Published December 16, 2016
| Version 1.0
Software
Open
statbio/Sargasso: Sargasso - a Python tool to disambiguate mixed-species RNA-seq reads according to their species of origin
Creators
- 1. Institute for Adaptive and Neural Computation, School of Informatics, University of Edinburgh, Scotland, UK, EH8 9AB
Description
Sargasso
Sargasso is a Python tool to disambiguate mixed-species RNA-seq reads according to their species of origin. Given a set of RNA-seq samples containing RNA-seq data originating from two different species, mapped, disambiguated reads are written to per-sample and -species specific output BAM files.
The latest Sargasso documentation can be found here.
Files
statbio/Sargasso-1.0.zip
Files
(21.5 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/statbio/Sargasso/tree/1.0 (URL)