Elsevier

Virus Research

Volume 290, December 2020, 198175
Virus Research

Review
Zoonotic evolution and implications of microbiome in viral transmission and infection

https://doi.org/10.1016/j.virusres.2020.198175Get rights and content

Highlights

  • Evolutionary lineage of zoonotic viral cross-species transmission of the Coronaviridae.

  • The role of human microbiome in predicting and controlling infectious diseases.

  • Importance of synthetic viruses in the study of viral evolution and transmission.

Abstract

The outbreak and spread of new strains of coronavirus (SARS-CoV-2) remain a global threat with increasing cases in affected countries. The evolutionary tree of SARS-CoV-2 revealed that Porcine Reproductive and Respiratory Syndrome virus 2, which belongs to the Beta arterivirus genus from the Arteriviridae family is possibly the most ancient ancestral origin of SARS-CoV-2 and other Coronaviridae. This review focuses on phylogenomic distribution and evolutionary lineage of zoonotic viral cross-species transmission of the Coronaviridae family and the implications of bat microbiome in zoonotic viral transmission and infection. The review also casts light on the role of the human microbiome in predicting and controlling viral infections. The significance of microbiome-mediated interventions in the treatment of viral infections is also discussed. Finally, the importance of synthetic viruses in the study of viral evolution and transmission is highlighted.

Keywords

Covid-19
Zoonotic evolution
Human microbiome
Viral infection
Zoonotic infection
Synthetic virus

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