Skip to main content
Log in

Polymorphism among RFL-PPR homologs in sunflower (Helianthus annuus L.) lines with varying ability for the suppression of the cytoplasmic male sterility phenotype

  • Plant Genetics
  • Published:
Russian Journal of Genetics Aims and scope Submit manuscript

Abstract

A complex comparative genetic approach was used for the investigation of the structural and functional diversity of genes for the restoration of sunflower pollen fertility. It includes (i) hybridological analysis; (ii) analysis of polymorphism among EST fragments homologous to the known Rf genes that contain repeated motives of 35 amino acids (RFL-PPR); (iii) the development of molecular markers. Monogenic segregation in three interline cross combinations and the results of molecular marker analysis confirmed the allelic differences of parental lines in the Mendelian locus for CMS PETl pollen fertility restoration. Introns were found in two RFL-PPR fragments. Two allelic variants of the QHL12D20 fragment were detected among the sixty lines of the sunflower genetic collection. An intron of QHL12D20 fragment was homologous to an intron of the AHBP-1B gene; the product of this gene has a similarity with the transcription factor of the bZIP-family of Arabidopsis. A relationship between the QHL12D20 polymorphism and the functional state of the Rf1 locus was revealed.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Ivanov, M.K. and Dymshits, G.M., Cytoplasmic male sterility and restoration of pollen fertility in higher plants, Russ. J. Genet., 2007, vol. 43, no. 4, pp. 354–368.

    Article  CAS  Google Scholar 

  2. Lurin, C., Andres, C., Aubourg, S., et al., Genomewide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis, Plant Cell, 2004, vol. 16, no. 8, pp. 2089–2103.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  3. Yurina, N.P. and Odintsova, M.S., Signal transduction pathways of plant mitochondria: retrograde regulation, Russ. J. Plant Physiol., 2010, vol. 57, no. 1, p. 7–19.

    Article  CAS  Google Scholar 

  4. Bentolila, S., Alfonso, A.A., and Hanson, M.R., A pentatricopeptide repeat-containing gene restores fertility to cytoplasmic male-sterile plants, Proc. Natl. Acad. Sci. U.S.A., 2002, no. 16, pp. 10887–10892.

    Google Scholar 

  5. Horn, R., Recombination: cytoplasmic male sterility and fertility restoration in higher plants, in Progress in Botany, Esser, K., Lüttge, U., Beyschlag, W., and Murata, J., Eds., 2006, vol. 67, pp. 31–52.

    Article  CAS  Google Scholar 

  6. Fujii, S., Bond, Ch.S., and Small, I.D., Selection patterns on restorer-like genes reveals a conflict between nuclear and mitochondrial genomes throughout angiosperm evolution, Proc. Natl. Acad. Sci. U.S.A., 2011, vol. 108, no. 4, pp. 1723–1728.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  7. Andres, C., Lurin, C., and Small, I.D., The multifarious roles of PPR proteins in plant mitochondrial gene expression, Physiol. Plant., 2007, vol. 129, no. 1, pp. 14–22.

    Article  CAS  Google Scholar 

  8. Rieseberg, L.H. and Blackman, B.K., Speciation genes in plants, Ann. Bot., 2010, vol. 106, no. 3, pp. 439–455.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  9. Leclercq, P., Une sterilite cytoplasmique chez le tournesol, Ann. Amelior. Plant, 1969, vol. 19, no. 3, pp. 99–106.

    Google Scholar 

  10. Fick, G.N. and Zimmer, D.E., Fertility restoration in confectionery sunflowers, Crop Sci., 1974, vol. 14, no. 4, pp. 603–604.

    Article  Google Scholar 

  11. Anaschenko, A.V. and Duca, M.V., Studies of sunflower (Helianthus annuus L.) CMS-Rf genetic system: 2. Male fertility restoration in hybrids based on CMSP, Russ. J. Genet., 1985, vol. 21, no. 12, pp. 1999–2004.

    Google Scholar 

  12. Miller, J.F. and Fick, G.N., Genetics of sunflower, in Sunflower Technology and Production, Schneiter, A.A., Ed., Agron. Monogr., 35, Madison, Wis.: ASA, 1997, pp. 441–495.

    Google Scholar 

  13. Yu, J.K., Tang, S., Slabaugh, M.B., et al., Towards a saturated molecular genetic linkage map for cultivated sunflower, Crop Sci., 2003, vol. 43, no. 1, pp. 367–387.

    Article  CAS  Google Scholar 

  14. Horn, R., Kusterer, B., Lazarescu, E., et al., Molecular mapping of the Rf1 gene restoring fertility in PET1-based F1 hybrids in sunflower (Helianthus annuus L.), Theor. Appl. Genet., 2003, vol. 106, no. 4, pp. 599–606.

    CAS  PubMed  Google Scholar 

  15. Anisimova, I.N., Gavrilova, V.A., Rozhkova, V.T., et al., Molecular markers in identification of sunflower pollen fertility restorer genes, Russ. Agric. Sci., 2009, no. 6, pp. 367–370.

    Google Scholar 

  16. Markin, N.V., Tikhonova, M.A., Anisimova, I.N., et al., SCAR-marker of rf1 gene in sunflower lines-restorers of the pollen fertility in hybrids with different CMS types, Maslichn. Kul’t. Nauchno-Tekh. Byull. Vseross. Nauchno-Issled. Inst. Maslichn. Kul’t., 2009, no. 3 (141), pp. 3–6.

    Google Scholar 

  17. Markin, N.V., Gorbachenko, O.F., Tikhonova, M.A., and Usatov, A.V., Codominant markers of Rf1 gene in cultivated sunflower, Maslichn. Kul’t. Nauchno-Tekh. Byull. Vseross. Nauchno-Issled. Inst. Maslichn. Kul’t., 2010, no. 1 (142–143), pp. 3–8.

    Google Scholar 

  18. Usatov, A.V., Markin, N.V., Gorbachenko, F.I., et al., SSR-analysis of genomic DNA in the sunflower CMS-lines, Maslichn. Kul’t. Nauchno-Tekh. Byull. Vseross. Nauchno-Issled. Inst. Maslichn. Kul’t., 2011, no. 1 (146–147), pp. 15–20.

    Google Scholar 

  19. Usatov, A.V., Fedorenko, A.G., Tikhonova, M.A., et al., The ultrastructural features of microsporogenesis in sunflower Helianthus annuus L. with RIG0 type of cytoplasmic male sterility, Maslichn. Kul’t. Nauchno-Tekh. Byull. Vseross. Nauchno-Issled. Inst. Maslichn. Kul’t., 2012, no. 2 (151–152), pp. 29–35.

    Google Scholar 

  20. Yue, B., Miller, J.F., and Hu, J., Experimenting with marker assisted selection in confection sunflower germplasm enhancement, Proceeding of 29th Sunflower Research Forum, 2007, Fargo, Nev. http://www.sunflowernsa.com/research/research-workshop/

    Google Scholar 

  21. Yue, B., Vick, B.A., Cai, X., and Hu, J., Genetic mapping for the Rf1 (fertility restoration) gene in sunflower (Helianthus annuus L.) by SSR and TRAP markers, Plant Breed., 2010, vol. 129, no. 1, pp. 24–28.

    Article  CAS  Google Scholar 

  22. Horn, R. and Hamrit, S., Gene cloning and characterization, in Genetics, Genomics and Breeding of Sunflower, Hu, J., Seiler, G., and Kole, C., Eds., Science Publishers, 2010, pp. 173–219.

    Chapter  Google Scholar 

  23. Gavrilova, V.A., Brach, N.B., Kutuzova, S.N., et al., Genetic collections of oil and fibre crops, Tr. Prikl. Bot., Genet. Sel., 2012, vol. 169, pp. 147–160.

    Google Scholar 

  24. Anisimova, I.N., Alpat’eva, N.V., and Timofeeva, G.I., Screening of plant genetic resources using DNA-markers: basic principles, DNA isolation, PCR, agarose gel electrophoresis, Metodicheskie ukazaniya VIR (Methodical Guidelines of the All-Russian Research Institute of Plant Industry), Radchenko, E.E., Ed., St. Petersburg: Vseross. Inst. Rastenievod., 2010.

    Google Scholar 

  25. Schnabel, U., Engelmann, U., and Horn, R., Development of markers for the use of the PEF1 cytoplasm in sunflower hybrid breeding, Plant Breed., 2008, vol. 6, pp. 541–652.

    Google Scholar 

  26. Tamura, K., Dudley, J., Nei, M., and Kumar, S., MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0, Mol. Biol. Evol., 2007, vol. 24, pp. 1596–1599.

    Article  CAS  PubMed  Google Scholar 

  27. Lakin, G.F., Biometriya (Biometry), Moscow: Vysshaya Shkola, 1990.

    Google Scholar 

  28. Voronova, O.N., Gavrilova, V.A., Tolstaya, T.T., and Rozhkova, V.T., Estimation of pollen fertility in a number of wild perennial species and specimens from the collection of All-Russian Research Institute of Plant Industry sunflower growing at the Kuban station, Tr. Prikl. Bot., Genet. Sel., 2011, vol. 167, pp. 145–158.

    Google Scholar 

  29. Anisimova, I.N., Gavrilova, V.A., Rozhkova, V.T., et al., Genetic diversity of sources of sunflower pollen fertility restorer genes, Russ. Agric. Sci., 2011, vol. 37, no. 3, p. 192–196.

    Article  Google Scholar 

  30. Strasburg, J.L., Kane, N.C., Raduski, A.R., et al., Effective population size is positively correlated with levels of adaptive divergence among annual sunflowers, Mol. Biol. Evol., 2011, vol. 28, no. 5, pp. 1569–1580.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  31. O’Toole, N., Hattori, M., Andres, C., et al., On the expansion of the pentatricopeptide repeat gene family in plants, Mol. Biol. Evol., 2008, vol. 25, no. 6, pp. 1120–1128.

    Article  PubMed  Google Scholar 

  32. Anisimova, I.N., Gavrilova, V.A., Alpat’eva, N.V., et al., Molecular marking of sunflower pollen fertility restorer genes, Tr. Prikl. Bot., Genet. Sel., 2013, vol. 174, pp. 33–43.

    Google Scholar 

  33. Qi, L.I., Seiler, G.J., Vick, B.A., and Gulya, T.J., Genetics and mapping of the R11 gene conferring resistance to recently emerged rust races, tightly linked to male fertility restoration, in sunflower (Helianthus annuus L.), Theor. Appl. Genet., 2012, vol. 125, pp. 921–932.

    Article  CAS  PubMed  Google Scholar 

  34. Murmu, J., Bush, M.J., DeLong, C., et al., Arabidopsis basic leucine-zipper transcription factors TGA9 and TGA10 interact with floral glutaredoxins ROXY1 and ROXY2 and are redundantly required for anther development, Plant Physiol., 2010, vol. 154, no. 3, p. 1492–1504.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  35. Hu, J., Wang, K., Huang, W., et al., The rice pentatricopeptide repeat protein RF5 restores fertility in Hong-Lian cytoplasmic male-sterile lines via a complex with the glycine-rich protein GRP162, Plant Cell, 2012, vol. 24, no. 1, p. 109–122.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to I. N. Anisimova.

Additional information

Original Russian Text © I.N. Anisimova, N.V. Alpatieva, V.T. Rozhkova, E.B. Kuznetsova, A.G. Pinaev, V.A. Gavrilova, 2014, published in Genetika, 2014, Vol. 50, No. 7, pp. 814–824.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Anisimova, I.N., Alpatieva, N.V., Rozhkova, V.T. et al. Polymorphism among RFL-PPR homologs in sunflower (Helianthus annuus L.) lines with varying ability for the suppression of the cytoplasmic male sterility phenotype. Russ J Genet 50, 712–721 (2014). https://doi.org/10.1134/S1022795414070023

Download citation

  • Received:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1134/S1022795414070023

Keywords

Navigation