Abstract
The complex multistep inhibition of proteinases by alpha1-antitrypsin (α1-AT) was investigated by covalently labeling its unique Cys residue with a ratiometric environment-sensitive fluorescent dye, 6-bromomethyl-2-(2-furanyl)-3-hydroxychromone (BMFC). The binding of BMFC-labeled α1-AT with pancreatic elastase led to significant changes in the dual emission of BMFC. The 8 nm blue shift of one of the bands and ca. 65% change in the intensity ratio of the two emission bands suggested an increased exposure of the labeled Cys-232 residue to the bulk water on complex formation. In contrast, the bacterial V8 proteinase-induced cleavage of the reactive center loop of BMFC-labeled α1-AT did not generate any significant change in the Cys-232 region. Similar experiments with elastase and α1-AT conjugated to the classical environment-sensitive dye, IANBD, confirmed these results but led to much smaller modifications in the emission spectrum. Stopped-flow investigation of the reaction between BMFC-labeled α1-AT and elastase showed both a well-described fast and a new slow step of the inhibition process. The latter step is probably associated with the structural reorganization aimed at stabilizing the final complex. These results present a convenient fluorescence ratiometric approach based on the BMFC label for studies of protein conformational changes.
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Abbreviations
- α1-AT:
-
α1-Antitrypsin (α1-proteinase inhibitor)
- PPE:
-
Porcine pancreatic elastase
- ESIPT:
-
Excited state intramolecular proton transfer
- RCL:
-
Reactive center loop
- BMFC:
-
6-Bromomethyl-2-(2-furanyl)-3-hydroxychromone
- IANBD:
-
N,N′-Dimethyl-N-(iodoacetyl)-N′-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)ethylenediamine
- Hepes:
-
4-(2-Hydroxyethyl) piperazine-1-ethane sulfonic acid
- DMF:
-
N,N-Dimethylformamide
References
J. Potempa, E. Korzus and J. Travis, The serpin superfamily of proteinase inhibitors: structure, function, and regulation, J. Biol. Chem., 1994, 269, 15957–15960.
W. Bode and R. Huber, Natural protein inhibitors and their interaction with proteinases, Eur. J. Biochem., 1992, 204, 433–451.
P. G. Gettins, Serpin structure, mechanism, and function, Chem. Rev., 2002, 102, 4751–4804.
J. C. Whisstock, S. R. R. W. Carrell and A. Lesk, Conformational changes in serpins: I. The, native and cleaved conformations of alpha1-antitrypsin, J. Mol. Biol., 2000, 295, 651–665.
J. A. Huntington, R. J. Read and R. W. Carrell, Structure of a serpin-protease complex shows inhibition by deformation, Nature, 2000, 407, 923–926.
A. Dementiev, J. Dobo and P. G. Gettins, Active site distortion is sufficient for proteinase inhibition by serpins: structure of the covalent complex of alpha1-proteinase inhibitor with porcine pancreatic elastase, J. Biol. Chem., 2006, 281, 3452–3457.
M. Bruch, V. Weiss and J. Engel, Plasma serine proteinase inhibitors (Serpins) exhibit major conformational changes and a large increase in conformational stability upon cleavage at their reactive sites, J. Biol. Chem., 1988, 263, 16626–16630.
K. Katagiri, K. Okada, H. Hattori and M. Yano, Bovine endothelial cell plasminogen activator inhibitor. Purification and heat activation, Eur. J. Biochem., 1988, 176, 81–87.
R. W. Carrell, D. L. Evans and P. E. Stein, Mobile reactive centre of serpins and the control of thrombosis, Nature, 1991, 353, 576–578.
H. Loebermann, R. Tokuoka, J. Deisenhofer and R. Huber, Human α1-Proteinase Inhibitor crystal structure analysis of two crystal modifications, molecular model and preliminary analysis of the implications for function, J. Mol. Biol., 1984, 177, 531–556.
U. Baumann, R. Huber, W. Bode, D. Grosse and M. Lesjak, Crystal structure of cleaved human alpha1-antichymotrypsin at 2.7 A resolution and its comparison with other serpins, J. Mol. Biol., 1991, 218, 595–606.
P. Mellet, C. Boudier, Y. Mely and J. G. Bieth, Stopped flow fluorescence energy transfer measurement of the rate constants describing the reversible formation and the irreversible rearrangement of the elastase-alpha1-proteinase inhibitor complex, J. Biol. Chem., 1998, 273, 9119–9123.
P. Mellet, Y. Mely, L. Hedstrom, M. Cahoon, D. Belorgey, N. Srividya, H. Rubin and J. G. Bieth, Comparative trajectories of active and S195A inactive trypsin upon binding to serpins, J. Biol. Chem., 2002, 277, 38901–38914.
E. Stratikos and P. G. Gettins., Major proteinase movement upon stable serpin-proteinase complex formation, Proc. Natl. Acad. Sci. U. S. A., 1997, 94, 453–458.
E. L. James, J. C. Whisstock, M. G. Gore and S. P. Bottomley, Probing the unfolding pathway of alpha1-antitrypsin, J. Biol. Chem., 1999, 274, 9482–9488.
J. P. Ludeman, J. C. Whisstock, P. C. R. Hopkins, B. F. Le Bonniec and S. P. Bottomley, Structure of a serpin-enzyme complex probed by cysteine substitutions and fluorescence spectroscopy, Biophys. J., 2001, 80, 491–497.
S. Kim, J. Woo, E. J. Seo, M. Yu and S. Ryu, A 2.1 A resolution structure of an uncleaved alpha(1)-antitrypsin shows variability of the reactive center and other loops, J. Mol. Biol., 2001, 306, 109–119.
B. E. Cohen, T. B. McAnaney, E. S. Park, Y. N. Jan, S. G. Boxer and L. Y. Jan, Probing protein electrostatics with a synthetic fluorescent amino acid, Science, 2002, 296, 1700–1703.
S. V. Avilov, C. Bode, F. G. Tolgyesi, A. S. Klymchenko, J. Fidy and A. P. Demchenko, Temperature effects on alpha-crystallin structure probed by 6-bromomethyl-2-(2-furanyl)-3-hydroxychromone, an environmentally sensitive two-wavelength fluorescent dye covalently attached to the single Cys residue, Int. J. Biol. Macromol., 2005, 36, 290–298.
P. K. Sengupta and M. Kasha, Excited state proton-transfer spectroscopy of 3-hydroxyflavone and quercetin, Chem. Phys. Lett., 1979, 68, 382–385.
P. T. Chou, M. L. Martinez, J. H. Clements, J. Phys. Chem., 1993, 97, 2618–2622.
A. S. Klymchenko and A. P. Demchenko, Multiparametric probing of intermolecular interactions with fluorescent dye exhibiting excited state intramolecular proton transfer, Phys. Chem. Chem. Phys., 2003, 5, 461–468.
S. M. Ormson, R. G. Brown, F. Vollmer and W. Rettig, Switching between charge- and proton-transfer emission in the excited state of a substituted 3-hydroxyflavone, J. Photochem. Photobiol., A, 1994, 81, 65–72.
T. C. Swinney and D. F. Kelley, Proton transfer dynamics in substituted 3-hydroxyflavones: Solvent polarization effects, J. Chem. Phys., 1993, 99, 211–221.
A. J. G. Strandjord and P. F. Barbara, The proton-transfer kinetics of 3-hydroxyflavone: solvent effects, J. Phys. Chem., 1985, 89, 2355–2361.
D. McMorrow and M. Kasha, Intramolecular excited-state proton transfer in 3-hydroxyflavone. Hydrogen-bonding solvent perturbations, J. Phys. Chem., 1984, 88, 2235–2243.
A. S. Klymchenko, C. Kenfack, G. Duportail, Y. Mély, Effects of polar protic solvents on dual emissions of 3-hydroxychromones, J. Chem. Sci., 2007, 119, 83–89.
D. McMorrow, M. Kasha, J. Phys. Chem., 1984, 88, 2235–2243.
A. S. Klymchenko, V. V. Shvadchak, D. A. Yushchenko, N. Jain and Y. Mely, Excited-state intramolecular proton transfer distinguishes microenvironments in single- and double-stranded DNA, J. Phys. Chem. B, 2008, 112, 12050–12055.
G. M’Baye, Y. Mely, G. Duportail and A. S. Klymchenko, Liquid ordered and gel phases of lipid bilayers: Fluorescent probes reveal close fluidity but different hydration, Biophys. J., 2008, 95, 1217–1225.
V. V. Shynkar, A. S. Klymchenko, C. Kunzelmann, G. Duportail, C. D. Muller, A. P. Demchenko, J. M. Freyssinet and Y. Mely, Fluorescent biomembrane probe for ratiometric detection of apoptosis, J. Am. Chem. Soc., 2007, 129, 2187–2193.
K. Enander, L. Choulier, A. L. Olsson, D. A. Yushchenko, D. Kanmert, A. S. Klymchenko, A. P. Demchenko, Y. Mely and D. Altschuh, A peptide-based, ratiometric biosensor construct for direct fluorescence detection of a protein analyte, Bioconjugate Chem., 2008, 19, 1864–1870.
A. S. Klymchenko, S. V. Avilov and A. P. Demchenko, Resolution of Cys and Lys labeling of alpha-crystallin with site-sensitive fluorescent 3-hydroxyflavone dye, Anal. Biochem., 2004, 329, 43–57.
D. M. Shotton, in Elastase, Perlmann and Lorand, New York, 1970.
A. S. Klymchenko, G. Duportail, T. Ozturk, V. G. Pivovarenko, Y. Mely and A. P. Demchenko, Novel two-band ratiometric fluorescence probes with different location and orientation in phospholipid membranes, Chem. Biol., 2002, 9, 1199–1208.
G. L. Ellman, Tissue sulfhydryl groups, Arch. Biochem. Biophys., 1959, 82, 70–77.
R. A. Velapoldi and K. D. Mielenz, Standard Reference Materials: A fluorescence standard reference material: quinine sulfate dihydrate, NBS Spec. Publ. (U. S.) 260-64, National Bureau of Standards, Washington, DC, 1980, pp. 25–32.
J. H. Brannon and D. Magde, Absolute quantum yield determination by thermal blooming fluorescein, J. Phys. Chem., 1978, 82, 705–709.
C. Reichardt, Solvatochromic dyes as Solvent Polarity Indicators, Chem. Rev., 1994, 94, 2319–2358.
A. Follenius-Wund, M. Bourotte, M. Schmitt, F. Iyice, H. Lami, J. J. Bourguignon, J. Haiech and C. Pigault, Fluorescent derivatives of the GFP chromophore give a new insight into the GFP fluorescence process, Biophys. J., 2003, 85, 1839–1850.
S. Ye, A. L. Cech, R. Belmares, R. C. Bergstrom, Y. Tong, D. R. Corey, M. R. Kanost and E. J. Goldsmith, The structure of a Michaelis serpin-protease complex, Nat. Struct. Biol., 2001, 8, 979–983.
P. E. Stein and C. Chothia, Serpin tertiary stucture transformation, J. Mol. Biol., 1991, 221, 615–621.
D. J. Tew and S. P. Bottomley, Probing the equilibrium denaturation of the serpin alpha(1)-antitrypsin with single tryptophan mutants; evidence for structure in the urea unfolded state, J. Mol. Biol., 2001, 313, 1161–1169.
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Boudier, C., Klymchenko, A.S., Mely, Y. et al. Local environment perturbations in alpha1-antitrypsin monitored by a ratiometric fluorescent label. Photochem Photobiol Sci 8, 814–821 (2009). https://doi.org/10.1039/b902309g
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DOI: https://doi.org/10.1039/b902309g