Figures
Figs 5 and 6 are missing black triangles associated with several of the clasped clades. The authors have provided corrected versions here.
A molecular phylogeny of 28S rRNA genes for isolates in the Sordariomycetes was constructed using Bayesian inference. This alignment was generated using MAFFT (v. 7.402) on the CIPRES Science Gateway web server, trimmed using trimAl (v.1.2) and a phylogenetic tree was inferred on the trimmed alignment with a GTR + I + G model using MrBayes (v. 3.2.2) [75–77, 81]. Displayed at each node as a circle in the tree are the Bayesian posterior probabilities (e.g. a black circle represents probabilities greater or equal to 90%, a grey circle represents probabilities greater or equal to 70%, a white circle represents probabilities less than 70%). The names of fungi isolated from Z. marina are shown in green, fungi isolated from other seagrass species are shown in black, and all other fungi are shown in grey. For visualization purposes, selected clades have been collapsed and the number of sequences within that clade is indicated. Collapsed clades are shown in green if the majority of sequences in the clade are from isolates associated with Z. marina, black if the majority of isolates are from other seagrass species, and grey otherwise. Clade names that are followed by an asterisk contain sequences from multiple sources. An expanded version of this phylogeny can be found in S9 Fig. The GenBank accession numbers of the sequences used to build this phylogeny can be found in Tables 1 and S2–S4.
A molecular phylogeny of 28S rRNA genes for isolates in the Dothideomycetes was constructed using Bayesian inference. This alignment was generated using MAFFT (v. 7.402) on the CIPRES Science Gateway web server, trimmed using trimAl (v.1.2) and a phylogenetic tree was inferred on the trimmed alignment with a GTR + I + G model using MrBayes (v. 3.2.2) [75–77, 81]. Displayed at each node as a circle in the tree are the Bayesian posterior probabilities (e.g. a black circle represents probabilities greater or equal to 90%, a grey circle represents probabilities greater or equal to 70%, a white circle represents probabilities less than 70%). The names of fungi isolated from Z. marina are shown in green, fungi isolated from other seagrass species are shown in black, and all other fungi are shown in grey. For visualization purposes, selected clades have been collapsed and the number of sequences within that clade is indicated. Collapsed clades are shown in green if the majority of sequences in the clade are from isolates associated with Z. marina, black if the majority of isolates are from other seagrass species, and grey otherwise. Clade names that are followed by an asterisk contain sequences from multiple sources. An expanded version of this phylogeny can be found in S10 Fig. The GenBank accession numbers of the sequences used to build this phylogeny can be found in Tables 1 and S2–S4.
Reference
- 1. Ettinger CL, Eisen JA (2020) Fungi, bacteria and oomycota opportunistically isolated from the seagrass, Zostera marina. PLoS ONE 15(7): e0236135. https://doi.org/10.1371/journal.pone.0236135 pmid:32697800
Citation: Ettinger CL, Eisen JA (2021) Correction: Fungi, bacteria and oomycota opportunistically isolated from the seagrass, Zostera marina. PLoS ONE 16(5): e0251536. https://doi.org/10.1371/journal.pone.0251536
Published: May 6, 2021
Copyright: © 2021 Ettinger, Eisen. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.