Journal of Molecular Biology
Volume 423, Issue 5, 9 November 2012, Pages 800-817
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Membrane Binding and Self-Association of the Epsin N-Terminal Homology Domain

https://doi.org/10.1016/j.jmb.2012.08.010Get rights and content
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Abstract

Epsin possesses a conserved epsin N-terminal homology (ENTH) domain that acts as a phosphatidylinositol 4,5-bisphosphate‐lipid‐targeting and membrane‐curvature‐generating element. Upon binding phosphatidylinositol 4,5‐bisphosphate, the N-terminal helix (H0) of the ENTH domain becomes structured and aids in the aggregation of ENTH domains, which results in extensive membrane remodeling. In this article, atomistic and coarse-grained (CG) molecular dynamics (MD) simulations are used to investigate the structure and the stability of ENTH domain aggregates on lipid bilayers. EPR experiments are also reported for systems composed of different ENTH-bound membrane morphologies, including membrane vesicles as well as preformed membrane tubules. The EPR data are used to help develop a molecular model of ENTH domain aggregates on preformed lipid tubules that are then studied by CG MD simulation. The combined computational and experimental approach suggests that ENTH domains exist predominantly as monomers on vesiculated structures, while ENTH domains self-associate into dimeric structures and even higher‐order oligomers on the membrane tubes. The results emphasize that the arrangement of ENTH domain aggregates depends strongly on whether the local membrane curvature is isotropic or anisotropic. The molecular mechanism of ENTH‐domain-induced membrane vesiculation and tubulation and the implications of the epsin's role in clathrin-mediated endocytosis resulting from the interplay between ENTH domain membrane binding and ENTH domain self-association are also discussed.

Graphical Abstract

Highlights

► ENTH domain plays an essential role in clathrin-mediated endocytosis. ► Membrane binding of ENTH domain is studied by a combined MD and EPR approach. ► A CG ENTH model for CG MD simulations is developed. ► ENTH-bound membrane tubules and vesicles are studied via CG MD simulations. ► The arrangement of ENTH domains highly correlates with local membrane curvature.

Abbreviations

ENTH
epsin N-terminal homology
PIP2
phosphatidylinositol 4,5-bisphosphate
CG
coarse-grained
MD
molecular dynamics
CME
clathrin-mediated endocytosis
N-BAR
N-terminal Bin/Amphiphysin/Rvs-homology
EM
electron microscopy
HAS
hybrid analytical systematic
PMF
potential of mean force
RT
room temperature

Keywords

epsin
ENTH domain
molecular dynamics
membrane remodeling
amphipathic helix binding

Cited by (0)

C.-L.L. and C.C.J. contributed equally to this work.