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Effects of Previous Land-Use on Plant Species Composition and Diversity in Mediterranean Forests

Abstract

At some point in their history, most forests in the Mediterranean Basin have been subjected to intensive management or converted to agriculture land. Knowing how forest plant communities recovered after the abandonment of forest-management or agricultural practices (including livestock grazing) provides a basis for investigating how previous land management have affected plant species diversity and composition in forest ecosystems. Our study investigated the consequences of historical “land management” practices on present-day Mediterranean forests by comparing species assemblages and the diversity of (i) all plant species and (ii) each ecological group defined by species’ habitat preferences and successional status (i.e., early-, mid-, and late-successional species). We compared forest stands that differed both in land-use history and in successional stage. In addition, we evaluated the value of those stands for biodiversity conservation. The study revealed significant compositional differentiation among stands that was due to among-stand variations in the diversity (namely, species richness and evenness) of early-, intermediate-, and late-successional species. Historical land management has led to an increase in compositional divergences among forest stands and the loss of late-successional forest species.

Introduction

Most of today’s unmanaged Mediterranean forests were once under intensive management [13]. Since antiquity, those forests have been extensively cleared, and the rate of forest loss accelerated in the 18th and 19th C. [4]. In Euro-Mediterranean countries, in particular, many of the natural forests were coppiced for timber and firewood, which created coppices that differed in their management intensity and the time since coppicing had ceased.

On the other hand, changes in socioeconomics and production systems in the late 19th C. and early 20th C. resulted in the abandonment and subsequent afforestation (both spontaneously and through planting) of the poorest arable lands and many pastures [57]. In many regions, abandonment and forest encroachment occurred in several phases, which created a complex mix of forest stands that are at different stages of succession [810]. In Spain, as in many other European countries, the largest increase in forest cover on abandoned lands that had been used for agriculture or as pastures occurred in the second half of the 20th C. [11].

In the early 21st C., those human-altered forests have continued to bear the imprint of historical changes in land-use [9]. In particular, the type of prior land-use and intensity have had a strong influence on the characteristics of secondary forest stands [12,13], and the type of historical management has had a similarly strong effect on abandoned coppice stands [14,15]. Furthermore, historical logging, livestock grazing, and agriculture might have affected the diversity and composition of the plant communities in those forests [8,9,16]. The plant community differs depending on the time since human disturbance has ceased. Classifying the plant species (e.g. early-, intermediate-, and late-successional species) found within the successional stages can increase our understanding of the successional dynamics [8,17]. Investigating how plant species diversity and composition differ among forest stands that have different land-use histories and are at different successional stages can increase our understanding of the consequences of past land-use on plant communities in these forests and provides a basis for predicting the responses of the communities to future disturbances and environmental changes. Furthermore, given the increase in human-altered forests in the Mediterranean Basin [1], a greater understanding of the contribution that these forests can make to biodiversity conservation is crucial [18].

Plant diversity and compositional differences between primarily old growth forests and secondary growth forests [6,10,19,20] and between managed and unmanaged forests [4,21,22] have been well studied; however, published studies of formerly managed forests and secondary growth forests in Mediterranean environments are rare. Studies have emphasized the importance of anthropogenic disturbances in fostering the establishment of early-successional species to the disadvantage of forest specialists [23]. A recent review [14] found that a comparison between two types of forest management (even-aged vs. uneven-aged) did not provide a clear pattern that could predict the plant diversity response; however, other studies have shown that uneven-aged stands have the capacity to maintain high plant diversity [15].

Our study was conducted in oak forests that included formerly managed stands and secondary forest stands that differed in their structural properties. The main objective was to investigate the effects of previous forest management and agricultural activities (including livestock grazing) on contemporary forest plant communities. Specifically, we first assessed the effects of stand history (abandoned coppices vs. secondary growth stands), stand age (young vs. old), age structure of the forest stand (even-aged vs. uneven-aged stands), and the extent of the canopy cover on plant species composition. Secondly, we assessed whether those factors affected the species diversity (namely, species richness and evenness) of each ecological group defined by species’ habitat preferences and successional status (i.e. early-, intermediate-, and late-successional species). Previous studies have suggested that diversity as a measure of community response can be deceptive if there are increases or decreases in the number of species in the plant groups; e.g., increases in the abundances of early-successional species might obscure the loss of or decrease in late-successional species [15,24]. Thirdly, we evaluated the value of the oak stands for biodiversity conservation as reflected by their ability to support species that are associated with natural forests (i.e., late-successional species), which can be achieved using indicator species analysis [25,26] that allows the assessment of the strength of the relationship between species abundance and forest type. Previous studies have shown that the potential to develop into forests that are more natural is high in forests that have high diversity in late-successional species [27,28]. We hypothesized that differences in historical land-use have led to the development of forest stands that have contrasting successional trajectories, which increases the floristic differentiation among oak stands [18]. Furthermore, previous land management has reduced the diversity of forest specialists in those oak stands [1,18].

Materials and Methods

Ethics statement

All plant surveys were performed under permits issued by the municipal councils of Nueno and Arguis, and by the Director of the Parque Natural de la Sierra y Cañones de Guara, Aragón, Spain.

Study area

The study was carried out in oak forests at a moderate elevation (800–1000 m a.s.l.) in the Central Pre-Pyrenees, Spain (between 42.32 N and 42.11 N, and 0.31 W and 0.04 W) (Fig 1). Most of the lithology is conglomerate, limestone, marl, and sandstone developed on Eocene flysch sedimentary formations. The climate is transitional sub-Mediterranean; i.e., influenced by continental effects from the north and by milder Mediterranean conditions from the south (i.e., the Ebro Basin). Mean annual precipitation is 1317 ± 302 mm (1915–2005) and mean annual temperature is 11.5 ± 2.8°C (1910–2005) [29].

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Fig 1. Study area.

The location of the study area in Spain (left panel), and the locations of the stands that were surveyed in the Central Pre-Pyrenees (right panel) (AB Abena, AG Arguis, AR Ara, BE Belsué, IB Ibort, IP Ipies, LU Lucera, NO Nocito, RA Rasal, RP Rapun).

https://doi.org/10.1371/journal.pone.0139031.g001

The oak forests (mainly, Quercus faginea) of the Central Pre-Pyrenees are a mosaic of stands that differ in their structure and history. Based on historical land-use, those semi-deciduous oak forests are of two types: abandoned coppice stands (coppices that differed in historical coppicing intensities and time since management abandonment) and secondary growth stands (most of which were established on abandoned farmlands and pastures, primarily, in the second half of the 20th C. [30]). The overstorey canopy of those semi-deciduous oak stands was mostly Q. faginea interspersed with some scattered pines (Pinus sylvestris and Pinus nigra) and evergreen oak (Quercus ilex subsp. ballota). The understory comprised shrubs (mainly, Quercus coccifera, Buxus sempervirens, Genista scorpius, Juniperus communis), forbs (mainly, Aphyllanthes monspeliensis, Arenaria montana, Achillea millefolium), and graminoids (mainly, Brachypodium pinnatum, Carex halleriana, Festuca rubra, Carex flacca, Bromus erectus).

Data collection

Based on historical land-use maps and aerial photographs from 1957 and 2006, we selected ten Q. faginea-dominated stands that were at different successional stages and had different land-use histories [29,30] (Table 1). In 2009 and 2010, during the period of peak growth (May and June), vascular plant species were surveyed in the ten stands. Within each stand, three 500-m linear transects (N = 30 transects) were established. To estimate plant abundance, richness, and species composition within each transect, we used the Point-Intercept Method [31], which involves recording, at 40-cm intervals, the identity of all individuals that are in contact with a vertical nail [32].

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Table 1. Characteristics of the ten Quercus faginea stands surveyed in the Central Pre-Pyrenees, Spain.

https://doi.org/10.1371/journal.pone.0139031.t001

We recorded all of the vascular plants that touched the nail and any overstorey species (including Q. faginea) that was above the nail (S1 Appendix). Plant species that could not be identified with certainty in the field were collected, pressed, and brought to the laboratory for identification by botanists. Species that have traits that make them difficult to distinguish were identified to genus, only. Plant nomenclature followed Flora Iberica [33]. The abundance of each plant species in each transect was calculated as the number of points where the species occurred. In each transect, canopy cover (CANCOV) was estimated based on the relative abundance (%) of woody species (including trees and large shrubs) that were ≥ 1.5 m tall. For each stand, we estimated the age of ~ 40 trees (for details on age estimations see [29]), calculated mean tree-age and the coefficient of variation of tree-age. Two binary variables were derived from the age data: AGE (young vs. old stands) and CVAGE (even-aged vs. uneven-aged stands). Forest type (FORTYPE; secondary growth stands vs. abandoned coppice stands) of each stand was based on observations in the field (see Table 1).

Grouping species by successional status

Analyses based on ecological groups can help to identify the mechanisms that underlie the tree species-plant diversity relationship [34]. In our study, species were clustered within one of three ecological groups based on species’ habitat preferences and successional status [23,35]: Early-successional species (ES), which are shade-intolerant pioneer species that reach maximum abundance in open-canopy and disturbed areas, Intermediate-successional species (IS), which occupy young to mature, open- or closed-canopy forests, but not excessively disturbed habitats, and late-successional species (LS), which are shade tolerant species that reach maximum abundance in mature, closed-canopy, forest interiors (S1 Appendix). To assign each plant species to one of the three ecological groups, we used information in the literature [33,3640], experience in the field, and personal knowledge (Dr. Felipe Martínez-García, botanist).

Statistical analyses

To quantify the effects of the explanatory variables (AGE, CVAGE, FORTYPE, and CANCOV) on species composition, we used a permutational multivariate analysis of variance (PERMANOVA), which is a multivariate, nonparametric analogue of the univariate analysis of variance (MANOVA). The species abundance data (all species included) were subjected to PERMANOVA using the Bray-Curtis distance measure and 10000 permutations. To identify patterns in the compositional variation of plant communities among stand types (i.e., young vs. old, even-aged vs. uneven-aged, secondary growth vs. abandoned coppice stands), we used unconstrained ordination, non-metrical multidimensional scaling (NMDS). In addition, to test for the effect of canopy cover, this variable was plotted as a smooth surface in an ordination diagram.

Differences in species richness and species evenness among stand types (i.e., young vs. old, even-aged vs. uneven-aged, secondary growth vs. abandoned coppice stands) and the relationship between these two measures of diversity and canopy cover were analyzed using ANCOVA, both for all species combined and for each ecological group. To account for spatial dependencies, stand location was included as a random factor in the ANCOVA models. Normality and homogeneity of variance were tested by examining the model residuals versus the fitted plots and the normal q-q plots of the models. The appropriate transformations were used as required.

Indicator species analyses were used to assess the strength of the correlations between plant species and the following forest classes that resulted from the interaction AGE × CVAGE × FORTYP: old even-aged secondary growth stands, old even-aged coppice stands, old uneven-aged secondary growth stands, young even-aged coppice stands, young uneven-aged secondary growth stands, and young uneven-aged coppice stands. Indicator species in each forest class were identified by calculating the indicator values [25] based on plant species abundance (all species included), then we assigned each selected species to an ecological group (i.e., early-, intermediate-, or late-successional species).

The statistical analyses were performed using the programming language R [41]. The PERMANOVA and the NMDS were performed using the R package ‘vegan’ [42], the ANCOVA was performed using the R package ‘nlme’ [43], and the Indicator Species Analysis was performed using the R package ‘indicspecies’ [44].

Results

In the ten oak stands in the Central Pre-Pyrenees, we identified 206 vascular plant species (S1 Appendix). The most abundant species, which comprised 60% of all of the individuals recorded, were Buxus sempervirens (19.17%), Brachypodium pinnatum (13.38%), Aphyllanthes monspeliensis (8.93%), Carex halleriana (5.95%, IS), Genista scorpius (4.50%), Carex flacca (4.10%, IS), and Festuca rubra (3.61%).

The classification of plant species by successional status indicated that most (56%) of the 206 vascular plant species were ES species. Twenty-six percent and 18% of the plants were IS species and LS species, respectively. Genista scorpius (ES), Teucrium chamaedrys (ES), Thymus vulgaris (ES), Buxus sempervirens (IS), Festuca rubra (IS), Amelanchier ovalis (IS), Aphyllanthes monspeliensis (IS), Brachypodium pinnatum (IS), and Rubia peregrina (LS) were the most commonly occurring species (found in all transects) (S1 Appendix).

Factors affecting species composition

The PERMANOVA analysis revealed that plant species composition differed significantly between stand types (i.e., young vs. old, even-aged vs. uneven-aged, secondary growth vs. abandoned coppice stands). In addition, canopy cover “CANCOV” and plant species composition were significantly correlated.

The explanatory variables explained almost 40% of the variation in the composition of plant communities (Table 2). “FORTYPE” explained the largest proportion (15.2%) of the compositional variation, followed by “CANCOV”, which explained 11% of the variation. “AGE” and “CVAGE” each explained ~ 7% of the variation. Fig 2 shows the grouping of plant transects by stand type in the ordination space determined by the NMDS analysis.

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Table 2. Non-parametric MANOVA test for the effects of explanatory variables on the plant species composition of ten Quercus faginea forest stands in the Central Pre-Pyrenees, Spain.

https://doi.org/10.1371/journal.pone.0139031.t002

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Fig 2. Nonparametric multidimensional scaling (NMDS) ordinations.

NMDS diagrams indicating the groupings of the floristic transects by stand type of Quercus faginea in the Central Pre-Pyrenees, Spain: young vs. old stands, even aged vs. uneven aged stands, secondary growth stands vs. abandoned coppice stands. Canopy cover is indicated in the ordination diagram as a smooth surface (below right hand plot).

https://doi.org/10.1371/journal.pone.0139031.g002

Factors affecting the species diversity of each successional species group

Each of the four explanatory variables explained a significant amount of the variation in overall plant species richness and, collectively, they explained >70% of the total variance (Table 3). Based on the variance explained by each variable, “FORTYP” was the most important variable, followed by “CANCOV”, “AGE”, and “CVAGE” (Table 3).

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Table 3. ANCOVA Test for the effects of four explanatory variables on plant species diversity (species richness and evenness) in ten oak stands in the Central Pre-Pyrenees, Spain.

https://doi.org/10.1371/journal.pone.0139031.t003

Secondary growth stands that had been established on abandoned lands, young stands, and uneven-aged stands had the highest plant species richness (Fig 3), which was negatively correlated with “CANCOV” (Fig 4). Using successional species groups, the same trends in species richness were apparent among ES and IS species (Table 3; Figs 3 and 4), although the effect of “AGE” among IS species was not statistically significant (Table 3). None of the explanatory variables had a significant effect on the species richness among LS species (Table 3). Among ES and IS species, evenness was affected by “CANCOV” and, among LS species, “CVAGE” had a significant effect on species evenness (Table 3). Species evenness among LS species was significantly higher in even-aged stands than it was in uneven-aged stands (Fig 3). Furthermore, evenness was positively correlated with “CANCOV” among ES species, but was negatively correlated with “CANCOV” among IS species (Fig 4).

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Fig 3. Influence of predictor variables on plant species diversity in ten oak stands in the Central Pre-Pyrenees, Spain.

Species richness and evenness (AS: all plant species; ES: Early-successional species; IS: Intermediate-successional species; LS: Late-successional species) as influenced by stand age “AGE” (O: old stands; Y: young stands), age structure of stand “CVAGE” (EA: even-aged stands; UEA: Uneven-aged stands), and forest type “FORTYPE” (SF: secondary growth stands; CS: abandoned coppice stands). Boxes that have the same letter did not differ significantly based on ANCOVA.

https://doi.org/10.1371/journal.pone.0139031.g003

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Fig 4. Effects of canopy cover on plant diversity in ten oak stands in the Central Pre-Pyrenees, Spain.

Canopy cover (CANCOV) and species richness and evenness (AS: all plant species; ES: Early-successional species; IS: Intermediate-successional species; LS: Late-successional species).

https://doi.org/10.1371/journal.pone.0139031.g004

Indicator species

Overall, 70 species were significant (p < 0.05) indicator species, and most (39 species) were indicative of young uneven-aged coppice stands, followed by young uneven-aged secondary growth stands (12), old even-aged secondary growth stands (7), old uneven-aged secondary growth stands (7), and young even-aged coppice stands (4) (Table 4, S2 Appendix). One significant indicator species was found in old even-aged coppice stands. LS indicator species occurred in all of the forest classes except old even-aged secondary growth- and coppice-stands; however, young uneven-aged coppice stands harbored the highest number of LS indicator species (Table 4).

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Table 4. The number of early- (ES), intermediate- (IS), and late-successional (LS) Indicator Species identified in each forest class found in the ten Quercus faginea forest stands surveyed in the Central Pre-Pyrenees, Spain.

https://doi.org/10.1371/journal.pone.0139031.t004

Discussion

Our study has demonstrated the importance of previous land-use and forest management in shaping the development of plant species assemblages and the richness and evenness of plant species. Evidently, human-induced disturbances can have a strong influence on plant communities in forest ecosystems, which have been reported elsewhere [8,9,19].

Plant species composition

The oak stands differed significantly in species composition, which underscores the importance of considering compositional differences in addition to differences in diversity parameters [45]. The evenness of all species collectively did not differ significantly among stand types, which indicated that the differences in species composition were not because of differences in species abundances; rather, they were mainly due to differences in species richness. Furthermore, the high overall richness in young stands (vs. old stands), secondary growth stands (vs. abandoned coppice stands), and uneven-aged stands (vs. even-aged stands) suggest that the compositional dissimilarities were not due to species turnover, only, but were the result of species turnover and nestedness [46]. That is, part of the compositional differentiation is due to species replacement and another part is due to differences in richness between stands; i.e., the richest stands have species that are not present in the poorest stands [46].

Plant species diversity

Overall species richness was significantly higher in secondary growth stands than it was in abandoned coppice stands, which might have been because of the high number of ES and IS species in the secondary growth stands, which drove the dissimilarities that were apparent in plant community composition between secondary growth stands and abandoned coppice stands (see above). In stands that developed on abandoned agricultural terraces, the persistence of old-field species might have contributed to the high total richness in these stands [8]. The secondary growth stands in our study area were established on formerly abandoned lands (i.e., agricultural terraces and pastures) that were on relatively flat land, and some were in valley bottoms where the soils have large amounts of nutrients and water [29,47]. Those conditions strongly favor shade-intolerant, ruderal, and competitive species [4], which can increase total richness.

The large number of ES colonizers was responsible for the high species richness in young oak stands, which might have contributed to the differences in the plant species composition of young and old stands (see above). ES species are the first to colonize disrupted or damaged ecosystems [9,48]. In our study, the disappearance (i.e., competitive exclusion) of ES species in the transition from one successional stage to another might have been responsible for the comparatively low overall species richness in old (> 50 yr) stands. The richness of ES and IS species was higher in uneven-aged stands than it was in even-aged stands, which might explain the dissimilarities in the plant community composition of even-aged and uneven-aged stands (see above). Those dissimilarities might have occurred because of the high resource availability caused by the formation of gaps in the canopy of uneven-aged stands [14], which can provide conditions that favor the establishment of ES and IS species [49]. In contrast, in even-aged stands, the structure of the overstorey canopy, the amount of interspecific competition, and the resources available on the forest floor change more dramatically and phases of development occur more uniformly than they do in uneven-aged stands, which might reduce the richness of shade-intolerant species [17], most of which are ES and IS species.

Overall species richness and the species richness of ES and IS species were negatively correlated with the extent of the canopy cover. Many studies have demonstrated the negative effect of canopy closure on shade-intolerant species [50,51]. The reduction in the availability of light as a forest canopy closes can reduce species richness and limit the growth and survival of many species that became established during the stand initiation stage, and allow LS species to persist, only [50,52]. Furthermore, the high abundance of the competitor shrub Buxus sempervirens in stands that have closed canopies might out-compete other shade-intolerant species by reducing the amount of resources (i.e., light, soil nutrients, water) in the understorey (the abundance of this competitor species was positively associated with the extent of the canopy cover). In our study, the explanatory variables did not explain a significant amount of the variation in the richness of LS species, which indicates that the number of LS species did not differ significantly between stand types. Similarly, [23] found that forest stands that differed in management intensity did not differ in the number of LS species. In the oak forests in the Central Pre-Pyrenees, the extent of canopy cover and ES species evenness were positively correlated, perhaps, because canopy closure increases interspecific competition, which can lead to the exclusion of rare species and increase the mortality rate of highly abundant ES species. Probably, the reduction in sunlight caused by canopy closure contributed to a reduction in the evenness of IS species [4]. Furthermore, that reduction might have been due to the greater dominance of the competitor shrub B. sempervirens in stands that had closed canopies.

The evenness of LS species was highest in even-aged stands, which have a more homogeneous structure and are more uniformly limiting in shade and microhabitats than are uneven-aged stands [14,53]. Under those conditions, interspecific competition inhibits the establishment of shade-intolerant species, but favors the establishment of LS species that can thrive in those environments [50,5456], which can increase the abundance of uncommon LS species and, thereby, increase species evenness. Other studies have suggested that facilitation or release from inhibition by preceding successional species, or intrinsic characteristics such as arrival time, growth rate, and the absence of direct interaction with early species might lead to the establishment of LS species [12].

Indicator species

Indicator species analysis revealed that, in the absence of old uneven-aged coppice stands in our study area, young uneven-aged coppice stands have a high value for biodiversity conservation. In addition to harboring the highest number of significant indicator species, those stands included a sizeable portion the LS indicator species (e.g., Brachypodium sylvaticum, Lathyrus linifolius, and Ranunculus repens). We predict that LS species will progressively replace the ES and IS indicator species (e.g., Brachypodium distachyon, Plantago lanceolata, Dactylis glomerata) identified in our study. The chronic fluctuations in resources that occur in the successional process might lead to the reordering of plant species: species loss and colonization by species that are better suited to the new environment (in this case, LS species) [57]. The uneven-aged secondary growth stands, only, harbored significant LS indicator species, and the highest number were in old uneven-aged secondary growth stands (i.e., Cornus sanguinea, Rubia peregrine). Variation in the ages of trees in uneven aged stands increases the variety of habitats, which permits the coexistence of species that have different requirements [14,15]; however, the ability of those stands to provide habitat for LS species makes them very important for biodiversity conservation.

Implications for biodiversity conservation

Agriculture, livestock grazing, and forest coppicing, which were once common types of land management in the Mediterranean Basin, were abandoned in many places in the late 19th C. and 20th C. After the abandonment of marginal agricultural lands, pastures, and coppices, forest stands that differed in land-use histories and structural properties developed. The coexistence of different types of stands can provide heterogeneous habitats that maximize biodiversity conservation at the regional scale [18]. Furthermore, although our study focused on the presence of plant species in previously disturbed oak forests, we recognize that these forests provide vital resources for fauna, ecosystem services, and forest products [58]. Therefore, the conservation of those oak stands might provide ecosystem and economic benefits (e.g., ecotourism) and should be promoted through government incentives and land-use regulations. The uneven-aged oak stands and, specifically, the abandoned uneven-aged coppice stands seem to represent a progression in the transition towards native forests, which increases their importance from a conservation perspective.

Supporting Information

S1 Appendix. Plant species abundance.

Plant species abundance (mean ± SD) in the 10 oak forests surveyed in the Central Pre-Pyrenees, Spain. Successional status: ES, Early-successional species; IS, Intermediate-successional species; LS, Late-successional species.

https://doi.org/10.1371/journal.pone.0139031.s001

(XLSX)

S2 Appendix. Multilevel pattern analysis.

A test of the relationship between plant species and forest class in the 10 oak forests surveyed in the Central Pre-Pyrenees, Spain.

https://doi.org/10.1371/journal.pone.0139031.s002

(DOCX)

Acknowledgments

We thank Arben Q. Alla, Gabriel Sangüesa-Barreda, Guillermo C. Bueno, Benjamin Komac, Maite Gartzia, Hugo Saiz, and Paloma Nuche for assistance in the field. Constructive comments from two anonymous reviewers and Bruce MacWhirter improved the manuscript. Y.K. was funded by a MAEC-AECID grant from the Spanish Agency for International Cooperation and Development, and A.F. was supported by a JAE-doc postdoctoral contract from the framework ‘‘Junta para la Ampliación de Estudios” (Spanish Ministry of Economy and Competitiveness), which was co-financed by the European Social Fund. This study was part of the research project CGL2011-27259 (Spanish Ministry of Economy and Competitiveness and Innovation), which was co-financed by the FEDER.

Author Contributions

Conceived and designed the experiments: YK CLA. Performed the experiments: YK CLA. Analyzed the data: YK AF. Contributed reagents/materials/analysis tools: YK FMG AF CLA. Wrote the paper: YK FMG AF CLA.

References

  1. 1. Barbero M, Bonin G, Loisel R, Quézel P. Changes and disturbances of forest ecosystems caused by human activities in the western part of the mediterranean basin. Vegetatio. 1990;87:151–173.
  2. 2. Bengtsson J, Nilsson SG, Franc A, Menozzi P. Biodiversity, disturbances, ecosystem function and management of European forests. Forest Ecology and Management. 2000;132:39–50.
  3. 3. Vanbergen AJ, Woodcock BA, Watt AD, Niemela J. Effect of land-use heterogeneity on carabid communities at the landscape scale. Ecography. 2005;1:3–16.
  4. 4. Paillet Y, Bergès L, Hjältén J, Odor P, Avon C, Bernhardt-Römermann M, et al. Biodiversity differences between managed and unmanaged forests: meta-analysis of species richness in Europe. Conservation biology. 2010;24:101–112. pmid:20121845
  5. 5. Mather AS, Fairbairn J, Needle CL. The course and drivers of the forest transition: the case of France. Journal of Rural Studies. 1999;15:65–90.
  6. 6. Sciama D, Augusto L, Dupouey J-L, Gonzalez M, Moares Domínguez C. Floristic and ecological differences between recent and ancient forests growing on non-acidic soils. Forest Ecology and Management. 2009;258:600–608.
  7. 7. Verheyen K, Bossuyt B, Hermy M, Tack G. The land use history (1278–1990) of a mixed hardwood forest in western Belgium and its relationship with chemical soil characteristics. Journal of Biogeography. 1999;26:1115–1128.
  8. 8. Flinn KM, Vellend M. Recovery of forest plant communities in post-agricultural landscapes. Frontiers in Ecology and the Environment. 2005;3:243–250.
  9. 9. Hermy M, Verheyen K. Legacies of the past in the present-day forest biodiversity: a review of past land-use effects on forest plant species composition and diversity. Ecological Research. 2007;22:361–371.
  10. 10. Matuszkiewicz JM, Kowalska A, Kozłowska A, Roo-Zielińska E, Solon J. Differences in plant-species composition, richness and community structure in ancient and post-agricultural pine forests in central Poland. Forest Ecology and Management. 2013;310:567–576.
  11. 11. Lasanta T, Arnáez J, Errea MP, Ortigosa L, Ruiz-Flaño P. Mountain pastures, environmental degradation, and landscape remediation: The example of a Mediterranean policy initiative. Applied Geography. 2009;29:308–319.
  12. 12. Carson WP, Schnitzer SA. Tropical forest community ecology. Oxford: Wiley-Blackell. 2008. 491 p.
  13. 13. Gehring C, Denich M, Vlek PLG. Resilience of secondary forest regrowth after slash-and-burn agriculture in central Amazonia. Journal of Tropical Ecology. 2005;21:519–527.
  14. 14. Duguid MC, Ashton MS. A meta-analysis of the effect of forest management for timber on understory plant species diversity in temperate forests. Forest Ecology and Management. 2013;303:81–90.
  15. 15. Smith KJ, Keeton WS, Twery MJ, Tobi DR. Understory plant responses to uneven-aged forestry alternatives in northern hardwood—conifer forests. Canadian Journal of Forest Research. 2008;38:1303–1318.
  16. 16. Berhane A, Totland Ø, Moe SR. Woody plant assemblages in isolated forest patches in a semiarid agricultural matrix. Biodiversity and Conservation. 2013;22:2519–2535.
  17. 17. Oliver CD, Larson BC. Forest stand dynamics. New York: John Wiley&Sons. 1996. 520 p.
  18. 18. Kouba Y, Martínez-García F, de Frutos A, Alados C. Plant β-diversity in human-altered forest ecosystems: the importance of the structural, spatial, and topographical characteristics of stands in patterning plant species assemblages. European Journal of Forest Research. 2014;133:1057–1072.
  19. 19. Baeten L, Hermy M, Van Daele S, Verheyen K. Unexpected understorey community development after 30 years in ancient and post-agricultural forests. Journal of Ecology. 2010;98:1447–1453.
  20. 20. De Frenne P, Baeten L, Graae BJ, Brunet J, Wulf M, Orczewska A, et al. Interregional variation in the floristic recovery of post-agricultural forests. Journal of Ecology. 2010;99:600–609.
  21. 21. Halpern CB, Spies TA. Plant species diversity in natural and managed forests of the Pacific Northwest. Ecological Applications. 1995;5:913–934.
  22. 22. Okland T, Rydgren K, Halvorsen R, Storaunet K, Rolstad J. Variation in environmental conditions, understorey species number, abundance and composition among natural and managed Picea abies forest stands. Forest Ecology and Management. 2003;177:17–37.
  23. 23. Seiwa K, Etoh Y, Hisita M, Masaka K, Imaji A, Ueno N. Roles of thinning intensity in hardwood recruitment and diversity in a conifer, Criptomeria japonica plantation: A 5-year demographic study. Forest Ecology and Management. 2012;269:177–187.
  24. 24. Battles JJ, Shlisky AJ, Barrett RH, Heald RC, Allen-Diaz BH. The effects of forest management on plant species diversity in a Sierran conifer forest. Forest Ecology and Management. 2001;146:211–222.
  25. 25. Dufrene M, Legendre P. Species assemblages and indicator species: the need for a flexible asymmetrical approach. Ecological Monographs. 1997;67:345–366.
  26. 26. De Cáceres M, Font X, Vicente P, Oliva F. Numerical reproduction of traditional classifications and automatic vegetation identification. Journal of Vegetation Science. 2009;20:620–628.
  27. 27. Farwig N, Sajita N, Böhning-Gaese K. High seedling recruitment of indigenous tree species in forest plantations in Kakamega Forest, western Kenya. Forest Ecology and Management. 2009;257:143–150.
  28. 28. Peterken GF. A method for assessing woodland flora for conservation using indicator species. Biological Conservation. 1974;6:239–245.
  29. 29. Kouba Y, Camarero JJ, Alados CL. Roles of land-use and climate change on the establishment and regeneration dynamics of Mediterranean semi-deciduous oak forests. Forest Ecology and Management. 2012;274:143–150.
  30. 30. Kouba Y, Alados CL. Spatio-temporal dynamics of Quercus faginea forests in the Spanish Central Pre-Pyrenees. European Journal of Forest Research. 2012;131:369–379.
  31. 31. Goodall DW. Some considerations in the use of point quadrats for the analysis of vegetation. Australian Journal of Scientific Research Ser B: Biological Sciences. 1952;5:1–41.
  32. 32. Alados CL, Navarro T, Komac B, Pascual V, Martinez F, Cabezudo B, et al. Do vegetation patch spatial patterns disrupt the spatial organization of plant species? Ecological Complexity. 2009;6:197–207.
  33. 33. Castroviejo S, Laínz M, González GL, Montserrat PF. Flora iberica. Plantas vasculares de la Península Ibérica e Islas Baleares. vols 1–8, 10–15, 17–18, 21. Madrid: Real Jardín Botánico, CSIC. 2012
  34. 34. Barbier S, Gosselin F, Balandier P. Influence of tree species on understory vegetation diversity and mechanisms involved—A critical review for temperate and boreal forests. Forest Ecology and Management. 2008;254:1–15.
  35. 35. Ramovs BV, Roberts MR. Response of plant functional groups within plantations and naturally regenerated forests in southern New Brunswick, Canada. Canadian Journal of Forest Research. 2005;35:1261–1276.
  36. 36. Montserrat M, José-María . Flora y Vegetación de la Sierra de Guara (prepirineo aragonés). Zaragoza: Diputación General de Aragón. 1986
  37. 37. Peinado M, Rivas-Martinez . La vegetación de España. Colección Aula Abierta. Madrid: Universidad de Alcalá de Henares. 1987
  38. 38. Sainz H, Morla C, Costa M. Los Bosques Ibéricos. Una interpretación Geobotánica. Madrid Editorial Planeta. 1997
  39. 39. Villar L, Sesé JA, Ferrández JV. Flora del Pirineo aragonés I. Huesca: Consejo de Protección de la Naturaleza de Aragón; Instituto de Estudios Altoaragoneses. 2001
  40. 40. Villar L, Sesé JA, Ferrández JV. Flora del Pirineo aragonés II. Huesca: Consejo de Protección de la Naturaleza de Aragón; Instituto de Estudios Altoaragoneses. 2003
  41. 41. Team RDC. R: A Language and Environment for Statistical Computing. Vienna, Austria: R Foundation for Statistical Computing. 2015
  42. 42. Oksanen J, Blanchet G, Kindt R, Legendre P, Minchin PR, O'Hara RB, et al. vegan: Community Ecology Package. R package version 3.0–0. Available: http://cran.r-project.org/package=vegan. 2012
  43. 43. Pinheiro J, Bates D, DedRoy S, Sarkar D, R-core . nlme: Linear and Nonlinear Mixed Effects Models. R package version 3.1–111. 2013
  44. 44. De Cáceres M, Legendre P, Wiser SK, Brotons L. Using species combinations in indicator value analyses. Methods in Ecology and Evolution. 2012;3:973–982.
  45. 45. Calviño-Cancela M, Rubido-Bará M, van Etten EJB. Do eucalypt plantations provide habitat for native forest biodiversity? Forest Ecology and Management. 2012;270:153–162.
  46. 46. Baselga A. The relationship between species replacement, dissimilarity derived from nestedness, and nestedness. Global Ecology and Biogeography. 2012;21:1223–1232.
  47. 47. Lasanta T, García-Ruiz JM, Pérez-Rontomé C, Sancho-Marcén C. Runoff and sediment yield in a semi-arid environment: the effect of land management after farmland abandonment. Catena. 2000;38:265–278.
  48. 48. Schmiedinger A, Kreyling J, Steinbauer MJ, Macdonald SE, Jentsch A, Beierkuhnlein C. A continental comparison indicates long-term effects of forest management on understory diversity in coniferous forests. Canadian Journal of Forest Research. 2012;42:1239–1252.
  49. 49. Fahey RT, Puettmann KJ. Ground-layer disturbance and initial conditions influence gap partitioning of understorey vegetation. Journal of Ecology. 2007;95:1098–1109.
  50. 50. Hart SA, Chen HYH. Understory Vegetation Dynamics of North American Boreal Forests. Critical Reviews in Plant Sciences. 2006;25:381–397.
  51. 51. Vockenhuber EA, Scherber C, Langenbruch C, Meißner M, Seidel D, Tscharntke T. Tree diversity and environmental context predict herb species richness and cover in Germany's largest connected deciduous forest. Perspectives in Plant Ecology, Evolution and Systematics. 2011;13:111–119.
  52. 52. Breugel MV, Bongers F, Martínez-Ramos M. Species Dynamics During Early Secondary Forest Succession: Recruitment, Mortality and Species Turnover. Biotropica. 2007;35:610–619.
  53. 53. Bartels SF, Chen HYH. Is understory plant species diversity driven by resource quantity or resource heterogeneity? Ecology. 2010;91:1931–1938. pmid:20715612
  54. 54. Bartemucci P, Messier C, Canham CD. Overstory influences on light attenuation patterns and understory plant community diversity and composition in southern boreal forests of Quebec. Canadian Journal of Forest Research. 2006;36:2065–2079.
  55. 55. Messier C, Parent S, Bergeron Y. Effects of overstory and understory vegetation on the understory light environment in mixed boreal forests. Journal of Vegetation Science. 1998;9:511–520.
  56. 56. Szeicz M, Macdonald M. Recent white spruce dynamics at the subarctic alpine treeline of north-western Canada. Journa of Ecology. 1995;83:873–885.
  57. 57. Smith MD, Knapp AK, Collins SL. A framework for assessing ecosystem dynamics in response to chronic resource alterations induced by global change. Ecology. 2009;90:3279–3289. pmid:20120798
  58. 58. Kouba Y, Alados CL. Spatio-temporal dynamics of Quercus faginea forests in the Spanish Central Pre-Pyrenees. European Journal of Forest Research. 2011;131:369–379.