Review
Experimental evidence for sparse firing in the neocortex

https://doi.org/10.1016/j.tins.2012.03.008Get rights and content

The advent of unbiased recording and imaging techniques to evaluate firing activity across neocortical neurons has revealed substantial heterogeneity in response properties in vivo, and that a minority of neurons are responsible for the majority of spikes. Despite the computational advantages to sparsely firing populations, experimental data defining the fraction of responsive neurons and the range of firing rates have not been synthesized. Here we review data about the distribution of activity across neuronal populations in primary sensory cortex. Overall, the firing output of granular and infragranular layers is highest. Although subthreshold activity across supragranular neurons is decidedly non-sparse, spikes are much less frequent and some cells are silent. Superficial layers of the cortex may employ specific cell and circuit mechanisms to increase sparseness.

Introduction

The number of neurons in the cerebral cortex has grown throughout phylogeny via an increase in the number of columns that are distributed across the cortical mantle [1]. Given the selective pressure that must have driven the expansion of the cerebral cortex, it is surprising that many neocortical neurons show very low firing rates. The sparse firing of neocortical neurons in vivo was not anticipated by decades of extracellular recordings (but see [2]), where detection of spiking neurons was not difficult. However, accumulating experimental evidence, using non-selective methods to assess the activity of identified, individual neurons, indicates that traditional extracellular recordings may have been strongly biased by selection of the most active cells.

What are the biological mechanisms that underlie the sparse firing of neocortical neurons? Why are there so many neurons if many do not transmit information to a subsequent stage of processing? Are sparse population responses an artifact of anesthesia, a reflection of a quiescent brain state, a consequence of impoverished laboratory animal experience, poor stimulus selection, or an essential feature of neural circuits? Because the spike is the primary mechanism by which information is transmitted in the central nervous system, understanding what factors determine which neurons will spike is of crucial importance.

The computational and energetic advantages of sparsely firing neurons for efficient representation of sensory stimuli have been discussed in other excellent reviews on the subject 3, 4, 5, 6, 7, 8, 9. Sparse sensory-evoked firing has perhaps been most thoroughly investigated in insects 10, 11 and has also been observed in other vertebrates, such as songbirds [12]. Here we focus on experimental evidence in the mammalian neocortex indicating that firing neurons are rare, or that silent neurons are common, and evaluate possible mechanisms that produce or regulate sparse firing. The most convincing experimental data – with post hoc identification of recorded neurons for cell- and layer-assignment – has been obtained from analysis of neurons in rodent primary sensory cortex (but see 13, 14, 15); thus, that material will be reviewed in greatest depth. In addition, we will address how the laminar location of a neuron influences its activity, with special attention to the superficial layers that receive dense innervation from input layers of the neocortex but fire at lower rates. Critical issues required to evaluate hypotheses about sparse firing across neocortical networks will be identified, and experiments to resolve these issues will be proposed.

Section snippets

Schemas for sparseness

The term ‘sparse’ has been widely used to describe the response properties of neocortical neurons. We have schematized different scenarios that give rise to the firing of only a few neurons in the cortical network to provide a framework in which to evaluate experimental data that support these models. There are at least 4 significantly different scenarios that can give the appearance of small ensemble activation, or sparseness (Figure 1). First, trial-to-trial variability in firing output,

Does sparseness exist? The distribution of firing across cortical layers

Compared to sensory-evoked responses at earlier stages of sensory processing, the fraction of stimulus-driven neurons in the neocortex is remarkably reduced. In the thalamus, firing is highly reliable. Individual thalamic neurons are innervated by only 1–2 ganglion cells from the retina or trigeminal nucleus 19, 20, and the overall strength of inputs from a single fiber (∼1 nA) is sufficient to drive a spike in the postsynaptic cell. Although this is a simplification of how inputs drive

Supragranular layers show many silent cells

Low evoked firing-rates in superficial layers have been recorded in a number of electrophysiological experiments (Table 1) 13, 16, 23, 25, 26, 27, 28, 29, 30, 31. For example, in primary auditory cortex of rat, acoustic stimuli failed to modulate firing in approximately half the neurons analyzed, and only 10% of neurons showed an increase in stimulus-evoked firing in awake animals [26].

The optical accessibility of superficial layers means that Ca2+-imaging experiments are feasible and highly

Infragranular layers are less sparse

Despite the fact that the deeper cortical layers represent the major subcortical output layer, and appear to dominate the spiking of the column, there are surprisingly few anatomically identified recordings from deep layers. Layer 5 cells fire more spontaneously during behavior and in response to sensory stimulation than other layers (Table 1) 16, 39, 46. Within layer 5, clear electrophysiological differences have been recorded with thick tufted (layer 5b) firing more than thin tufted (layer

Cell-to-cell differences regulate the size of the responding ensemble: differential wiring of pyramidal neurons

What are the potential circuit and cellular mechanisms that might lead to the consistent activation of particular pyramidal cells? A common property of cortical sensory representations is the broad distribution of thalamic input across many neocortical neurons, where individual synaptic connections are weak [21]. This schema can generate sparse responses in the postsynaptic population because the convergent activation of many presynaptic neurons is required to generate a spike. Indeed,

Cell-to-cell differences regulate the size of the responding ensemble: intrinsic firing properties

Assuming that the population of neurons within a given class or lamina is equivalent, differential firing of neocortical neurons might arise from intrinsic conductances that facilitate firing in some neurons and not others. This could be dynamic, regulated for example by prior activity (e.g. 64, 65, 66), or might be entirely stochastic. Support for this general hypothesis has come from a long history of analysis of the intrinsic firing properties of neocortical neurons 67, 68, 69. Differences

Behavioral state regulates the size of the responding ensemble

Performing an experiment under the appropriate behavioral conditions can have dramatic impact on the sensory response and the size of the responding ensemble (Figure 1c). Animals process sensory information while they are awake and behaving, but the vast majority of in vivo mammalian experiments have been performed on anesthetized or sedated animals. Furthermore, it is often not possible to determine the size of the ensemble because in many cases mean firing-rates (not the fraction of

Cortical states and the size of the responding ensemble

Neocortical neurons are spontaneously active, displaying sub- and supra-threshold oscillations at a broad range of frequencies during different behavioral states [78]. At first glance this activity appears to be large in amplitude (subthreshold oscillations of 20 mV are common during periods of quiet wakefulness in mouse 25, 27, 38, 43, 79 and rat 80, 81 somatosensory cortex), highly variable, and strongly influences the spiking behavior of cortical neurons – not ideal conditions for decoding

Maybe responses are not sparse?

It is important to consider that the relatively small fraction of responsive cells, especially in superficial layers, might be merely an artifact of non-optimal stimulus presentation or impoverished behavioral conditions (Figure 1d). This is more likely in whisker somatosensory cortex, where a typical stimulus consists of deflection of single whisker or of all whiskers by an airpuff – a far cry from how the whiskers might be using during behavior.

Consistent with this, extracellular recordings

Concluding remarks

In summary, it is crucial to confirm that sparse representations are used by the cerebral cortex, before determining the computational advantages of this phenomenon as a coding strategy (Box 3). Significant confusion between instantaneous or population sparseness (Figure 1a) and lifetime sparseness (Figure 1b) must be addressed by long-term recording or imaging studies, where individual neurons can be reliably monitored in the context of rich sensory experience. Few studies have directly

Acknowledgments

Supported by grants from the National Institutes of Health (DA0171-88 to A.L.B.), the Humboldt Foundation (A.L.B.), NeuroCure (A.L.B. and J.F.A.P.), the Swiss–German Research Unit/Barrel Cortex Function Deutsche Forschungs Gemeinschaft, Forschergruppe 134 (J.F.A.P.), and a European Research Council starting grant (J.F.A.P.) We thank Michael Brecht and members of the Barth and Poulet labs for helpful discussion and comments.

References (109)

  • S. Herculano-Houzel

    The human brain in numbers: a linearly scaled-up primate brain

    Front. Hum. Neurosci.

    (2009)
  • R.W. Dykes et al.

    An electrophysiological study of single somatosensory neurons in rat granular cortex serving the limbs: a laminar analysis

    J. Neurophysiol.

    (1988)
  • D. Attwell et al.

    An energy budget for signaling in the grey matter of the brain

    J. Cereb. Blood Flow Metab.

    (2001)
  • H.B. Barlow

    Single units and sensation: a neuron doctrine for perceptual psychology?

    Perception

    (1972)
  • S.B. Laughlin et al.

    Communication in neuronal networks

    Science

    (2003)
  • P. Lennie

    The cost of cortical computation

    Curr. Biol.

    (2003)
  • B.A. Olshausen et al.

    Sparse coding of sensory inputs

    Curr. Opin. Neurobiol.

    (2004)
  • S. Shoham

    How silent is the brain: is there a ‘dark matter’ problem in neuroscience?

    J. Comp. Physiol.

    (2006)
  • J. Wolfe

    Sparse and powerful cortical spikes

    Curr. Opin. Neurobiol.

    (2010)
  • J. Perez-Orive

    Oscillations and sparsening of odor representations in the mushroom body

    Science

    (2002)
  • M. Papadopoulou

    Normalization for sparse encoding of odors by a wide-field interneuron

    Science

    (2011)
  • R.H. Hahnloser

    An ultra-sparse code underlies the generation of neural sequences in a songbird

    Nature

    (2002)
  • I.N. Beloozerova

    Activity of different classes of neurons of the motor cortex during locomotion

    J. Neurosci.

    (2003)
  • A. Burgalossi

    Microcircuits of functionally identified neurons in the rat medial entorhinal cortex

    Neuron

    (2011)
  • J. Epsztein

    Intracellular determinants of hippocampal CA1 place and silent cell activity in a novel environment

    Neuron

    (2011)
  • C.P. de Kock et al.

    Spiking in primary somatosensory cortex during natural whisking in awake head-restrained rats is cell-type specific

    Proc. Natl. Acad. Sci. U.S.A.

    (2009)
  • D.S. Greenberg

    Population imaging of ongoing neuronal activity in the visual cortex of awake rats

    Nat. Neurosci.

    (2008)
  • R. Vincis

    Dense representation of natural odorants in the mouse olfactory bulb

    Nat. Neurosci.

    (2012)
  • D. Arsenault et al.

    Developmental remodelling of the lemniscal synapse in the ventral basal thalamus of the mouse

    J. Physiol.

    (2006)
  • C. Chen et al.

    Developmental remodeling of the retinogeniculate synapse

    Neuron

    (2000)
  • R.M. Bruno et al.

    Cortex is driven by weak but synchronously active thalamocortical synapses

    Science

    (2006)
  • M. Brecht et al.

    Dynamic representation of whisker deflection by synaptic potentials in spiny stellate and pyramidal cells in the barrels and septa of layer 4 rat somatosensory cortex

    J. Physiol.

    (2002)
  • C.P. de Kock

    Layer- and cell-type-specific suprathreshold stimulus representation in rat primary somatosensory cortex

    J. Physiol.

    (2007)
  • W. Mittmann

    Two-photon calcium imaging of evoked activity from L5 somatosensory neurons in vivo

    Nat. Neurosci.

    (2011)
  • S. Crochet et al.

    Correlating whisker behavior with membrane potential in barrel cortex of awake mice

    Nat. Neurosci.

    (2006)
  • T. Hromadka

    Sparse representation of sounds in the unanesthetized auditory cortex

    PLoS Biol.

    (2008)
  • J.F.A. Poulet et al.

    Internal brain state regulates membrane potential synchrony in barrel cortex of behaving mice

    Nature

    (2008)
  • H.A. Swadlow

    Efferent neurons and suspected interneurons in S-1 vibrissa cortex of the awake rabbit: receptive fields and axonal properties

    J. Neurophysiol.

    (1989)
  • H.A. Swadlow

    Efferent neurons and suspected interneurons in binocular visual cortex of the awake rabbit: receptive fields and binocular properties

    J. Neurophysiol.

    (1988)
  • H.A. Swadlow

    Efferent neurons and suspected interneurons in S-1 forelimb representation of the awake rabbit: receptive fields and axonal properties

    J. Neurophysiol.

    (1990)
  • S. Sakata et al.

    Laminar structure of spontaneous and sensory-evoked population activity in auditory cortex

    Neuron

    (2009)
  • K. Ohki

    Functional imaging with cellular resolution reveals precise micro-architecture in visual cortex

    Nature

    (2005)
  • H. Ko

    Functional specificity of local synaptic connections in neocortical networks

    Nature

    (2011)
  • J.N. Kerr

    Spatial organization of neuronal population responses in layer 2/3 of rat barrel cortex

    J. Neurosci.

    (2007)
  • C. Poo et al.

    Odor representations in olfactory cortex: ‘sparse’ coding, global inhibition, and oscillations

    Neuron

    (2009)
  • D.D. Stettler et al.

    Representations of odor in the piriform cortex

    Neuron

    (2009)
  • X. Chen

    A gustotopic map of taste qualities in the mammalian brain

    Science

    (2011)
  • S. Crochet

    Synaptic mechanisms underlying sparse coding of active touch

    Neuron

    (2011)
  • D.H. O’Connor

    Neural activity in barrel cortex underlying vibrissa-based object localization in mice

    Neuron

    (2010)
  • L. Yassin

    An embedded subnetwork of highly active neurons in the neocortex

    Neuron

    (2010)
  • B. Haider

    Synaptic and network mechanisms of sparse and reliable visual cortical activity during nonclassical receptive field stimulation

    Neuron

    (2010)
  • W.E. Vinje et al.

    Sparse coding and decorrelation in primary visual cortex during natural vision

    Science

    (2000)
  • L.J. Gentet

    Membrane potential dynamics of GABAergic neurons in the barrel cortex of behaving mice

    Neuron

    (2010)
  • J. Sawinski

    Visually evoked activity in cortical cells imaged in freely moving animals

    Proc. Natl. Acad. Sci. U.S.A.

    (2009)
  • M. Minderer

    Chronic imaging of cortical sensory map dynamics using a genetically encoded calcium indicator

    J. Physiol.

    (2011)
  • I.D. Manns

    Sub- and suprathreshold receptive field properties of pyramidal neurones in layers 5A and 5B of rat somatosensory barrel cortex

    J. Physiol.

    (2004)
  • Y. Zhou

    Preceding inhibition silences layer 6 neurons in auditory cortex

    Neuron

    (2010)
  • M. Brecht

    Dynamic receptive fields of reconstructed pyramidal cells in layers 3 and 2 of rat somatosensory barrel cortex

    J. Physiol.

    (2003)
  • C.I. Moore et al.

    Spatio-temporal subthreshold receptive fields in the vibrissa representation of rat primary somatosensory cortex

    J. Neurophysiol.

    (1998)
  • Z. Varga

    Dendritic coding of multiple sensory inputs in single cortical neurons in vivo

    Proc. Natl. Acad. Sci. U.S.A.

    (2011)
  • Cited by (0)

    View full text