Genetic dissection of immunity in leprosy

https://doi.org/10.1016/j.coi.2004.11.006Get rights and content

Leprosy is a chronic infectious disease caused by Mycobacterium leprae that affects an estimated 700 000 new individuals each year. A strong contribution of host genetics to susceptibility to leprosy has long been suggested to account for the considerable variability observed between individuals exposed to M. leprae. As there is no relevant animal model for human leprosy, forward genetics is the main strategy used to identify the genes and, consequently, the immunological pathways involved in protective immunity to M. leprae. With respect to genome-wide screens, a major breakthrough has been reported this year; variants in the regulatory region shared by PARK2 and PACRG have been identified as being common risk factors for leprosy.

Introduction

Leprosy is a chronic infectious disease caused by Mycobacterium leprae, an obligate intracellular pathogen that principally infects macrophages and Schwann cells [1]. Damage to skin and peripheral nerves results in the characteristic deformities and disabilities that contribute to the intense social stigma and discrimination of patients and their families. As leprosy afflicts individuals in their most productive stage of life, it imposes a significant economic burden on the community. Fortunately, the clinical efficacy of multi-drug therapy (MDT) led the World Health Organization to declare in 1991 that leprosy would be eliminated by 2000, with a prevalence of less than 1 case per 10 000 individuals. Of the 122 countries in which leprosy was considered endemic in 1985, 112 had successfully eliminated it by 2003 and more than 13 million patients have been cured by MDT in the past 20 years (WHO leprosy elimination project [status report 2003]; URL: http://www.who.int/lep/Reports/s20042.pdf). Despite this impressive decline in prevalence, the incidence of leprosy has remained unchanged over the past 15 years, with approximately 700 000 new cases per year. Unexpectedly, incidence approximates prevalence, a striking observation in the context of a chronic disease. Although this could partly reflect improved leprosy control and case detection in endemic countries [2], it is also plausible that the global use of MDT has had limited impact on the transmission cycle of M. leprae. It is unclear why the incidence of leprosy is still so high despite effective chemotherapy and the fact that humans are the only relevant reservoir of M. leprae. Thus, important aspects of the intricate relationship between the pathogen and its human host remain to be discovered.

Although leprous nodules were found to contain brown bodies in 1847 [3], these bodies were mistaken for degenerated fat cells until 1873 when Armauer Hansen re-examined the nodules and recognized that they contained bacilli [4]. However, the proof of an infectious agent was difficult to obtain until evidence of direct transmission was shown in 1886 [5]. First named Bacillus leprae [6], the causative agent was assigned to the genus Mycobacterium by Lehmann and Neumann in 1896 [7]. The inability to cultivate M. leprae in vitro and the lack of a suitable animal model have long hampered leprosy research. Progress was made by Charles Shepard in 1960 with the observation of limited M. leprae multiplication after injection into mouse footpads [8], and by Kircheimer and Stoors in 1971 with the demonstration that the nine-banded armadillo is a natural host for systemic infection [9]. More recently, the complete sequencing of the M. leprae genome was an important landmark in the field [10]. When compared to M. tuberculosis, a strong gene decay is observed in M. leprae, resulting in the loss of entire metabolic pathways present in M. tuberculosis. This can render the leprosy bacillus dependent on host metabolic products and might explain its long generation time and inability to grow in culture. From a phylogenetic point of view, M. leprae is a distinct species [11]. In particular, it is not a close relative of M. lepraemurium [12], and conclusions concerning leprosy drawn from mouse models of M. lepraemurium infection should be interpreted with great caution. Due to the absence of in vitro human studies and in vivo animal models, it has been difficult to elucidate the immunological basis of leprosy.

Section snippets

Forward genetics of protective immunity to Mycobacterium leprae

Most people do not develop clinically overt leprosy and do not present the disease even after sustained exposure to M. leprae 1.•, 13.. The disease itself presents a wide spectrum of clinical manifestations, ranging from tuberculoid to lepromatous forms [14]. Patients with the tuberculoid form present with paucibacillary (PB) leprosy, characterized by low numbers of well-delineated skin lesions, limited nerve involvement, absence of histologically detectable acid-fast bacilli in skin and

Candidate gene approach: leprosy and Toll-like receptors

Mammalian TLRs form a family of receptors that are stimulated by a broad range of compounds mimicking microbial products. To date, 10 members of the TLR family have been identified in humans [21]. They are single-pass transmembrane proteins with an extracellular leucine-rich repeat domain and an intracellular signalling domain that contains a Toll/IL-1 receptor (TIR) domain, homologous to the cytoplasmic domain of the IL-1 receptor [22]. Upon stimulation, TLRs direct the activation of

Genome screening approach: identification of PARK2 and PACRG

Leprosy is the first common infectious disease for which positional cloning has been successfully used to identify genetic variants that play a major role in disease risk. The first step of the study was a genome-wide linkage analysis performed in 86 Vietnamese families with at least two leprosy-affected siblings displaying approximately equal proportions of PB and MB subtypes [33]. Strong evidence for linkage was observed with chromosome region 6q25. In addition, this genome screen also

Conclusions

Studies in laboratory animals are of considerable value to scientists because they make it possible to test hypotheses experimentally. The past 50 years have seen the development and successful exploitation of mouse models of infection [44]. The unique biology and human tropism of M. leprae implies that forward and reverse genetic approaches in the mouse are of limited relevance to leprosy. Human genetic studies of leprosy have successfully tracked immunity to M. leprae infection to an

References and recommended reading

Papers of particular interest, published within the annual period of review, have been highlighted as:

  • • of special interest

  • •• of outstanding interest

References (49)

  • K.B. Lehmann et al.

    Atlas und Grundriss der Bakteriologie und Lehrbuch der speziellen bakteriologischen Diagnostik

    (1896)
  • C. Shepard

    The experimental disease that follows the injection of human leprosy bacilli into foot pads mice

    J Exp Med

    (1960)
  • W. Kirchheimer et al.

    Attempts to establish the armadillo as a model for the study of leprosy. I. report of lepromatoid leprosy in an experimentally infected armadillo

    Int J Lepr

    (1971)
  • S.T. Cole et al.

    Massive gene decay in the leprosy bacillus

    Nature

    (2001)
  • D. Harmsen et al.

    RIDOM: comprehensive and public sequence database for identification of Mycobacterium species

    BMC Infect Dis

    (2003)
  • J.M. Grange

    Mycobacteria and human disease

    (1996)
  • R.R. Jacobson et al.

    Leprosy

    Lancet

    (1999)
  • C.F. Nathan et al.

    Local and systemic effects of intradermal recombinant interferon-gamma in patients with lepromatous leprosy

    N Engl J Med

    (1986)
  • G. Kaplan et al.

    The reconstitution of cell-mediated immunity in the cutaneous lesions of lepromatous leprosy by recombinant interleukin 2

    J Exp Med

    (1989)
  • J.R. Bleharski et al.

    Use of genetic profiling in leprosy to discriminate clinical forms of the disease

    Science

    (2003)
  • J.L. Casanova et al.

    Genetic dissection of immunity to mycobacteria: the human model

    Annu Rev Immunol

    (2002)
  • L. Abel et al.

    Detection of major genes for susceptibility to leprosy and its subtypes in a Caribbean island: Desirade island

    Am J Hum Genet

    (1988)
  • D. Young

    Prospects for molecular epidemiology of leprosy

    Lepr Rev

    (2003)
  • B. Beutler

    Inferences, questions and possibilities in Toll-like receptor signalling

    Nature

    (2004)
  • Cited by (79)

    • Revisiting the tuberculosis and leprosy cross-immunity hypothesis: Expanding the dialogue between immunology and paleopathology

      2019, International Journal of Paleopathology
      Citation Excerpt :

      Alternatively, studies on ancient M. leprae genomes have shown that the DNA of the leprosy pathogen did not change significantly in medieval Europe and therefore pathogen virulence cannot explain leprosy’s decline (Donoghue et al., 2015; Mendum et al., 2014; Roffey et al., 2017; Schuenemann et al., 2013, 2018; Taylor et al., 2013). In addition, genetic studies in contemporary populations have shown that the immune genetic variance of the host is a key factor in the progress and outcome of leprosy infection, where candidate genes (alleles) such as human leukocyte antigen (HLA) and Toll-like receptors (TLR) show significant correlations with increased susceptibility to leprosy (Alacais et al. (2005); Mira, 2006; Wong et al., 2010). Moreover, a recent study on ancient DNA from skeletal samples from a medieval cemetery in Denmark also demonstrated a significant association between the HLA class II allele DRB1*15:01 and LL (Krause-Kyora et al., 2018).

    • Fine mapping of the GWAS loci identifies SLC35D1 and IL23R as potential risk genes for leprosy

      2016, Journal of Dermatological Science
      Citation Excerpt :

      This result suggested that rare missense variants, rather than regulatory variants in IL23R might affect leprosy. The development and onset of leprosy was affected by host genetic background [3–5]. Based on the available knowledge, we tentatively concluded that leprosy was caused by many genes/loci with trivial effects [33], and there might be no major effect gene affecting onset and clinical presentation of leprosy.

    • Association of TNF-α-<sup>308(GG)</sup>, IL-10<sup>-819(TT)</sup>, IL-10<sup>-1082(GG)</sup> and IL-1R1<sup>+1970(CC)</sup> genotypes with the susceptibility and progression of leprosy in North Indian population

      2015, Cytokine
      Citation Excerpt :

      Furthermore, we studied the expression of 84 genes (including all possible cytokines and regulators) in PBMCs derived from leprosy patients. Significant down regulation of Th1 and Th2 driving genes, and concomitant up regulation of TGF β and IL-10 transcripts in BL/LL patients were the key observation of this study [3,6–9]. Single nucleotide polymorphisms (SNPs) are key factors to regulate the expressional variation of human genes and found to be associated with the susceptibility and progression [10].

    View all citing articles on Scopus
    View full text