A feedback loop involving FREP and NF-κB regulates the immune response of sea cucumber Apostichopus japonicus

https://doi.org/10.1016/j.ijbiomac.2019.05.133Get rights and content

Abstract

Our previous work indicated that fibrinogen-related protein (AjFREP) from sea cucumber (Apostichopus japonicus) plays important roles in innate immunity. To understand AjFREP expression regulation in A. japonicus, we cloned the AjFREP promoter and characterized the putative transcription-factor binding motifs. The AjFREP promoter region spans 1365 bp, containing several transcription-factor binding sites. The full-length sequence and all truncated fragments exhibited high promoter activity in HEK-293 cells. Luciferase activity significantly increased for P1(−1365/+16) after LPS exposure, suggesting that the promoter responded to LPS. We also found that two potential NF-κB binding sites were involved in the promoter region, and co-transfection assay demonstrated that the first binding site was necessary for AjFREP transcription. The expression of AjNF-κB/Rel after AjFREP knock-down followed by LPS injection in vivo was further investigated. We found that AjNF-κB/Rel transcript significantly decreased after silencing AjFREP with LPS challenge compared with the control at 4 and 8 h, suggesting that activated AjFREP in turn affected the NF-κB pathway under immune responses. These results provided novel insights into the activation mechanism of AjFREP, i.e., that selectively changing AjFREP expression may prevent pathogen infection in A. japonicus.

Introduction

Fibrinogen-related protein (FREP) acts as a pattern-recognition receptor (PRR) in vertebrates and invertebrates and contains a fibrinogen-like (FBG) domain in the carton terminal [1,2]. FREP reportedly exists in an extensive phylogenetic spectrum and plays crucial roles in defense processes in animals, such as antibacterial immunity, parasite defense, and agglutination. In Marsupenaeus japonicus (echinodermata), MjFREP2 can enhance the phagocytosis of hemocytes, which further promotes bacterial clearance [3]. Moreover, a FReD identified in bay scallop Argopecten irradians can agglutinate Gram-negative and -positive bacteria, chicken, and human erythrocytes [4]. The FREP 2 gene in snail Biomphalaria glabrata plays an important role in parasite defense and is also highly induced by LPS challenge [5]. Tenascin C, a member of the FREP family, is involved in inflammation in mice with LPS stimulation [6]. Unfortunately, the detailed activate mechanisms of FREP genes in vertebrates are poorly understood and unraveling the transcriptional regulation of these molecules may provide new ideas about immune defense and the control of disease outbreaks.

In the past decades, cloned FREP promoters reveal high homologies to binding with a mass of transcription factors, including NF-κB, CREB, C/EBP, and Oct-1 [[7], [8], [9]]. The NF-κB (nuclear factor-κB) family contains five sub-type proteins, namely, NF-κB1, NF-κB2, RelA, RelB, and C-Rel, that interact with each other to generate divergent transcriptionally activities among homo or heterodimeric complexes to regulate a wide array of genes involved in inflammatory responses, cell proliferation, and survival [10,11]. The Rel homology domain (RHD) in the NF-κB complex has approximately 300 amino acid residues, which are required for dimerization, DNA binding, inhibitor (IkB) binding, and nuclear localization [[12], [13], [14]]. Most studies revealed that NF-κB acts as a transcription factor and actively promotes the regions of various genes. For example, Vereshchagina et al. reported that NF-κB enhances the expression of the human complement receptor 2 gene [15]. Moreover, induced complement genes activate the NF-κB pathway and further induce inflammatory factors [16,17].

To date, increasing evidence has indicated that FREPs play key roles in innate immunity, especially in pathogen recognition and phagocytosis [[18], [19], [20]]. However, studies on the molecular transcription regulation of the FREP promoter in invertebrates, particularly in marine invertebrates, are few. The Apostichopus japonicus (e.g., Echinodermata and Holothuroidea) acts as an invertebrate species and turns into important aquaculture animals in China [21,22]. Regrettably, the rapid expansion and intensification of A. japonicus cultivation have led to infectious disease outbreaks and the devastating decline of production [23,24], such as skin ulceration syndrome and the highest infection and mortality rates in sea cucumber farming [25]. The amplification of the AjFREP promoter sequence and the preliminary analysis of its function would contribute to the understanding of the gene expression pattern and might provide more information to fight against bacterial pathogens. In this study, we cloned the promoter region of AjFREP and investigated its promoter activity. Furthermore, we analyzed the potential NF-κB binding sites for AjFREP transcription and the level of NF-κB/Rel transcripts in A. japonicus after AjFREP interference followed by LPS challenge. This work provides useful information about the activated mechanisms of AjFREP and might offer effective disease control strategies.

Section snippets

Experimental samples

Healthy A. japonicus (weight 115 ± 13 g) was obtained from Shandong Anyuan Aquaculture Co. Ltd. (Yantai, China) in March 2018. The sea cucumber was temporarily reared in aerated seawater (temperature of 16 ± 1 °C, and salinity of 28 ± 2) for three days before formal experiments.

Clone of the proximate promoter region of AjFREP gene

Genomic DNA was extracted from the coelomocytes of A. japonicus using the DNA kit for Marine Animals (Beijing, China). The promoter region of AjFREP was obtained using a Genome Walker Kit (Clontech, USA) following the

Analysis the promoter region of AjFREP

The FREP is a pivotal PRR in the innate immune system that has phagocytosis activities and bacterial clearance capacities. To uncover the transcriptional regulation mechanism of AjFREP, we amplified the 5′ flanking region of the gene using the genome walking method (Fig. 1). The translation start site (TSS) was predicted based on the upstream area of the signal peptide, and the Kozak sequences around the methionines were conserved [28]. Upstream of it was the 5′ UTR, and the TSS was predicted

Conclusion

AjFREP, as an important PRR, has phagocytosis activities and bacterial clearance capacities in the innate immune system. We cloned for the first time a fragment of AjFREP promoter, which possessed high promoter activity, and the transcription using NF-κB. The transcriptional AjFREP in turn affected the NF-κB pathway. These findings offered novel insights into the activation mechanism of AjFREP and the NF-κB pathway in the innate immunity.

Acknowledgments

This work was financially supported by the National Natural Science Foundation of China (31802331), Natural Science Foundation of Ningbo (2018A610340), Fund from Ningbo University for Yina Shao (XYL18030), and the K.C. Wong Magna Fund in Ningbo University.

References (51)

  • M.A. Gordy et al.

    The role of fibrinogen-related proteins in the gastropod immune response

    Fish Shellfish Immunol

    (2015)
  • Z. An et al.

    Temperature effects on growth-ration relationships of juvenile sea cucumber Apostichopus japonicus (Selenka)

    Aquaculture

    (2007)
  • H. Deng et al.

    Isolation and pathogenicity of pathogens from skin ulceration disease and viscera ejection syndrome of the sea cucumber Apostichopus japonicus

    Aquaculture

    (2009)
  • P. Zhang et al.

    Proteomic identification of differentially expressed proteins in sea cucumber Apostichopus japonicus coelomocytes after Vibrio splendidus infection

    Dev. Comp. Immunol.

    (2014)
  • H. Liu et al.

    Identification of the pathogens associated with skin ulceration and peristome tumescence in cultured sea cucumbers Apostichopus japonicus (Selenka)

    J. Invertebr. Pathol.

    (2010)
  • L.T. Jiang et al.

    Identification and characterization of a novel PRR of fibrinogen-related protein in Apostichopus japonicus

    Fish Shellfish Immunol

    (2018)
  • K.J. Livak et al.

    Analysis of relative gene expression data using realtime quantitative PCR and the 2−ΔΔCTmethod

    Methods

    (2001)
  • P. Thomas et al.

    HEK293 cell line: a vehicle for the expression of recombinant proteins

    J. Pharmacol. Toxicol.

    (2005)
  • L. Zhao et al.

    The first cloned sea cucumber FADD from Holothuria leucospilota: molecular characterization, inducible expression and involvement of apoptosis

    Fish Shellfish Immunol

    (2019)
  • W.J. Liu et al.

    The promoter of the white spot syndrome virus immediate-early gene WSSV108 is activated by the cellular KLF transcription factor

    Dev. Comp. Immunol.

    (2015)
  • X.W. Wang et al.

    Pattern recognition receptors acting in innate immune system of shrimp against pathogen infections

    Fish Shellfish Immunol

    (2013)
  • P. Zhang et al.

    Identification and characterization of miR-92a and its targets modulating Vibrio splendidus challenged Apostichopus japonicus

    Fish Shellfish Immunol

    (2014)
  • Y. Chai et al.

    The molecular cloning and characteristics of a fibrinogen-related protein (TfFREP1) gene from roughskin sculpin (Trachidermus fasciatus)

    Fish Shellfish Immun

    (2012)
  • S. Akira et al.

    NF-IL6 and NF-κB in cytokine gene regulation

    Adv. Immunol.

    (1997)
  • X. Wei et al.

    Role of scavenger receptor from Octopus ocellatus as a co-receptor of Toll-like receptor in initiation of TLR-NF-κB signaling during anti-bacterial response

    Dev. Comp. Immunol.

    (2018)
  • Cited by (5)

    • The ARM repeat domain of hemocyanin interacts with MKK4 to modulate antimicrobial peptides expression

      2022, iScience
      Citation Excerpt :

      Thus, most invertebrates encode immune-related proteins (Aweya et al., 2021), including immunoglobulin-like molecules, that enable them mount direct or indirect immune responses by interacting with other proteins/factors via coordinated immune pathways (Halaby and Mornon, 1998). For instance, the fibrinogen-related protein (FREPs) that comprises a C-terminal fibrinogen (FBG) domain and upstream immunoglobulin domains (Adema, 2015) plays important innate immune functions in bay scallop Argopecten irradians (Zhang et al., 2009a), mosquito Anopheles gambiae (Dong and Dimopoulos, 2009), and sea cucumber Apostichopus japonicus (Jiang et al., 2018) due to the presence of an NF-κB binding motif on FREP promoter region, which can be activated by pathogens (Jiang et al., 2019). Similarly, the Down syndrome cell adhesion molecule (Dscam), which consists of more than 18,000 isoforms of the Ig-superfamily receptors (Watson et al., 2005), binds to pathogenic bacteria and regulates AMPs expression in Eriocheir sinensis (Li et al., 2019b).

    • Transcription factor pparαb activates fads2s to promote LC-PUFA biosynthesis in the golden pompano Trachinotus ovatus (Linnaeus 1758)

      2020, International Journal of Biological Macromolecules
      Citation Excerpt :

      Hence, no associativity was discovered between fatty acid composition and the expression of the two Tofads2s in the present nutritional experiment. Generally, transcription factors binding to particular sequences in the promoter of target genes were able to alter the transcription of genes in eukaryotic cells [60,61]. The PPARα dominated lipid metabolism in mammals and affected fads expression in avian and fish species [21,27,28,62].

    View full text