Characterization and application of a novel laccase derived from Bacillus amyloliquefaciens

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Abstract

As the copper-containing enzymes, laccases demonstrate a promising potential in various environmental and industrial applications. In this study, a bacterial strain isolated from soil exhibited the laccase activity, which was subsequently characterized and named as Bacillus amyloliquefaciens TCCC 111018. The novel gene encoding CotA-laccase (lac) was amplified using the genome of B. amyloliquefaciens TCCC 111018 as the template and efficiently and actively expressed in Escherichia coli. The recombinant LAC (rLAC) exhibited its highest activity at 80 °C and pH 5.5 for 2,2′-azino-bis (3-ethylbenzthiazoline-6-sulfonic acid) (ABTS) oxidization and 80 °C and pH 7.0 for 2,6-dimethoxyphenol (2,6-DMP) oxidization. rLAC was stable at up to 60 °C and within the pH ranging from 3.0 to 9.0 when using the substrate ABTS. Furthermore, rLAC demonstrated the relatively high tolerance to NaCl, SDS, and most metal ions. Moreover, rLAC was capable of decolorizing the structurally different azo, anthraquinone, and triphenylmethane with different mediator at 60 °C under pH 5.5, 7.0, and 9.0. Therefore, rLAC would be an ideal candidate for lots of biotechnological and industrial applications due to its stability in the extreme conditions, including but not limit to pH, high temperature, halides, heavy metals and detergents.

Introduction

As the multicopper-containing enzymes, laccases (benzenediol:oxygen oxidoreductase, EC 1.10.3.2) can catalyze the oxidation process of numerous substrates, including anilines, arylamines, ascorbic acid, phenols, and a few inorganic compounds [1,2]. As members of the multicopper oxidase family, laccases normally incorporate four copper atoms (a type I copper, a type II copper, and two type III copper sites [3]. They become promising biocatalysts for biobleaching, biosensors, textile dye decolorization, xenobiotics bioremediation, etc. in biotechnological and industrial applications due to their environmental friendliness and wide substrate spectrum [4].

Laccases are extensively existed in higher plants, insects, and microorganisms [5]. So far, almost all reported laccases are from fungi, which are the only laccases applied in the industries [2]. Nevertheless, lots of time is needed for most fungi to grow and thereafter produce laccases. Additionally, they become unstable under conditions of high temperatures, alkalinity stress, and high salt [6], leading to low efficiency and cost-prohibitive industrial processes [7]. In contrast, bacterial laccases are less frequently studied due to their lower redox potential than that of fungal laccases. But they demonstrated many advantages, including better stability under an extensive range of pH or high temperatures, less susceptible to inhibitory agents, and less dependent on metal ions [8]. Furthermore, bacterial laccases are facile to be heterologously expressed in Escherichia coli. In comparison to their fungal counterparts, it is easier to improve their catalytic properties, stability and expression level via directed evolution [9]. The first prokaryotic laccase was isolated from Azospirillum lipoferum [10], and then numerous laccases were gradually found in Pseudomonas sp. [11], E. coli [12], Streptomyces sp. [13], and Bacillus sp. [14]. As the most famous bacterial laccase yet, the spore coat protein A (CotA) of B. subtilis is the component of endospore coat and is of great help for Bacillus sp. to survive under harsh conditions [15]. Compared to other bacterial laccases, CotA was extensively studied by many researchers due to its excellent alkali-resistance and thermostability [9,[16], [17], [18]], demonstrating its great potential for industrial application. Up to now, the scientific teams have found and characterized various laccases in Bacillus species, including B. halodurans, B. amyloliquefaciens, B. licheniformis, B. pumilus, B. subtilis, B. thuringiensis, B. vallismortis, and Bacillus sp. [14]. However, little is known about the laccases derived from the other spore-forming Bacillus species.

Therefore, it is necessary to screen and identify new bacterial laccases with different catalytic properties to enlarge our knowledge on bacterial laccases and expand the available biocatalysts toolbox for the potential industrial applications. The aim of this work was to screen and characterize a new strain with laccase activity and heterologously express the corresponding gene in E. coli to characterize its biochemical and catalytic properties and thus analyze its ability in decolorizing synthetic dyes. This report would deepen our understanding of Bacillus laccases and facilitate their applications in biotechnology.

Section snippets

Chemicals

2,6-Dimethoxyphenol (2,6-DMP), 2,2′-azino-bis(3-ethylbenzothiazoline-6-sulfonate) (ABTS), azophloxine, congo red, adizol black B, reactive blue 5, reactive blue 19, remazol brilliant blue R, crystal violet, malachile green, and indigo carmine were ordered from Sigma-Aldrich (St. Louis, MO, USA). For molecular operation, the Bacteria DNA Extraction Kit, Gel Extraction and Purification Kit, Plasmid Mini Kit, Pyrobest DNA Polymerase, T4 DNA ligase, and restriction enzymes, and pMD18-T vector

Screening and characterization of strain

One positive isolate with laccase activity was selected for identification and the following investigation. It was a Gram-positive, forming spores, and rod-shaped bacterium with rough surface (data not shown). Its nucleotide sequence of 16S rDNA was amplified using PCR and sequenced. The BLAST search results demonstrated that it exhibited the highest similarity (>99%) with B. amyloliquefaciens. The phylogenetic tree was thereafter engineered based on the 16S rDNA sequences of the isolated

Conclusions

In this study, rLAC could work in the existence of relatively high concentration of NaCl and most metal ions, and demonstrated a better thermostability and a wider pH stable range. Thus it could efficiently decolorize azo, anthraquinonic, and triphenylmethane dyes together with different mediators under acidic conditions to alkaline conditions. As a promising biocatalyst, these properties indicated its potential in plentiful industrial and biotechnological processes.

Author statement

Participated in research conception and design: Fuping Lu and Yihan Liu.

Conducted experiments: Hongbin Wang, Lin Huang, Yanzhen Li, Jieying Ma and Shuang Wang.

Performed data analysis: Hongbin Wang, Yuanfu Zhang, Xiuqi Ge and Nan Wang.

Wrote manuscript: Hongbin Wang and Yihan Liu.

Acknowledgements

This work was supported by the National Key R&D Program of China (2017YFD0201405-04), the Tianjin Correspondent Program of Science and Technology of China (19JCTPJC52200), the National Natural Science Foundation of China (31871740), the China Postdoctoral Science Foundation (2018M641660), and the Tianjin Natural Science Fund (17JCYBJC23700).

Declaration of competing interest

There are no conflicts to declare.

References (58)

  • N. Lončar et al.

    Bacillus amyloliquefaciens laccase — from soil bacteria to recombinant enzyme for wastewater decolorization

    Bioresour. Technol.

    (2013)
  • R. Das et al.

    Spore cells from BPA degrading bacteria, Bacillus sp. GZB displaying high laccase activity and stability for BPA degradation

    Sci. Total Environ.

    (2018)
  • F. Xu

    Effects of redox potential and hydroxide inhibition on the pH activity profile of fungal laccases

    J. Biol. Chem.

    (1997)
  • H. Forootanfar et al.

    Purification and biochemical characterization of extracellular laccase from the ascomycete Paraconiothyrium variabile

    Bioresour. Technol.

    (2011)
  • V.M. Halaburgi et al.

    Purification and characterization of a thermostable laccase from the ascomycetes Cladosporium cladosporioides and its applications

    Process Biochem.

    (2011)
  • J. Yang et al.

    A novel laccase from basidiomycete Cerrena sp.: cloning, heterologous expression, and characterization

    Int. J. Biol. Macromol.

    (2015)
  • N. Lončar et al.

    Expression and characterization of a thermostable organic solvent-tolerant laccase from Bacillus licheniformis ATCC 9945a

    J. Mol. Catal. B-Enzym.

    (2016)
  • A.A. Telke et al.

    Biochemical characteristics of a textile dye degrading extracellular laccase from a Bacillus sp. ADR

    Bioresour. Technol.

    (2011)
  • F.J. Enguita et al.

    Crystal structure of a bacterial endospore coat component. A laccase with enhanced thermostability properties

    J. Biol. Chem.

    (2003)
  • Q. Luo et al.

    Functional expression enhancement of Bacillus pumilus CotA-laccase mutant WLF through site-directed mutagenesis

    Enzyme Microb. Tech.

    (2018)
  • N. Jimenez-Juarez et al.

    Alkali and halide-resistant catalysis by the multipotent oxidase from Marinomonas mediterranea

    J. Biotechnol.

    (2005)
  • C. Vaz-Dominguez et al.

    Laccase electrode for direct electrocatalytic reduction of O2 to H2O with high operational stability and resistance to chloride inhibition

    Biosens. Bioelectron.

    (2008)
  • C. Johannes et al.

    Laccase activity tests and laccase inhibitors

    J. Biotechnol.

    (2000)
  • Y.H. Liu et al.

    Biochemical characterization of a novel GH43 family β-xylosidase from Bacillus pumilus

    Food Chem.

    (2019)
  • C.S.D. Rodrigues et al.

    Treatment of textile effluent by chemical (Fenton’s Reagent) and biological (sequencing batch reactor) oxidation

    J. Hazard. Mater.

    (2009)
  • C. Zhang et al.

    Degradation of triphenylmethane dyes using a temperature and pH stable spore laccase from a novel strain of Bacillus vallismortis

    J. Bioresource Technol.

    (2012)
  • P. Giardina et al.

    Laccases: a never-ending story

    Cell. Mol. Life Sci.

    (2009)
  • G. Singh et al.

    Laccase from prokaryotes: a new source for an old enzyme

    Rev. Environ. Sci. Bio.

    (2011)
  • S. Sonica et al.

    Purification and characterization of an extracellular, thermo-alkali-stable, metal tolerant laccase from Bacillus tequilensis SN4

    PLoS One

    (2014)
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