Review
Gene-to-screen
Targeting amino acid metabolism for cancer therapy

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Highlights

To support sustained biomass accumulation, tumor cells undergo metabolic reprogramming. Nutrient transporters and metabolic enzymes are regulated by the same oncogenic signals that drive cell-cycle progression. Some of the earliest cancer therapies used antimetabolites to disrupt tumor metabolism, and there is now renewed interest in developing drugs that target metabolic dependencies. Many cancers exhibit increased demand for specific amino acids, and become dependent on either an exogenous supply or upregulated de novo synthesis. Strategies to exploit such ‘metabolic addictions’ include depleting amino acids in blood serum, blocking uptake by transporters and inhibiting biosynthetic or catabolic enzymes. Recent findings highlight the importance of using appropriate model systems and identifying target patient groups as potential therapies advance into the clinic.

Introduction

The metabolic requirements of proliferating cells, including cancer cells, differ from those of quiescent cells. Proliferating cells must acquire and process metabolites to fulfill the biosynthetic demands of replication, while maintaining energy and redox homeostasis. This presents particular challenges within the tumor microenvironment, which is often poorly vascularized and depleted of nutrients including molecular oxygen. Consequently, cancer cells utilize a broad range of strategies to obtain metabolic fuels, such that ‘use of opportunistic modes of nutrient acquisition’ was recently described as a hallmark of cancer metabolism [1].

A seminal discovery in the field of cancer metabolism was made in the 1920s by Otto Warburg, who observed that tumor tissues consume glucose much more rapidly than surrounding healthy tissue, and ferment glucose to lactate regardless of oxygen availability (aerobic glycolysis or the Warburg effect) [2]. Subsequently, Harry Eagle noted that optimal proliferation of certain cultured mammalian cell lines requires a several-fold molar excess of glutamine over any other amino acid [3]. Indeed, glucose and then glutamine are the most rapidly consumed nutrients by many cultured cancer cell lines 4, 5, although altered metabolism of fatty acids, acetate, nucleotides, folate, proteins and several amino acids besides glutamine has also been reported [1].

Cancer cell metabolism has been targeted by drugs since the advent of modern chemotherapy. In the late 1940s, the antifolate aminopterin was used to induce remission in pediatric acute lymphoblastic leukemia (ALL) patients. Aminopterin, supplanted in the 1950s by the related drug methotrexate, competitively inhibits dihydrofolate reductase and thereby blocks recycling of tetrahydrofolate, a carrier of ‘one-carbon units’ that has essential roles in amino acid and nucleic acid metabolism [6]. Today antifolates, along with antipyrimidines and antipurines, are routinely used to treat a range of cancers, illustrating the feasibility of targeting metabolism for cancer therapy.

Section snippets

Cancer cell amino acid metabolism

The 20 standard proteinogenic amino acids contribute to a diverse array of processes important for cell proliferation, including biosynthesis of proteins, nucleotides, lipids, glutathione, glucosamine and polyamines, and also replenishment (anaplerosis) of tricarboxylic acid (TCA) cycle carbon. Concentrations of amino acids in blood serum and selected tissues are listed in Table S1 (see supplementary material online). Cellular amino acid metabolism is highly flexible, and varies remarkably with

Depletion of serum amino acids

Currently, the only anticancer agents that directly target amino acid metabolism are bacterial l-asparaginases (from Escherichia coli and Erwinia chrysanthemi), which are FDA-approved for treatment of pediatric and adult ALL. A potential complication of using bacterial enzymes is the production of neutralizing antibodies during treatment. PEGylation decreases immunogenicity and prolongs half-life, and PEGylated E. coli l-asparaginase is also FDA-approved for ALL therapy. Numerous clinical

Nitrogen transfer reactions: glutamine and its metabolic neighbors

After glucose, the most rapidly consumed nutrient by many cultured cancer cell lines is glutamine 4, 5, the most abundant amino acid in blood serum [7]. Although other amino acids, which are consumed at much lower rates than glutamine, collectively account for the majority of carbon mass in proliferating mammalian cells, glucose- and glutamine-derived carbon each still constitute 5–10% of total dry cell mass [5]. Glutamine is a major carbon source for nonessential amino acid synthesis (Fig. 2),

Serine/glycine and one-carbon metabolism

Altered serine metabolism in tumors was noted nearly half a century ago, and elevated flux through the de novo serine synthesis pathway (SSP) is a common phenomenon in cancer cells [43]. The SSP branches from glycolysis at the point of 3-phosphoglycerate and involves three sequential reactions, catalyzed by 3-phosphoglycerate dehydrogenase (PHGDH), phosphoserine aminotransferase (PSAT)1 and phosphoserine phosphatase (PSPH) (Fig. 3a). Even though up to 10% of glycolytic carbon can be diverted

Other potential targets

One of the most overexpressed metabolic genes in human tumors is PYCR1, which encodes pyrroline-5-carboxylate reductase 1, a mitochondrial enzyme in the pathway that synthesizes proline from glutamate (Fig. 2) [46]. PYCR1 was identified as one of 16 essential metabolic genes in a breast cancer xenograft model [49], and its expression is upregulated by the oncogenic transcription factor c-Myc, which simultaneously downregulates enzymes that catalyze proline catabolism [52]. A recent study using

Concluding remarks

The past decade has seen rapid advances in our understanding of the metabolic reprogramming that occurs during tumorigenesis. Strategies to target specific nodes of cancer cell amino acid metabolism have progressed from preclinical studies to clinical trials, and are showing efficacy in some contexts. To date, research in this field has relied heavily on cancer cell lines grown in standard culture media. However, recent work reveals that remarkable metabolic adaptations can take place when

Conflicts of interest

The authors have no conflicts of interest to declare.

Acknowledgments

We thank Cindy Westmiller for assistance with manuscript preparation.

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