Elsevier

Tetrahedron Letters

Volume 52, Issue 17, 27 April 2011, Pages 2188-2191
Tetrahedron Letters

Self-assembly of coordinative supramolecular polygons with open binding sites

Dedicated to Professor Harry H. Wasserman on the occasion of his 90th birthday
https://doi.org/10.1016/j.tetlet.2010.11.119Get rights and content

Abstract

The design and synthesis of coordinative supramolecular polygons with open binding sites is described. Coordination-driven self-assembly of 2,6-bis(pyridin-4-ylethynyl)pyridine with 60° and 120° organoplatinum acceptors results in quantitative formation of a supramolecular rhomboid and hexagon, respectively, both bearing open pyridyl binding sites. The structures were determined by multinuclear (31P and 1H) NMR spectroscopy and electrospray ionization (ESI) mass spectrometry, along with a computational study.

Graphical abstract

The design and synthesis of coordinative supramolecular polygons with open binding sites is described. Coordination-driven self-assembly of 2,6-bis(pyridin-4-ylethynyl)pyridine with 60° and 120° organoplatinum acceptors results in quantitative formation of a supramolecular rhomboid and hexagon, respectively, both bearing open pyridyl binding sites.

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Acknowledgment

P.J.S. thanks the NIH (GM-057052) for financial support.

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    The simulated structure of hexagon 4 revealed a chair-like conformation rather than a planar hexagonal one, which might be caused by the slight inward bending of the acetylene units. Another example of a supramolecular hexagonal metallacycles bearing open binding sites was reported in 2011 [83]. A computational study was carried out to estimate the energy difference between supramolecular polygon 6a and its isomers 6b–g. Despite the relatively simple level of theory afforded by Merck molecular force field (MMFF) molecular force calculations, on account of the size of 6a–g, these computational results strongly supported the existence of a hexagonal structure for 6a over its isomers 6b–g. Therefore, only the terminal pyridines of ligand L8 are coordinated at equilibrium (Scheme 4).

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    A Sonogashira coupling of halogenated pyridines to provide C-nucleosides was improved by the co-solvent of HMDS (1,1,1,3,3,3-hexamethyldisilazane) and DMF, perhaps via in situ protection of hydroxy and amino groups by the solvent <H1137>. The coordination-driven self-assembly of 2,6-bis(pyridin-4-ylethynl)pyridine, which was formed by Sonogashira coupling, and organoplatinum acceptors leads to supramolecular polygons with open binding sites <TL2188>. Suzuki–Miyaura coupling of boronic acids with halogenated pyridines and thiophenes was employed to form bis-thienylpyridines which can be eventually transformed via additional Pd-catalyzed reactions into thienylpyridyl oligomers as non-peptidic α-helix mimetics <T6145>.

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