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BY 4.0 license Open Access Published by De Gruyter (O) July 21, 2020

Crystal structure of [(Z)-O-isopropyl N-(4-chlorophenyl)thiocarbamato-κS]-(triphenylphosphine-κP)-gold(I), C28H26AuClNOPS

  • Chien Ing Yeo and Edward R.T. Tiekink ORCID logo EMAIL logo

Abstract

C28H26AuClNOPS, monoclinic, P21/c (no. 14), a = 9.7445(3) Å, b = 12.4105(4) Å, c = 21.9727(9) Å, β = 100.113(1)°, V = 2615.96(16) Å3, Z = 4, Rgt(F) = 0.0292, wRref(F2) = 0.0677, T = 100 K.

CCDC no.: 2014871

The molecular structure is shown in the figure. Table 1 contains crystallographic data and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.

Table 1:

Data collection and handling.

Crystal:Colourless prism
Size:0.11 × 0.05 × 0.05 mm
Wavelength:Mo Kα radiation (0.71073 Å)
μ:5.89 mm−1
Diffractometer, scan mode:SuperNova, ω
θmax, completeness:27.5°, 99%
N(hkl)measured, N(hkl)unique, Rint:10945, 5969, 0.031
Criterion for Iobs, N(hkl)gt:Iobs > 2 σ(Iobs), 4942
N(param)refined:309
Programs:CrysAlisPRO [1], SHELX [2], [3], WinGX/ORTEP [4]
Table 2:

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2).

AtomxyzUiso*/Ueq
Au0.23533(2)0.72519(2)0.20933(2)0.02012(6)
Cl1−0.26566(12)0.62356(10)0.50411(5)0.0395(3)
S10.06582(10)0.71975(8)0.27116(4)0.0217(2)
P10.38311(10)0.72033(8)0.14107(4)0.0193(2)
O1−0.0170(3)0.5995(2)0.17396(11)0.0268(6)
N1−0.1261(3)0.5574(3)0.25471(14)0.0250(7)
C1−0.0384(4)0.6150(3)0.23279(17)0.0230(8)
C2−0.1553(4)0.5758(3)0.31438(18)0.0243(9)
C3−0.1174(4)0.4996(3)0.36066(18)0.0255(9)
H3−0.0681320.4368950.3521200.031*
C4−0.1504(4)0.5135(3)0.41929(18)0.0254(9)
H4−0.1223990.4620500.4510440.031*
C5−0.2253(4)0.6045(3)0.43017(18)0.0265(9)
C6−0.2665(4)0.6798(4)0.38507(18)0.0291(9)
H6−0.3183750.7411560.3934780.035*
C7−0.2317(4)0.6657(3)0.32705(17)0.0258(9)
H7−0.2601050.7177200.2956390.031*
C8−0.0578(4)0.4957(3)0.14389(18)0.0282(9)
H8−0.1140920.4532960.1694250.034*
C9−0.1445(5)0.5196(4)0.0811(2)0.0372(11)
H9A−0.2287310.5589400.0865050.056*
H9B−0.1708450.4517860.0593430.056*
H9C−0.0899290.5635060.0569950.056*
C100.0772(5)0.4367(4)0.1403(2)0.0344(10)
H10A0.1309610.4274280.1820750.052*
H10B0.1319220.4787880.1153450.052*
H10C0.0559230.3659180.1212380.052*
C110.2890(4)0.7543(3)0.06469(18)0.0228(9)
C120.3547(5)0.8043(3)0.02080(18)0.0280(9)
H120.4510660.8214620.0302420.034*
C130.2774(5)0.8288(3)−0.03711(18)0.0312(10)
H130.3209190.864719−0.0668210.037*
C140.1371(5)0.8011(3)−0.05185(18)0.0295(10)
H140.0856920.816259−0.0918030.035*
C150.0730(5)0.7515(3)−0.0080(2)0.0293(10)
H15−0.0228070.732717−0.0182190.035*
C160.1463(4)0.7284(3)0.05079(19)0.0257(9)
H160.1008160.6958940.0809790.031*
C210.4516(4)0.5858(3)0.13356(17)0.0225(8)
C220.4278(4)0.5282(3)0.07861(18)0.0258(9)
H220.3754470.5602420.0426150.031*
C230.4795(5)0.4241(3)0.0754(2)0.0319(10)
H230.4618010.3851400.0376280.038*
C240.5568(4)0.3781(3)0.12777(19)0.0295(9)
H240.5926630.3072810.1258720.035*
C250.5822(4)0.4344(4)0.1827(2)0.0311(10)
H250.6370890.4028540.2182860.037*
C260.5280(4)0.5366(3)0.18616(19)0.0274(9)
H260.5426430.5738870.2245270.033*
C310.5317(4)0.8109(3)0.15445(17)0.0225(8)
C320.5067(4)0.9193(3)0.16440(18)0.0267(9)
H320.4146120.9433080.1655240.032*
C330.6166(5)0.9926(4)0.17272(19)0.0320(10)
H330.5992101.0667890.1789580.038*
C340.7513(4)0.9577(3)0.17190(17)0.0276(9)
H340.8261991.0077120.1776150.033*
C350.7764(4)0.8496(3)0.16274(18)0.0291(9)
H350.8688310.8256970.1624000.035*
C360.6672(4)0.7756(3)0.15402(18)0.0258(9)
H360.6850540.7015220.1478310.031*

Source of material

NaOH (0.020 g, 0.50 mmol) in water (5 mL) was added to a suspension of Ph3PAuCl (0.247 g, 0.50 mmol) in acetonitrile (20 mL), followed by addition of iPrOC(=S)N(H)C6H4Cl-4 (0.115 g, 0.50 mmol) in chloroform (20 mL). After stirring for 2 h, the solution was left for slow evaporation at room temperature, yielding colourless crystals after 2 weeks. Yield: 0.313 g (91%). M. pt (Biobase automatic melting point apparatus MP450): 436–439 K. Elemental Analysis for C28H26AuClNOPS (Leco TruSpec Micro CHN Elemental Analyser): C, 48.88; H, 3.81; N, 2.04%. Found: C, 49.06; H, 3.69; N, 2.06%. IR (Bruker Vertex 70v FTIR Spectrophotometer; cm−1): 1436 (s) ν(C=N), 1138 (s) ν(C—O), 1094 (s) ν(C—S). 1H NMR (Bruker Ascend 400 MHz NMR spectrometer with chemical shifts relative to tetramethylsilane in CDCl3 solution at 298 K, ppm): δ 7.54–7.42 (m, br, 15H, Ph3P), 6.97 (dt, 2H, m-aryl-H, 3JHH = 8.60 Hz, 4JHH = 2.46 Hz), 6.75 (dt, 2H, o-aryl-H, 3JHH = 8.56 Hz, 4JHH = 2.45 Hz), 5.26 (sept, 1H, OCH, JHH = 6.20 Hz), 1.32 (d, 6H, CH3, JHH = 6.20 Hz). 13C{1H} NMR (as for 1H NMR): δ 163.8 (Cq), 150.0 (aryl, Cipso), 134.2 (d, m-Ph3P, 3JCP = 13.81 Hz), 131.7 (d, p-Ph3P, 4JCP = 2.34 Hz), 129.4 (d, i-Ph3P, 1JCP = 57.25 Hz), 129.1 (d, o-Ph3P, 2JCP = 11.50 Hz), 128.8 (aryl, Cmeta), 127.3 (aryl, Cpara), 123.4 (aryl, Cortho), 70.6 (OCH), 22.1 (CH3). 31P{1H} NMR (as for 1H NMR but with chemical shift referenced to 85% aqueous H3PO4 as the external reference): δ 38.1.

Experimental details

The C-bound H atoms were geometrically placed (C—H = 0.95–1.00 Å) and refined as riding with Uiso(H) = 1.2–1.5Ueq(C). The maximum and minimum residual electron density peaks of 2.22 and 1.04 eÅ−3, respectively, were located 0.93 and 0.72 Å, respectively, from the Au atom.

Comment

The most studied case of structural mimicry relates to the chloro/methyl exchange whereby structures that differ only by a chloride versus methyl substituent are evaluated for similarity or otherwise [5]. If the chloro/methyl substituents have no major influence the molecular packing, isomorphous relationships might be apparent as the molecular volumes of a chloride atom and a methyl group are close. In this connection, the title phosphanegold(I) thioamide molecule, Ph3PAu[SC(OR)=NC6H4Y-4], for R = iPr and Y = Cl, (I), has been investigated. Related structures with Y = Cl and R = Me [6] and R = Et, isolated as a dichloromethane hemi-solvate [7], are known. The three structures with Y = Me and R = Me [8], R = Et [9] and R = iPr [10] are also available in the literature. Herein, in order to complete the 2 (Y = Cl and Me) × 3 (R = Me, Et and iPr) matrix of Y and R structures, the crystal and molecular structures of (I) are described.

The molecular structure of (I) is shown in the figure (70% displacement ellipsoids) which shows the gold atom to be coordinated by thiolate-S [Au—S1 = 2.3166(10) Å] and phosphane-P [Au—P1 = 2.2551(10) Å] atoms which define an almost linear geometry [P1—Au—S1 = 173.52(3)°]. The crystal structure of the pure acid, i.e. iPrOC(=S)N(H)C6H4Cl-4, is available for comparison [11]. The C1—S1 [1.6708(15) Å] and C1—N1 [1.3388(18) Å] bond lengths in the acid are significantly shorter and longer than the comparable bonds in (I) of 1.769(4) and 1.272(5) Å, respectively. The deviation from the ideal 180° for the P1—Au—S1 angle may be traced to the close approach of the O1 atom towards the gold centre with Au⋯O = 2.900(3) Å.

In the crystal of (I) chlorophenyl-C—H⋯π(P-phenyl) [C4—H4⋯Cg(C11–C16)i: H4⋯Cg(C11–C16)i = 2.67 Å with an angle at H4 = 139° for symmetry operation (i): −x, −1/2 + y, 1/2 − z], P-phenyl-C—H⋯π(chlorophenyl) [C14—H14⋯Cg(C2–C7)ii: H14⋯Cg(C2–C7)ii = 2.92 Å with angle at H14 = 130° and C32—H32⋯Cg(C2–C7)iii: H32⋯Cg(C2–C7)ii = 2.85 Å with an angle at H32 = 150° for (ii) x, 3/2 − y, −1/2 + z and (iii) −x, 1/2 + y, 1/2 − z] and end-on C—Cl⋯π(P-phenyl) [C5—Cl1⋯Cg(C31–C36)iv: Cl1⋯Cg(C31–C36)iv = 3.7658(19) Å with an angle at Cl1 = 170.73(14)° for (iv) −1 + x, 3/2 − y, 1/2 + z] connect molecules into a three-dimensional structure. In this scheme, the chlorophenyl ring accepts two C—H⋯π contacts.

Additional analysis of the molecular packing was conducted whereby the Hirshfeld surfaces were calculated along with the full and delineated two-dimensional fingerprint plots. This was achieved with Crystal Explorer 17 [12] following literature procedures [13]. The analysis shows that over 97% of all surface contacts involve hydrogen with the major contribution coming from non-directional H⋯H contacts at 47.3%. Significant contributions are apparent from H⋯C/C⋯H [26.1%] contacts reflecting, in part, the specified C—H⋯π interactions. Other notable contributions to the calculated surface occur at separations at or beyond the sums of the respective van der Waals radii, e.g. H⋯S/S⋯H [7.1%] and H⋯Cl/Cl⋯H [9.7%]. It is noted C⋯Cl/Cl⋯C contacts contribute 1.8% to the surface.

The unit cell parameters for (I) and the methyl isostere, i.e. Ph3PAu[SC(O-iPr)=NC6H4Me-4] [10], (II), indicate an isostructural relationship. The molecular structures closely resemble each other but, in the molecular packing of (II), the tolyl-methyl group sits in an hydrophobic pocket and does not participate in a directional intermolecular contact in contrast to the chloride atom in (I). This difference is reflected in the calculated Hirshfeld surface of (II) where the H⋯H contacts amount to 58.3% of all contacts, which is close to the sum of H⋯H + H⋯Cl/Cl⋯H contacts of (I). It is noted a isostructural relationship also exists for the two R = Me, Y = Cl [6] and Y = Me [8] compounds but, not for the pair of R = Et structures as the Y = Cl species is a hemi-dichloromethane solvate [7] while the Y = Me compound was characterised solvent-free.

Acknowledgements

Sunway University Sdn Bhd is thanked for financial support of this work through Grant No. STR-RCTR-RCCM-001–2019.

References

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Received: 2020-06-22
Accepted: 2020-07-08
Published Online: 2020-07-21
Published in Print: 2020-10-27

©2020 Chien Ing Yeo et al., published by De Gruyter, Berlin/Boston

This work is licensed under the Creative Commons Attribution 4.0 International License.

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