Skip to main content
Log in

Typing of the closely related strains of euryarchaeal genus Acidiplasma (Thermoplasmatales) using REP-PCR DNA fingerprinting

  • Short Communications
  • Published:
Microbiology Aims and scope Submit manuscript

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

References

  • Golyshina, O.V., Yakimov, M.M., Lünsdorf, H., Ferrer, M., Nimtz, M., Timmis, K.N., Wray, V., Tindall, B.J., and Golyshin, P.N., Acidiplasma aeolicum gen. nov., sp. nov., a euryarchaeon of the family Ferroplasmaceae isolated from a hydrothermal pool, and transfer of Ferroplasma cupricumulans to Acidiplasma cupricumulans comb. nov., Int. J. Syst. Evol. Microbiol., 2009, vol. 59, pp. 2815–2824.

    Article  CAS  PubMed  Google Scholar 

  • Goris, J., Konstantinidis, K.T., Klappenbach, J.A., Coenye, T., Vandamme, P., and Tiedje, J.M., DNA–DNA hybridization values and their relationship to wholegenome sequence similarities, Int. J. Syst. Evol. Microbiol., 2007, vol. 57, pp. 81–91.

    Article  CAS  PubMed  Google Scholar 

  • Ishii, S. and Sadowsky, M.J., Applications of the rep-PCR DNA fingerprinting technique to study microbial diversity, ecology and evolution, Environ. Microbiol., 2009, vol. 11, pp. 733–740.

    Article  CAS  PubMed  Google Scholar 

  • Kondrat’eva, T.F., Ageeva, S.N., Pivovarova, T.A., and Karavaiko, G.I., Restriction profiles of the chromosomal DNA from Acidithiobacillus ferrooxidans strains adapted to different oxidation substrates, Microbiology (Moscow), 2002, vol. 71, no 4, pp. 438–443.

    Article  Google Scholar 

  • Li, W., Raoult, D., and Fournie, P.-E., Bacterial strain typing in the genomic era, FEMS Microbiol. Rev., 2009, vol. 33, pp. 892–916.

    Article  CAS  PubMed  Google Scholar 

  • Muravyov, M.I. and Bulaev A.G., Two-step oxidation of a refractory gold-bearing sulfidic concentrate and the effect of organic nutrients on its biooxidation, Minerals Eng., 2013a, vol. 45, pp. 108–114.

    Article  CAS  Google Scholar 

  • Muravyov, M.I. and Bulaev A.G., A two-step process for the treatment of refractory sulphidic concentrate, Adv. Mater. Res., 2013b, vol. 825, pp. 246–249.

    Article  Google Scholar 

  • Rademaker, J.L.W., Hoste, B., Louws, F.J., Kersters, K., Swings, J., Vauterin, L., Vauterin, P., and De Bruijn, F.J., Comparison of AFLP and rep-PCR genomic fingerprinting with DNA–DNA homology studies: Xanthomonas as a model system, Int. J. Syst. Evol. Microbiol., 2000, vol. 50, pp. 665–677.

    Article  CAS  PubMed  Google Scholar 

  • Rautenbach, G.F., The low potential bioleaching of chalcopyrite with Ferroplasma JTC3, M. Sc. Dissertation, Univ. Johannesburg, 2007.

    Google Scholar 

  • van Baar, B.L., Characterisation of bacteria by matrixassisted laser desorption/ionisation and electrospray mass spectrometry, FEMS Microbiol. Rev., 2000, vol. 24, pp. 193–219.

    Article  PubMed  Google Scholar 

  • van Hille, R.P., van Wyk, N., Froneman, T., and Harrison, S.T.L., Dynamic evolution of the microbial community in BIOX leaching tanks, Adv. Mater. Res., 2013, vol. 825, pp. 331–334.

    Article  Google Scholar 

  • Zhou, H., Zhang, R., Hu, P., Zeng, W., Xie, Y., Wu, C., and Qiu, G., Isolation and characterization of Ferroplasma thermophilum sp. nov., a novel extremely acidophilic, moderately thermophilic archaeon and its role in bioleaching of chalcopyrite, J. Appl. Microbiol., 2008, vol. 105, pp. 591–601.

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to A. G. Bulaev.

Additional information

Original Russian Text © A.G. Bulaev, M.V. Sukhacheva, B.B. Kuznetsov, 2016, published in Mikrobiologiya, 2016, Vol. 85, No. 2, pp. 223–226.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Bulaev, A.G., Sukhacheva, M.V. & Kuznetsov, B.B. Typing of the closely related strains of euryarchaeal genus Acidiplasma (Thermoplasmatales) using REP-PCR DNA fingerprinting. Microbiology 85, 253–256 (2016). https://doi.org/10.1134/S0026261716020041

Download citation

  • Received:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1134/S0026261716020041

Keywords

Navigation