Noisy Oscillations in the Actin Cytoskeleton of Chemotactic Amoeba

Jose Negrete, Jr., Alain Pumir, Hsin-Fang Hsu, Christian Westendorf, Marco Tarantola, Carsten Beta, and Eberhard Bodenschatz
Phys. Rev. Lett. 117, 148102 – Published 29 September 2016
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Abstract

Biological systems with their complex biochemical networks are known to be intrinsically noisy. Here we investigate the dynamics of actin polymerization of amoeboid cells, which are close to the onset of oscillations. We show that the large phenotypic variability in the polymerization dynamics can be accurately captured by a generic nonlinear oscillator model in the presence of noise. We determine the relative role of the noise with a single dimensionless, experimentally accessible parameter, thus providing a quantitative description of the variability in a population of cells. Our approach, which rests on a generic description of a system close to a Hopf bifurcation and includes the effect of noise, can characterize the dynamics of a large class of noisy systems close to an oscillatory instability.

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  • Received 22 February 2016

DOI:https://doi.org/10.1103/PhysRevLett.117.148102

© 2016 American Physical Society

Physics Subject Headings (PhySH)

Physics of Living SystemsStatistical Physics & ThermodynamicsNonlinear Dynamics

Authors & Affiliations

Jose Negrete, Jr.1, Alain Pumir1,2, Hsin-Fang Hsu1, Christian Westendorf1, Marco Tarantola1, Carsten Beta1,3, and Eberhard Bodenschatz1,4,5,*

  • 1Max Planck Institute for Dynamics and Self-Organization (MPIDS), D-37077 Göttingen, Germany
  • 2Laboratoire de Physique, Ecole Normale Supérieure de Lyon, Université de Lyon 1 and Centre National de la Recherche Scientifique, F-69007 Lyon, France
  • 3Institute of Physics and Astronomy, University of Potsdam, D-14476 Potsdam, Germany
  • 4Institute for Nonlinear Dynamics, University of Göttingen, D-37073 Göttingen, Germany
  • 5Laboratory of Atomic and Solid-State Physics and Sibley School of Mechanical and Aerospace Engineering, Cornell University, Ithaca, New York 14853, USA

  • *eberhard.bodenschatz@ds.mpg.de

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Issue

Vol. 117, Iss. 14 — 30 September 2016

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