Abstract
This study aimed to investigate the role of long non-coding RNA (lncRNA) taurine up-regulated 1 (TUG1) in the development of ulcerative colitis (UC) and to explore the underlying mechanisms. A murine model of UC was induced by dextran sodium sulfate (DSS) exposure. The colonic epithelial YAMC cells were treated with TNF-α to simulate the inflammatory environment of intestinal epithelial cells (IECs). RNA pull-down and RIP assays were performed to analyze the interaction between TUG1 and HuR. Luciferase activity assay was conducted to evaluate the interaction between TUG1 and miR-29b-3p. Cell proliferation was evaluated by MTT assay. Cell apoptosis was assessed by flow cytometry and western blot analysis of apoptosis-related proteins. TUG1 overexpression promoted cell proliferation and inhibited cell apoptosis in the TNF-α-stimulated YAMC cells. The mechanistic analysis showed that TUG1 positively regulated the HuR/c-myc axis via its interaction with HuR, leading to upregulation of c-myc expression; meanwhile, TUG1 negatively regulated the miR-29b-3p/CDK2 signaling via binding to miR-29b-3p, leading to derepression of CDK2 expression. Further animal experiments showed that TUG1 overexpression attenuated UC progression in the DSS-induced UC in mice. Collectively, TUG1 inhibits IEC apoptosis and UC progression by regulating the balance of HuR and miR-29b-3p.
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Tatiya-Aphiradee N, Chatuphonprasert W, Jarukamjorn K. Immune response and inflammatory pathway of ulcerative colitis. J Basic Clin Physiol Pharmacol. 2018;30(1):1–10. https://doi.org/10.1515/jbcpp-2018-0036.
Wang C, He L, Zhang J, Ouyang C, Wu X, Lu F, et al. Clinical, laboratory, endoscopical and histological characteristics predict severe ulcerative colitis. Hepatogastroenterology. 2013;60(122):318–23. https://doi.org/10.5754/hge12607.
Abraham C, Cho JH. Inflammatory bowel disease. N Engl J Med. 2009;361(21):2066–78. https://doi.org/10.1056/NEJMra0804647.
Ren MT, Gu ML, Zhou XX, Yu MS, Pan HH, Ji F, et al. Sirtuin 1 alleviates endoplasmic reticulum stress-mediated apoptosis of intestinal epithelial cells in ulcerative colitis. World J Gastroenterol. 2019;25(38):5800–13. https://doi.org/10.3748/wjg.v25.i38.5800.
Wu F, Huang Y, Dong F, Kwon JH. Ulcerative colitis-associated long noncoding RNA, BC012900, regulates intestinal epithelial cell apoptosis. Inflamm Bowel Dis. 2016;22(4):782–95. https://doi.org/10.1097/mib.0000000000000691.
Lv B, Liu Z, Wang S, Liu F, Yang X, Hou J, et al. MiR-29a promotes intestinal epithelial apoptosis in ulcerative colitis by down-regulating Mcl-1. Int J Clin Exp Pathol. 2014;7(12):8542–52.
Andrews C, McLean MH, Durum SK. Cytokine tuning of intestinal epithelial function. Front Immunol. 2018;9:1270. https://doi.org/10.3389/fimmu.2018.01270.
Fujimoto K, Kinoshita M, Tanaka H, Okuzaki D, Shimada Y, Kayama H, et al. Regulation of intestinal homeostasis by the ulcerative colitis-associated gene RNF186. Mucosal Immunol. 2017;10(2):446–59. https://doi.org/10.1038/mi.2016.58.
Xiao L, Wang JY. RNA-binding proteins and microRNAs in gastrointestinal epithelial homeostasis and diseases. Curr Opin Pharmacol. 2014;19:46–53. https://doi.org/10.1016/j.coph.2014.07.006.
Xiao L, Rao JN, Zou T, Liu L, Cao S, Martindale JL, et al. miR-29b represses intestinal mucosal growth by inhibiting translation of cyclin-dependent kinase 2. Mol Biol Cell. 2013;24(19):3038–46. https://doi.org/10.1091/mbc.E13-05-0287.
Chen SW, Wang PY, Liu YC, Sun L, Zhu J, Zuo S, et al. Effect of long noncoding RNA H19 overexpression on intestinal barrier function and its potential role in the pathogenesis of ulcerative colitis. Inflamm Bowel Dis. 2016;22(11):2582–92. https://doi.org/10.1097/mib.0000000000000932.
Ding G, Ming Y, Zhang Y. lncRNA Mirt2 is downregulated in ulcerative colitis and regulates IL-22 expression and apoptosis in colonic epithelial cells. Gastroenterol Res Practice. 2019;2019:8154692. https://doi.org/10.1155/2019/8154692.
Qiao C, Yang L, Wan J, Liu X, Pang C, You W, et al. Long noncoding RNA ANRIL contributes to the development of ulcerative colitis by miR-323b-5p/TLR4/MyD88/NF-κB pathway. Biochem Biophys Res Commun. 2019;508(1):217–24. https://doi.org/10.1016/j.bbrc.2018.11.100.
Zhang L, Cheng H, Yue Y, Li S, Zhang D, He R. TUG1 knockdown ameliorates atherosclerosis via up-regulating the expression of miR-133a target gene FGF1. Cardiovasc Pathol. 2018;33:6–15. https://doi.org/10.1016/j.carpath.2017.11.004.
Lei X, Zhang L, Li Z, Ren J. Astragaloside IV/lncRNA-TUG1/TRAF5 signaling pathway participates in podocyte apoptosis of diabetic nephropathy rats. Drug Des Dev Therapy. 2018;12:2785–93. https://doi.org/10.2147/dddt.s166525.
Tian L, Zhao ZF, Xie L, Zhu JP. Taurine up-regulated 1 accelerates tumorigenesis of colon cancer by regulating miR-26a-5p/MMP14/p38 MAPK/Hsp27 axis in vitro and in vivo. Life Sci. 2019;239:117035. https://doi.org/10.1016/j.lfs.2019.117035.
Carelli S, Giallongo T, Rey F, Latorre E, Bordoni M, Mazzucchelli S, et al. HuR interacts with lincBRN1a and lincBRN1b during neuronal stem cells differentiation. RNA Biol. 2019;16(10):1471–85. https://doi.org/10.1080/15476286.2019.1637698.
Kojima K, Musch MW, Ren H, Boone DL, Hendrickson BA, Ma A, et al. Enteric flora and lymphocyte-derived cytokines determine expression of heat shock proteins in mouse colonic epithelial cells. Gastroenterology. 2003;124(5):1395–407. https://doi.org/10.1016/s0016-5085(03)00215-4.
Wu D, Wu K, Zhu Q, Xiao W, Shan Q, Yan Z et al. Formononetin administration ameliorates dextran sulfate sodium-induced acute colitis by inhibiting NLRP3 Inflammasome Signaling Pathway. 2018:3048532. doi: 10.1155/2018/3048532.
Yue P, Jing L, Zhao X, Zhu H, Teng J. Down-regulation of taurine-up-regulated gene 1 attenuates inflammation by sponging miR-9-5p via targeting NF-κB1/p50 in multiple sclerosis. Life Sci. 2019;233:116731. https://doi.org/10.1016/j.lfs.2019.116731.
Ferrè F, Colantoni A, Helmer-Citterich M. Revealing protein-lncRNA interaction. Brief Bioinform. 2016;17(1):106–16. https://doi.org/10.1093/bib/bbv031.
Kim J, Abdelmohsen K, Yang X, De S, Grammatikakis I, Noh JH, et al. LncRNA OIP5-AS1/cyrano sponges RNA-binding protein HuR. Nucleic Acids Res. 2016;44(5):2378–92. https://doi.org/10.1093/nar/gkw017.
Zhang Z, Hu X, Kuang J, Liao J, Yuan Q. LncRNA DRAIC inhibits proliferation and metastasis of gastric cancer cells through interfering with NFRKB deubiquitination mediated by UCHL5. Cell Mol Biol Lett. 2020;25:29. https://doi.org/10.1186/s11658-020-00221-0.
Li Q, Wang T, Huang S, Zuo Q, Jiang Z, Yang N, et al. LncRNA MALAT1 affects the migration and invasion of trophoblast cells by regulating FOS expression in early-onset preeclampsia. Pregnancy Hypertension. 2020;21:50–7. https://doi.org/10.1016/j.preghy.2020.05.001.
Luo Y, Fang Z, Ling Y, Luo W (2019) LncRNA-H19 acts as a ceRNA to regulate HE4 expression by sponging miR-140 in human umbilical vein endothelial cells under hyperglycemia with or without α-Mangostin. Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie. 118:109256. doi: 10.1016/j.biopha.2019.109256.
Jia Z, Peng J, Yang Z, Chen J, Liu L, Luo D, et al. Long non-coding RNA TP73-AS1 promotes colorectal cancer proliferation by acting as a ceRNA for miR-103 to regulate PTEN expression. Gene. 2019;685:222–9. https://doi.org/10.1016/j.gene.2018.11.072.
Yi L, Ouyang L, Wang S, Li SS, Yang XM. Long noncoding RNA PTPRG-AS1 acts as a microRNA-194-3p sponge to regulate radiosensitivity and metastasis of nasopharyngeal carcinoma cells via PRC1. J Cell Physiol. 2019;234(10):19088–102. https://doi.org/10.1002/jcp.28547.
Lu Y, Tang L, Zhang Z, Li S, Liang S, Ji L et al. (2018) Long Noncoding RNA TUG1/miR-29c Axis Affects Cell Proliferation, Invasion, and Migration in Human Pancreatic Cancer. Dis Markers. 2018:6857042-. doi: 10.1155/2018/6857042.
Lei H, Gao Y, Xu X. LncRNA TUG1 influences papillary thyroid cancer cell proliferation, migration and EMT formation through targeting miR-145. Acta Biochim Biophys Sin. 2017;49(7):588–97. https://doi.org/10.1093/abbs/gmx047.
Han J, Li Y, Zhang B, Liu H, Wu M, Zhang X. lncRNA TUG1 regulates ulcerative colitis through miR-142-5p/SOCS1 axis. Microb Pathog. 2020;143:104139. https://doi.org/10.1016/j.micpath.2020.104139.
Charan J, Kantharia ND. How to calculate sample size in animal studies? Journal Pharmacol Pharmacotherapeutics. 2013;4(4):303–6. https://doi.org/10.4103/0976-500x.119726.
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This study was supported by grants from the National Natural Science Foundation of China (Nos. 81800471, 81974065).
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Supplementary Figure 1. (A) Relative TUG1 expression in YAMC cells transfected with si-NC, si-TUG1-1, si-TUG1-2, and si-TUG1-3 was examined by qRT-PCR analysis. (B) Relative HuR expression in YAMC cells transfected with si-NC, si-HuR-1, si-HuR-2, and si-HuR-3 was examined by qRT-PCR analysis. (C) TUG1 expression in the intestine after injection of LV-TUG1 as compared to LV-Ctrl (n=6 per group). **P<0.01, vs. si-NC or LV-Ctrl. Data represent the mean ± standard deviation from three independent experiments
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Tian, Y., Wang, Y., Li, F. et al. LncRNA TUG1 regulates the balance of HuR and miR-29b-3p and inhibits intestinal epithelial cell apoptosis in a mouse model of ulcerative colitis. Human Cell 34, 37–48 (2021). https://doi.org/10.1007/s13577-020-00428-5
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DOI: https://doi.org/10.1007/s13577-020-00428-5