Published June 5, 2023 | Version 2023.5.0
Software Open

bokulich-lab/RESCRIPt: 2023.5.0

Creators

  • 1. ETH Zürich
  • 2. @Emulate-Energy
  • 3. University of New South Wales
  • 4. University of New Hampshire

Description

What's Changed

  • ENH: @misialq added a new action for fetching whole genomes and taxonomies from NCBI databases, get-ncbi-genomes! 🥳
  • ENH: @mikerobeson added a new action for getting sequence and taxonomy data from GTDB, get-gtdb-data! 🎉
  • MAINT: @mirand863 updated orient-seqs to use VSEARCH orient under the hood for higher efficiency. This has resulted in deprecation of some parameters that are not compatible with orient.

Full Changelog: https://github.com/bokulich-lab/RESCRIPt/compare/2023.2.0...2023.5.0

Files

bokulich-lab/RESCRIPt-2023.5.0.zip

Files (6.4 MB)

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Additional details

Related works

Is supplement to
https://github.com/bokulich-lab/RESCRIPt/tree/2023.5.0 (URL)