Abstract
Simultaneous data acquisition in time-sharing (TS) multi-dimensional NMR experiments has been shown an effective means to reduce experimental time, and thus to accelerate structure determination of proteins. This has been accomplished by spin evolution time-sharing of the X and Y heteronuclei, such as 15N and 13C, in one of the time dimensions. In this work, we report a new 3D TS experiment, which allows simultaneous 13C and 15N spin labeling coherence in both t 1 and t 2 dimensions to give four NOESY spectra in a single 3D experiment. These spectra represent total NOE correlations between 1HN and 1HC resonances. This strategy of double time-sharing (2TS) results in an overall four-fold reduction in experimental time compared with its conventional counterpart. This 3D 2TS CN-CN-H HSQC-NOESY-HSQC pulse sequence also demonstrates improvements in water suppression, 15N spectral resolution and sensitivity, which were developed based on 2D TS CN-H HSQC and 3D TS H-CN-H NOESY-HSQC experiments. Combining the 3D TS and the 3D 2TS NOESY experiments, NOE assignment ambiguities and errors are considerably reduced. These results will be useful for rapid protein structure determination to complement the effort of discerning the functions of diverse genomic proteins.
Similar content being viewed by others
References
Anonymous (1998) Nat. Struct. Biol., 5, 1019-1020.
Bax, A., Clore, G.M., Driscoll, P.C., Gronenborn, A.M., Ikura, M. and Kay, L.E. (1990) J. Magn. Reson., 87, 620-627.
Boelens, R., Burgering, M., Fogh, R.H. and Kaptein, R. (1994) J. Biomol. NMR, 4, 201-213.
Brenner, S.E. (2001) Nat. Rev. Genet., 2, 801-809.
Brutscher, B., Boisbouvier, J., Kupce, E., Tisne, C., Dardel, F., Marion, D. and Simorre, J.P. (2001) J. Biomol. NMR, 19, 141-151.
Cavanagh, J., Fairbrother, W.J., Palmer III, A.G. and Skelton, N.J. (1996) Protein NMR Spectroscopy: Principles and Practice, Academic Press, New York, NY.
Clore, G.M. and Gronenborn, A.M. (1991) Science, 252, 1390-1399.
Clore, G.M., Gronenborn, A.M. and Bax, A. (1998) J. Magn. Reson., 133, 216-221.
Delaglio, F., Grzesiek, S., Vuister, G.W., Zhu, G., Pfeifer, J. and Bax, A. (1995) J. Biomol. NMR, 6, 277-293.
Diercks T., Coles, M. and Kessler, H. (1999) J. Biomol. NMR, 15, 177-180.
Duggan, B.M., Legge, G.B., Dyson, H.J. and Wright, P.E. (2001) J. Biomol. NMR, 19, 321-329.
Emsley, L. and Bodenhausen, G. (1990) Chem. Phys. Lett., 165, 469-476.
Farmer II, B.T. (1991) J. Magn. Reson., 93, 635-641.
Farmer II, B.T. and Mueller, L. (1994) J. Biomol. NMR, 4, 673-687.
Jerala, R. and Rule, G.S. (1995) J. Magn. Reson., B108, 294-298.
Kay, L.E., Clore, G.M., Bax, A. and Gronenborn, A.M. (1990) Science, 249, 411-414.
Kupce, E. and Freeman, R. (1995) J. Magn. Reson., A115, 273-276.
Marion, D., Kay, L.E., Sparks, S.W., Torchia, D.A. and Bax, A. (1989a) J. Am. Chem. Soc., 111, 1515-1517.
Marion, D., Ikura, M., Tschudin, R. and Bax, A. (1989b) J. Magn. Reson., 85, 393-399.
McCoy, M.A. and Mueller, L. (1992a) J. Am. Chem. Soc., 114, 2108-2112.
McCoy, M.A. and Mueller, L. (1992b) J. Magn. Reson., 98, 674-679.
Meissner, A. and Sørensen, O.W. (2000a) J. Magn. Reson., 142, 195-198.
Meissner, A. and Sørensen, O.W. (2000b) J. Magn. Reson., 140, 499-503.
Muhandiram, D.R., Farrow, N., Xu, G.Y., Smallcombe, S.H. and Kay, L.E. (1993) J. Magn. Reson., B102, 317-321.
Nilges, M., Macias, M.J, ODonoghue, S.I. and Oschkinat H. (1997) J. Mol. Biol., 269, 408-422.
Nocek, J.M., Huang, K. and Hoffman, B.M. (2000) Proc. Natl. Acad. Sci. USA, 97, 2538-2543.
Pascal, S.M., Muhandiram, D.R., Yamazaki, T., Forman-Kay, J.D. and Kay, L.E. (1994) J. Magn. Reson., 103, 197-201.
Pervushin, K., Braun, D., Fernandez, C. and Wüthrich, K. (2000) J. Biomol. NMR, 17, 195-202.
Pervushin, K.V., Wider, G., Riek, R. and Wüthrich, K. (1999) Proc. Natl. Acad. Sci. USA, 96, 9607-9612.
Šali, A. (1998) Nat. Struct. Biol., 5, 1029-1032.
Sattler, M., Maurer, M., Schleucher, J. and Griesinger, C. (1995) J. Biomol. NMR, 5, 97-102.
Shaka, A.J., Barker, P.B. and Freeman, R. (1985) J. Magn. Reson., 64, 547-552.
Tjandra, N. and Bax, A. (1997) Science, 278, 1111-1114.
Tjandra, N., Grzesiek, S. and Bax, A. (1996) J. Am. Chem. Soc., 118, 6264-6272.
Vis, H., Boelens, R., Mariani, M., Stroop, R., Vorgias, C.E., Wilson, K.S. and Kaptein, R. (1994) Biochemistry, 33, 14858-14870.
Wagner, G. (1989) Meth. Enzymol., 176, 93.
Xia, Y., Man D. and Zhu, G. (2001) J. Biomol. NMR, 19, 355-360.
Xia, Y., Sze, K. and Zhu, G. (2000) J. Biomol. NMR, 18, 261-268.
Zhang, O. and Forman-Kay, J.D. (1997) Biochemistry, 36, 3959-3970.
Zhu, G., Xia, Y., Sze, K. and Yan, X. (1999) J. Biomol. NMR, 14, 377-381.
Zuiderweg, E.R.P. and Fesik, S.W. (1989) Biochemistry, 28, 2387-2391.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Xia, Y., Yee, A., Arrowsmith, C.H. et al. 1HC and 1HN total NOE correlations in a single 3D NMR experiment. 15N and 13C time-sharing in t 1 and t 2 dimensions for simultaneous data acquisition. J Biomol NMR 27, 193–203 (2003). https://doi.org/10.1023/A:1025407905478
Issue Date:
DOI: https://doi.org/10.1023/A:1025407905478