Issue 23, 2014

Interaction in the indole⋯imidazole heterodimer: structure, Franck–Condon analysis and energy decomposition

Abstract

The complex of indole and imidazole has been studied using a combination of theoretical chemistry techniques, with the relevant calculations compared to existing experimental resonant two-photon ionisation data. Results of fitted multidimensional Franck–Condon simulations based on ground and excited state geometry optimizations and harmonic vibrational frequencies confirm that the V-shaped herringbone structure is that observed by experiment. The ground state interaction energy of these important biomolecular building blocks has been evaluated at a benchmark quality level using explicitly correlated coupled cluster theory, and the V-shaped structure is shown to be approximately 2 kcal mol−1 more strongly bound than other possible conformers. The non-covalent interaction energy is decomposed into physical components using symmetry-adapted perturbation theory and it can be seen that although electrostatics dominate the interaction, dispersion plays a vital role in determining the optimal geometry.

Graphical abstract: Interaction in the indole⋯imidazole heterodimer: structure, Franck–Condon analysis and energy decomposition

Supplementary files

Article information

Article type
Paper
Submitted
28 Mar 2014
Accepted
29 Apr 2014
First published
29 Apr 2014

Phys. Chem. Chem. Phys., 2014,16, 11754-11762

Interaction in the indole⋯imidazole heterodimer: structure, Franck–Condon analysis and energy decomposition

J. Grant Hill and A. Das, Phys. Chem. Chem. Phys., 2014, 16, 11754 DOI: 10.1039/C4CP01360C

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