Issue 43, 2013

Proton-bound dimers of 1-methylcytosine and its derivatives: vibrational and NMR spectroscopy

Abstract

Vibrational spectroscopy and NMR demonstrate that the proton-bound dimer of 1-methylcytosine, 1, has an unsymmetrical structure at room temperature. In the gas phase, investigation of isolated homodimer 1 reveals five fundamental NH vibrations by IR Multiple Photon Dissociation (IRMPD) action spectroscopy. The NH⋯N stretching vibration between the two ring nitrogens exhibits a frequency of 1570 cm−1, as confirmed by examination of the proton-bound homodimers of 5-fluoro-1-methycytosine, 2, and of 1,5-dimethylcytosine, 3, which display absorptions in the same region that disappear upon deuterium substitution. 13C, and 15N NMR of the solid iodide salt of 1 confirm the nonequivalence of the two rings in the anhydrous proton-bound homodimer at room temperature. IRMPD spectra of the three possible heterodimers also show NH⋯N stretches in the same domain, and at least one of the heterodimers, the proton-bound dimer of 1,5-dimethylcytosine with 1-methylcytosine, exhibits two bands suggestive of the presence of two tautomers close in energy.

Graphical abstract: Proton-bound dimers of 1-methylcytosine and its derivatives: vibrational and NMR spectroscopy

Supplementary files

Article information

Article type
Paper
Submitted
29 May 2013
Accepted
24 Sep 2013
First published
24 Sep 2013

Phys. Chem. Chem. Phys., 2013,15, 19001-19012

Proton-bound dimers of 1-methylcytosine and its derivatives: vibrational and NMR spectroscopy

H. U. Ung, A. R. Moehlig, R. A. Kudla, L. J. Mueller, J. Oomens, G. Berden and T. H. Morton, Phys. Chem. Chem. Phys., 2013, 15, 19001 DOI: 10.1039/C3CP52260A

To request permission to reproduce material from this article, please go to the Copyright Clearance Center request page.

If you are an author contributing to an RSC publication, you do not need to request permission provided correct acknowledgement is given.

If you are the author of this article, you do not need to request permission to reproduce figures and diagrams provided correct acknowledgement is given. If you want to reproduce the whole article in a third-party publication (excluding your thesis/dissertation for which permission is not required) please go to the Copyright Clearance Center request page.

Read more about how to correctly acknowledge RSC content.

Social activity

Spotlight

Advertisements