Diagnostic utility of genetic testing in patients undergoing renal biopsy

  1. Peter J. Conlon2,3
  1. 1School of Pharmacy and Biomolecular Sciences, Royal College of Surgeons in Ireland, Stephen's Green, Dublin, Ireland D02 YN77;
  2. 2Department of Nephrology and Transplantation, Beaumont Hospital, Dublin 9, Ireland D09 V2N0;
  3. 3Department of Medicine, Royal College of Surgeons in Ireland, Stephen's Green, Dublin, Ireland D02 YN77;
  4. 4Diabetes Complications Research Centre, School of Medicine, University College Dublin, Ireland;
  5. 5Department of Histopathology, Beaumont Hospital, Dublin, Ireland D09 V2N0;
  6. 6Department of Pathology, Royal College of Surgeons in Ireland, Dublin, Ireland D02 YN77;
  7. 7Department of Pathology, Royal College of Surgeons in Ireland, Stephen's Green, Dublin, Ireland D02 YN77;
  8. 8Mater Misericordiae Hospital, Dublin, Ireland D07 K201
  1. Corresponding author: katherinebenson{at}rcsi.com
  1. 9 These authors contributed equally to this work.

Abstract

High-throughput DNA testing is becoming established as a standard diagnostic test in the renal clinic. Previously published studies on cohorts of patients with unexplained chronic kidney disease of a suspected genetic aetiology have suggested a diagnostic yield for genomic sequencing of up to 18%. Here we determine the yield of targeted gene panel in a clinically unscreened cohort of patients referred for percutaneous native renal biopsy. Patients who underwent renal biopsy for investigation of chronic kidney disease were sequenced using a genomic sequencing panel covering 227 genes in which variation is known to be associated with monogenic chronic kidney disease (CKD). Candidate disease-causing variants were assessed for pathogenicity using guidelines from the American College for Medical Genetics and Genomics. Fifty CKD patients were recruited and sequenced. A molecular diagnosis was obtained for two patients (4%). A molecular diagnosis is possible using genomic testing in ∼4% of clinically unscreened patients undergoing renal biopsy. Genetic screening may be useful for diagnosis in a subset of CKD patients but is most valuable when applied to patients with suspected heritable forms of kidney disease.

Footnotes

  • [Supplemental material is available for this article.]

  • Received April 21, 2020.
  • Accepted July 16, 2020.

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