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The Severe Typhoid in Africa Program: Incidences Of Typhoid Fever in Burkina Faso, Democratic Republic of Congo, Ethiopia, Ghana, Madagascar, And Nigeria

20 Pages Posted: 7 Dec 2022

See all articles by Florian Marks

Florian Marks

International Vaccine Institute

Justin Im

International Vaccine Institute

Se Eun Park

International Vaccine Institute

Gideok Pak

International Vaccine Institute

Hyonjin Jeon

International Vaccine Institute

Lady Rosny Wandji Nana

Institut Supérieur des Sciences de la Population

Marie-France Phoba

Institut National de Recherche Biomédicale - Department of Microbiology

Lisette Mbuyi-Kalonji

Institut National de Recherche Biomédicale - Department of Microbiology

Ondari D. Mogeni

International Vaccine Institute

Biruk Yeshitela

Armauer Hansen Research Institute

Ursula Panzner

International Vaccine Institute

Ligia Maria Cruz Espinoza

International Vaccine Institute

Tigist Beyene

Armauer Hansen Research Institute

Michael Owusu Ansah

Kwame Nkrumah University of Science and Technology

Sampson Twumasi-Ankrah

Kwame Nkrumah University of Science and Technology

Melese Yeshambaw

Armauer Hansen Research Institute

Ashenafi Alemu

University of Ibadan - Faculty of Public Health

Oluwafemi Adewusi

University of Ibadan - College of Medicine

Olukemi Adekanmbi

University of Ibadan - College of Medicine

Ellen Higginson

University of Cambridge - Cambridge Institute for Therapeutic Immunology and Infectious Disease

Akinlolu Adepoju

University College Hospital - Department of Community Medicine

Sarah Agbi

University of Ibadan - College of Medicine

Enoch G. Cakpo

Institut Supérieur des Sciences de la Population

Veronica O. Ogunleye

University College Hospital - Department of Community Medicine

Gaëlle Nkoji

Institut National de Recherche Biomédicale - Department of Microbiology

Odion O. Ikhimiukor

University of Ibadan - Department of Pharmaceutical Microbiology

Jules Mbuyamba

Institut National de Recherche Biomédicale - Department of Microbiology

Trevor Toy

International Vaccine Institute

Francis Opoku Agyapong

Kwame Nkrumah University of Science and Technology

Tsiriniaina Jean Luco Razafindrabe

University of Antananarivo - Madagascar Institute for Vaccine Research

Tiana Mirana Raminosoa

University of Antananarivo

Gabriel Nyrienda

International Vaccine Institute

Hyeong Won Seo

International Vaccine Institute

Hyejin Seo

International Vaccine Institute

Mohamadou Siribie

International Vaccine Institute

Megan E. Carey

University of Cambridge - Cambridge Institute for Therapeutic Immunology and Infectious Disease

Michael Owusu

Kwame Nkrumah University of Science and Technology

Christian G. Meyer

Eberhard-Karls University Tübingen - Institute of Tropical Medicine

Ndrainaharimira Rakotozandrindrainy

University of Antananarivo - Madagascar Institute for Vaccine Research

Nimarko Sarpong

Kwame Nkrumah University of Science and Technology

Mathilde Razafindrakalia

University of Antananarivo - Madagascar Institute for Vaccine Research

Ravomialisoa Razafimanantsoa

University of Antananarivo - Madagascar Institute for Vaccine Research

Moussa Ouedraogo

Hôpital Protestant Schiphra

Yeonseon J. Kim

International Vaccine Institute

Raphaël M. Zellweger

International Vaccine Institute

Sophie SY Kang

International Vaccine Institute

Juyeon Park

International Vaccine Institute

John A. Crump

University of Otago - Centre for International Health

Liselotte Hardy

Institute of Tropical Medicine - Department of Clinical Sciences

Jan Jacobs

Institute of Tropical Medicine - Department of Clinical Sciences

Denise Garrett

Sabin Vaccine Institute

Jason Andrews

Stanford University - Division of Infectious Diseases and Geographic Medicine

Nimesh Poudyal

International Vaccine Institute

Deok Ryun Kim

International Vaccine Institute

John D. Clemens

International Vaccine Institute

Stephen G. Baker

University of Cambridge - Cambridge Institute for Therapeutic Immunology and Infectious Disease

Jerome H. Kim

International Vaccine Institute

Gordon Dougan

University of Cambridge - Department of Medicine

Jonathan D. Sugimoto

International Vaccine Institute

Sandra Van Puyvelde

University of Cambridge - Cambridge Institute for Therapeutic Immunology and Infectious Disease

Aderemi Kehinde

University of Ibadan - Department of Medical Microbiology and Parasitology

Oluwafemi A. Popoola

University College Hospital - Department of Community Medicine

Vittal Mogasale

International Vaccine Institute

Robert Breiman

Emory University - Emory Global Health Institute

William MacWright

Public Health Surveillance Group

Abraham Aseffa

Armauer Hansen Research Institute

Birkneh Tilahun Tadesse

International Vaccine Institute

Andrea Haselbeck

International Vaccine Institute

Yaw Adu-Sarkodie

Kwame Nkrumah University of Science and Technology, Ghana - School of Public Health

Mekonnen Teferi

Armauer Hansen Research Institute

Abdramane Soura Bassiahi

Institut Supérieur des Sciences de la Population

Iruka Okeke

University of Ibadan - Faculty of Public Health

Octavie Lunguya-Metila

Institut National de Recherche Biomédicale - Department of Microbiology

Ellis Owusu-Dabo

Kwame Nkrumah University of Science and Technology, Ghana - School of Public Health

Raphaël Rakotozandrindrainy

University of Antananarivo - Madagascar Institute for Vaccine Research

More...

Abstract

Background: The Severe Typhoid in Africa program evaluated the burden of symptomatic typhoid infections and characterized the clinical severity of this disease in six countries - Burkina Faso, the Democratic Republic of the Congo, Ethiopia, Ghana, Madagascar, and Nigeria. 

Methods: A hybrid, hospital-based prospective surveillance was implemented following a standard protocol. Patients presenting with fever (≥37·5°C axillary or ≥38·0°C tympanic) or reporting fever for three consecutive days within the previous seven days were invited to participate in this study. Disease incidence at the population level was estimated using a Bayesian mixture model. 

Findings: A total of 27,866 participants were recruited. Blood cultures were performed for 27,540(99%) of enrolled participants. Clinically significant organisms were detected in 2,055(7%) of these cultures, and 346(17%) Salmonella Typhi were isolated. The overall adjusted incidence per 100,000 person-years of observation (PYO) were highest in Nioko/Polesgo, Burkina Faso (1,189; 95% Confidence Interval [CI], 490–2,490), Kavuaya/Nkandu-1, DRC (348; 95% CI, 259-553) and Imerintsiatosika, Madagascar (168; 95% CI, 135–233), and lowest in Sodo, Ethiopia (23; 95% CI, 10–67). Overall, 46 of 280 (16%) tested isolates showed ciprofloxacin non-susceptibility.

Interpretation: The circulation of resistant isolates and the high incidence of infection (defined as equal or higher than 100 per 100,000 PYO) in five of the six African countries evaluated, indicates the need for rapid dispatch and implementation of effective typhoid conjugate vaccines along with measures designed to improve clean water, sanitation, and hygiene practices.

Funding Information: This research was funded by the Bill & Melinda Gates Foundation [OPP1127988]. INO was an African Research Leader supported by the UK Medical Research Council (MR/L00464X/1).

Declaration of Interests: The authors report no potential conflicts of interest. All authors have submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest. Conflicts that the editors consider relevant to the content of the manuscript have been disclosed.

Ethics Approval Statement: The study was approved by the International Vaccine Institute Institutional Review Board (IRB No. 2015-006); Institute of Tropical Medicine Antwerp Institutional Review Board, Belgium; Universiteit Antwerpen, Comite voor Medische Ethiek, Belgium; Ministère de la Santé du Burkina Faso, Comité d’Ethique pour la Recherche en Santé, Burkina Faso; Comité d’Ethique de l’Ecole de Santé Publique de l’Université de Kinshasa, Democratic Republic of Congo (No ESP/CE/011/2017); AHRI-ALERT Ethics Review Committee (AAERC), National Health Research Ethics Review Committee (NRERC) of Ethiopia; Kwame Nkrumah University of Science and Technology, School of Medical Sciences, Komfo Anokye Teaching Hospital, Committee on Human Research, Publication and Ethics, Ghana; Ministère de la Santé du Repoblikan’l Madagaskar, Comité d’Ethique, Madagascar; University of Ibadan, University College Hospital Ethics Committee (No. UI/EC/16/0369), Ibadan, Nigeria; Ethics Committee, Our Lady of Apostles Catholic Hospital Oluyoro (OLA) (No. OCH/EC/17/05), Ibadan, Nigeria; Oyo State Ethics Review Committee (AD13/479/665A), Nigeria. Ethical review boards reviewed the study annually to ensure continued compliance with the ethical principles and guidelines based on the WHO (2009), the Council for International Organizations of Medical Sciences (2016) and the Declaration of Helsinki (World Medical Association Declaration of Helsinki, 2013).

Written informed consent was obtained from all eligible participants or their legal guardians. The informed consent process included an explanation by study staff about the study purpose, expectations from participants, duration of participation, risks and benefits for participation, confidentiality, right to decline or withdraw from the study, and contact information of study investigators. Participants were asked to sign a statement of consent if they agreed to join the study. If the participant was an infant or child, his or her parent/guardian was asked to sign or thumbprint the statement of consent. If the participant was an adolescent, both the participant and the parent/guardian were asked to sign or thumbprint the statement of consent. If the participant was illiterate, an independent literate witness (where possible, this person should be selected by the participant and had no connection to the study team) was asked to sign or thumbprint the statement of consent..

Keywords: typhoid fever, invasive salmonellosis, sub-saharan Africa, incidence, surveillance, S. Typhi, antimicrobial resistance

Suggested Citation

Marks, Florian and Im, Justin and Park, Se Eun and Pak, Gideok and Jeon, Hyonjin and Wandji Nana, Lady Rosny and Phoba, Marie-France and Mbuyi-Kalonji, Lisette and Mogeni, Ondari D. and Yeshitela, Biruk and Panzner, Ursula and Cruz Espinoza, Ligia Maria and Beyene, Tigist and Owusu Ansah, Michael and Twumasi-Ankrah, Sampson and Yeshambaw, Melese and Alemu, Ashenafi and Adewusi, Oluwafemi and Adekanmbi, Olukemi and Higginson, Ellen and Adepoju, Akinlolu and Agbi, Sarah and Cakpo, Enoch G. and Ogunleye, Veronica O. and Nkoji, Gaëlle and Ikhimiukor, Odion O. and Mbuyamba, Jules and Toy, Trevor and Opoku Agyapong, Francis and Razafindrabe, Tsiriniaina Jean Luco and Raminosoa, Tiana Mirana and Nyrienda, Gabriel and Seo, Hyeong Won and Seo, Hyejin and Siribie, Mohamadou and Carey, Megan E. and Owusu, Michael and Meyer, Christian G. and Rakotozandrindrainy, Ndrainaharimira and Sarpong, Nimarko and Razafindrakalia, Mathilde and Razafimanantsoa, Ravomialisoa and Ouedraogo, Moussa and Kim, Yeonseon J. and Zellweger, Raphaël M. and Kang, Sophie SY and Park, Juyeon and Crump, John A. and Hardy, Liselotte and Jacobs, Jan and Garrett, Denise and Andrews, Jason and Poudyal, Nimesh and Kim, Deok Ryun and Clemens, John D. and Baker, Stephen G. and Kim, Jerome H. and Dougan, Gordon and Sugimoto, Jonathan D. and Van Puyvelde, Sandra and Kehinde, Aderemi and Popoola, Oluwafemi A. and Mogasale, Vittal and Breiman, Robert and MacWright, William and Aseffa, Abraham and Tadesse, Birkneh Tilahun and Haselbeck, Andrea and Adu-Sarkodie, Yaw and Teferi, Mekonnen and Soura Bassiahi, Abdramane and Okeke, Iruka and Lunguya-Metila, Octavie and Owusu-Dabo, Ellis and Rakotozandrindrainy, Raphaël, The Severe Typhoid in Africa Program: Incidences Of Typhoid Fever in Burkina Faso, Democratic Republic of Congo, Ethiopia, Ghana, Madagascar, And Nigeria. Available at SSRN: https://ssrn.com/abstract=4292849 or http://dx.doi.org/10.2139/ssrn.4292849

Florian Marks (Contact Author)

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Justin Im

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Se Eun Park

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Gideok Pak

International Vaccine Institute

Seoul
Korea, Republic of (South Korea)

Hyonjin Jeon

International Vaccine Institute

Seoul
Korea, Republic of (South Korea)

Lady Rosny Wandji Nana

Institut Supérieur des Sciences de la Population ( email )

Marie-France Phoba

Institut National de Recherche Biomédicale - Department of Microbiology ( email )

Lisette Mbuyi-Kalonji

Institut National de Recherche Biomédicale - Department of Microbiology ( email )

Ondari D. Mogeni

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Biruk Yeshitela

Armauer Hansen Research Institute ( email )

Ethiopia

Ursula Panzner

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Ligia Maria Cruz Espinoza

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Tigist Beyene

Armauer Hansen Research Institute ( email )

Ethiopia

Michael Owusu Ansah

Kwame Nkrumah University of Science and Technology ( email )

Department of Biochemistry and Biotiotechnology
KNUST
Kumasi, 233
Ghana

Sampson Twumasi-Ankrah

Kwame Nkrumah University of Science and Technology ( email )

Melese Yeshambaw

Armauer Hansen Research Institute ( email )

Ethiopia

Ashenafi Alemu

University of Ibadan - Faculty of Public Health ( email )

University of Ibadan
Ibadan, OR 10001
Nigeria

Oluwafemi Adewusi

University of Ibadan - College of Medicine ( email )

Olukemi Adekanmbi

University of Ibadan - College of Medicine ( email )

Ellen Higginson

University of Cambridge - Cambridge Institute for Therapeutic Immunology and Infectious Disease ( email )

Akinlolu Adepoju

University College Hospital - Department of Community Medicine ( email )

Sarah Agbi

University of Ibadan - College of Medicine ( email )

Enoch G. Cakpo

Institut Supérieur des Sciences de la Population ( email )

Veronica O. Ogunleye

University College Hospital - Department of Community Medicine ( email )

Gaëlle Nkoji

Institut National de Recherche Biomédicale - Department of Microbiology ( email )

Odion O. Ikhimiukor

University of Ibadan - Department of Pharmaceutical Microbiology ( email )

Jules Mbuyamba

Institut National de Recherche Biomédicale - Department of Microbiology ( email )

Trevor Toy

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Francis Opoku Agyapong

Kwame Nkrumah University of Science and Technology ( email )

Department of Biochemistry and Biotiotechnology
KNUST
Kumasi, 233
Ghana

Tsiriniaina Jean Luco Razafindrabe

University of Antananarivo - Madagascar Institute for Vaccine Research ( email )

Tiana Mirana Raminosoa

University of Antananarivo ( email )

Madagascar

Gabriel Nyrienda

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Hyeong Won Seo

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Hyejin Seo

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Mohamadou Siribie

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Megan E. Carey

University of Cambridge - Cambridge Institute for Therapeutic Immunology and Infectious Disease ( email )

Michael Owusu

Kwame Nkrumah University of Science and Technology ( email )

Department of Biochemistry and Biotiotechnology
KNUST
Kumasi, 233
Ghana

Christian G. Meyer

Eberhard-Karls University Tübingen - Institute of Tropical Medicine ( email )

Ndrainaharimira Rakotozandrindrainy

University of Antananarivo - Madagascar Institute for Vaccine Research ( email )

Nimarko Sarpong

Kwame Nkrumah University of Science and Technology ( email )

Department of Biochemistry and Biotiotechnology
KNUST
Kumasi, 233
Ghana

Mathilde Razafindrakalia

University of Antananarivo - Madagascar Institute for Vaccine Research ( email )

Ravomialisoa Razafimanantsoa

University of Antananarivo - Madagascar Institute for Vaccine Research ( email )

Moussa Ouedraogo

Hôpital Protestant Schiphra ( email )

Yeonseon J. Kim

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Raphaël M. Zellweger

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Sophie SY Kang

International Vaccine Institute

Seoul
Korea, Republic of (South Korea)

Juyeon Park

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

John A. Crump

University of Otago - Centre for International Health ( email )

Liselotte Hardy

Institute of Tropical Medicine - Department of Clinical Sciences ( email )

Jan Jacobs

Institute of Tropical Medicine - Department of Clinical Sciences ( email )

Denise Garrett

Sabin Vaccine Institute ( email )

2000 Pennsylvania Avenue, NW
Suite 7100
Washington, DC 20006
United States

Jason Andrews

Stanford University - Division of Infectious Diseases and Geographic Medicine ( email )

Stanford, CA
United States

Nimesh Poudyal

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Deok Ryun Kim

International Vaccine Institute

Seoul
Korea, Republic of (South Korea)

John D. Clemens

International Vaccine Institute

Seoul
Korea, Republic of (South Korea)

Stephen G. Baker

University of Cambridge - Cambridge Institute for Therapeutic Immunology and Infectious Disease ( email )

Jerome H. Kim

International Vaccine Institute

Seoul
Korea, Republic of (South Korea)

Gordon Dougan

University of Cambridge - Department of Medicine ( email )

Jonathan D. Sugimoto

International Vaccine Institute ( email )

Sandra Van Puyvelde

University of Cambridge - Cambridge Institute for Therapeutic Immunology and Infectious Disease ( email )

Aderemi Kehinde

University of Ibadan - Department of Medical Microbiology and Parasitology ( email )

Oluwafemi A. Popoola

University College Hospital - Department of Community Medicine ( email )

Vittal Mogasale

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Robert Breiman

Emory University - Emory Global Health Institute ( email )

Atlanta, GA
United States

William MacWright

Public Health Surveillance Group ( email )

Abraham Aseffa

Armauer Hansen Research Institute ( email )

Ethiopia

Birkneh Tilahun Tadesse

International Vaccine Institute

Seoul
Korea, Republic of (South Korea)

Andrea Haselbeck

International Vaccine Institute ( email )

Seoul
Korea, Republic of (South Korea)

Yaw Adu-Sarkodie

Kwame Nkrumah University of Science and Technology, Ghana - School of Public Health ( email )

Mekonnen Teferi

Armauer Hansen Research Institute ( email )

Ethiopia

Abdramane Soura Bassiahi

Institut Supérieur des Sciences de la Population ( email )

Iruka Okeke

University of Ibadan - Faculty of Public Health ( email )

University of Ibadan
Ibadan, OR Oyo Stase 10001
Nigeria

Octavie Lunguya-Metila

Institut National de Recherche Biomédicale - Department of Microbiology ( email )

Ellis Owusu-Dabo

Kwame Nkrumah University of Science and Technology, Ghana - School of Public Health ( email )

Raphaël Rakotozandrindrainy

University of Antananarivo - Madagascar Institute for Vaccine Research ( email )

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