Elastic Properties of a Single-Stranded Charged Homopolymeric Ribonucleotide

Yeonee Seol, Gary M. Skinner, and Koen Visscher
Phys. Rev. Lett. 93, 118102 – Published 10 September 2004

Abstract

We have investigated the elastic properties of poly(U), homopolymeric single-stranded RNA molecules that lack any base pairing and stacking interactions and conform to a random-coil structure. Using single-molecule stretching experiments we show that the elastic properties are described by a wormlike chain model for polymer elasticity rather than by a freely jointed chain model as is commonly used for single-stranded DNA. At low [Na+], introduction of a scale-dependent persistence length is required to account for electrostatic contributions.

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  • Received 8 December 2003

DOI:https://doi.org/10.1103/PhysRevLett.93.118102

©2004 American Physical Society

Authors & Affiliations

Yeonee Seol1, Gary M. Skinner1, and Koen Visscher1,2

  • 1Department of Physics, University of Arizona, 1118 E. 4th Street, Tucson, Arizona 85721, USA
  • 2Molecular and Cellular Biology, University of Arizona, 1118 E. 4th Street, Tucson, Arizona 85721, USA

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Issue

Vol. 93, Iss. 11 — 10 September 2004

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