ceylon junglefowl and targetDom are the introgressed domestic chicken haplotypes (*).
