Abstract
Farnesyl diphosphate synthase (FPPS) is a key isoprenyl diphosphate synthase (IDS), which provides synthetic precursors to the terpenoid metabolic pathway. We isolated and characterized a Pinus massoniana FPPS (PmFPPS) gene which encodes a putative farnesyl diphosphate synthase from P. massoniana Lamb. In silico domain analysis revealed that PmFPPS contained all five conserved IDS domains and was homologous to FPPSs from other plant species. An in vitro enzymatic activity assay resulted in an optimum pH, temperature, and Mg2+ concentration of 7.0–7.5, 25 °C, and 1.2 mM, respectively. To identify the function of PmFPPS in vivo, sense and antisense expression vectors were constructed and transformed into tobacco using a constitutive cauliflower mosaic virus-35S promoter. The overexpression of PmFPPS in transgenic plants had higher squalene contents than the control, and the downregulated transgenic plants had lower squalene contents than the control. These results indicate that PmFPPS performs a regulatory role in triterpene biosynthesis.
Similar content being viewed by others
Abbreviations
- FPP:
-
Farnesyl diphosphate
- FPPS:
-
Farnesyl diphosphate synthase
- IDS:
-
Isoprenyl diphosphate synthase
- MVA:
-
Mevalonic acid
- MEP:
-
C-methyl-d-erythritol alcohol 4-phosphate
- IPP:
-
Isopentenyl pyrophosphate
- DMAPP:
-
Dimethylallyl pyrophosphate phosphoric acid
References
Antonescu C, Antonescu V, Sultana R, Quackenbush J (2010) Using the DFCI gene index databases for biological discovery, Chap. 1: Unit 1. Curr Protoc Bioinform 6:1–36. doi:10.1002/0471250953.bi0106s29
Blanchard L, Karst F (1993) Characterization of a lysine-to-glutamic acid mutation in a conservative sequence of farnesyl diphosphate synthase from Saccharomyces cerevisiae. Gene 125:185–189. doi:10.1007/s00253-012-4370-z
Chang S, Puryear J, Cairney J (1993) A simple and efficient method for isolating RNA from pine trees. Plant Mol Biol Rep 11(2):1993. doi:10.1007/s00709-008-0280-9
Chen A, Kroon PA, Poulter CD (1994) Isoprenyl diphosphate synthases: protein sequence comparisons, a phylogenetic tree, and predictions of secondary structure. Protein Sci 3:600–607. doi:10.1002/pro.5560030408
Chen D, Ye H, Li G (2000) Expression of a chimeric farnesyl diphosphate synthase gene in Artemisia annua L. transgenic plants via Agrobacterium tumefaciens-mediated transformation. Plant Sci 155:179–185. doi:10.1016/S0168-9452(00)00217-X
Closa M, Vranová E, Bortolotti C, Bigler L, Arró M, Ferrer A, Gruissem W (2010) The Arabidopsis thaliana FPP synthase isozymes have overlapping and specific functions in isoprenoid biosynthesis, and complete loss of FPP synthase activity causes early developmental arrest. Plant J 63:512–525. doi:10.1111/j.1365-313X.2010.04253.x
Cornish K (1993) The separate roles of plant cis and trans prenyl transferases in cis-1,4-polyisoprene biosynthesis. Eur J Biochem 218:267–271. doi:10.1007/s11105-009-0145-9
Cunillera N, Arró M, Delourme D, Karst F, Boronat A, Ferrer A (1996) Arabidopsis thaliana contains two differentially expressed farnesyl-diphosphate synthase genes. J Biol Chem 271:7774–7780. doi:10.1074/jbc.271.13.7774
Cunillera N, Boronat A, Ferrer A (1997) The Arabidopsis thaliana FPS1 gene generates a novel mRNA that encodes a mitochondrial farnesyl-diphosphate synthase isoform. J Biol Chem 272:15381–15388. doi:10.1007/s11103-006-6263-y
Daudonnet S, Karst F, Tourte Y (1997) Expression of the farnesyl diphosphate synthase gene of Saccharomyces cerevisiae in tobacco. Mol Breeding 3:137–145
Heazlewood JL et al (2012) Characterization of arabidopsis FPS isozymes and FPS gene expression analysis provide insight into the biosynthesis of isoprenoid precursors in seeds. PLoS ONE 7:e49109. doi:10.1371/journal.pone.0049109
Kim OT et al (2010) Upregulation of phytosterol and triterpene biosynthesis in Centella asiatica hairy roots overexpressed ginseng farnesyl diphosphate synthase. Plant Cell Rep 29:403–411. doi:10.1007/s00299-010-0831-y
Kulkarni R et al (2013) Characterization of three novel isoprenyl diphosphate synthases from the terpenoid rich mango fruit. Plant Physiol Biochem 71:121–131. doi:10.1016/j.plaphy.2013.07.006
Liao ZH et al (2006) A new farnesyl diphosphate synthase gene from Taxus media Rehder: cloning, characterization and functional complementation. J Integr Plant Biol 48:692–699. doi:10.1111/j.1744-7909.2006.00243.x
Manzano D, Fernández-Busquets X, Schaller H, González V, Boronat A, Arró M, Ferrer A (2004) The metabolic imbalance underlying lesion formation in Arabidopsis thaliana overexpressing farnesyl diphosphate synthase (isoform 1S) leads to oxidative stress and is triggered by the developmental decline of endogenous HMGR activity. Planta 219:982–992
Masferrer A et al (2002) Overexpression of Arabidopsis thaliana farnesyl diphosphate synthase (FPS1S) in transgenic Arabidopsis induces a cell death/senescence-like response and reduced cytokinin levels. Plant J 30:123–132. doi:10.1046/j.1365-313X.2002.01273.x
McGarvey DJ, Croteau R (1995) Terpenoid metabolism. Plant Cell 7:1015–1026. doi:10.1105/tpc.7.7.1015
Montalvetti A, Fernandez A, Sanders JM, Ghosh S, Van Brussel E, Oldfield E, Docampo R (2003) Farnesyl pyrophosphate synthase is an essential enzyme in Trypanosoma brucei. In vitro RNA interference and in vivo inhibition studies. Biol Chem 278:17075–17083. doi:10.1074/jbc.M210467200M210467200
Murray MG, Thompson WF (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res 8:4321–4325. doi:10.1007/s10265-006-0059-7
Nagel R, Gershenzon J, Schmidt A (2012) Nonradioactive assay for detecting isoprenyl diphosphate synthase activity in crude plant extracts using liquid chromatography coupled with tandem mass spectrometry. Anal Biochem 422:33–38. doi:10.1016/j.ab.2011.12.037
Ohnuma S, Hirooka K, Hemmi H, Ishida C, Ohto C, Nishino T (1996) Conversion of product specificity of archaebacterial geranylgeranyl-diphosphate synthase. Identification of essential amino acid residues for chain length determination of prenyltransferase reaction. J Biol Chem 271:18831–18837. doi:10.1074/jbc.271.31.18831
Pichersky E, Gershenzon J (2002) The formation and function of plant volatiles: perfumes for pollinator attraction and defense. Curr Opin Plant Biol 5:237–243. doi:10.1016/S1369-5266(02)00251-0
Richter A, Seidl-Adams I, Köllner TG, Schaff C, Tumlinson JH, Degenhardt J (2015) A small, differentially regulated family of farnesyl diphosphate synthases in maize (Zea mays) provides farnesyl diphosphate for the biosynthesis of herbivore-induced sesquiterpenes. Planta 241:1351–1361. doi:10.1007/s00425-015-2254-z
Schmidt A, Gershenzon J (2007) Cloning and characterization of isoprenyl diphosphate synthases with farnesyl diphosphate and geranylgeranyl diphosphate synthase activity from Norway spruce (Picea abies) and their relation to induced oleoresin formation. Phytochemistry 68:2649–2659. doi:10.1016/j.phytochem.2007.05.037
Sheares BT et al (1989) Cloning, analysis, and bacterial expression of human farnesyl pyrophosphate synthetase and its regulation in Hep G2 cells. Biochemistry 28:8129–8135
Song L, Poulter CD (1994) Yeast farnesyl-diphosphate synthase: site-directed mutagenesis of residues in highly conserved prenyltransferase domains I and II. Proc Natl Acad Sci 91:3044–3048. doi:10.1007/BFb0102064
Sun Y, Long R, Kang J, Zhang T, Zhang Z, Zhou H, Yang Q (2012) Molecular cloning and characterization of three isoprenyl diphosphate synthase genes from alfalfa. Mol Biol Rep 40:2035–2044. doi:10.1007/s11033-012-2262-z
Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30:2725–2729. doi:10.1093/molbev/mst197
Tarshis LC, Yan M, Poulter CD, Sacchettini JC (1994) Crystal structure of recombinant farnesyl diphosphate synthase at 2.6-A resolution. Biochemistry 33:10871–10877
Tholl D, Croteau R, Gershenzon J (2001) Partial purification and characterization of the short-chain prenyltransferases, gernayl diphospate synthase and farnesyl diphosphate synthase, from Abies grandis (grand fir). Arch Biochem Biophys 386:233–242. doi:10.1006/abbi.2000.2212
Wang P et al (2004) Cloning and functional analysis of a cDNA encoding Ginkgo biloba farnesyl diphosphate synthase. Mol Cells 18:150–156. doi:10.1007/s00253-016-7626-1
Yatagai M, Hong Y (1997) Chemical composition of the essential oil of Pinus massoniana Lamb. J Essent Oil Res 9:485–487. doi:10.1080/10412905.1997.9700759
Acknowledgments
We are grateful to Prof. Zhangqi Yang from Institute of Guangxi Academy of Forestry Sciences for provided the P. massoniana needles. Authors Qi QI and Ran LI are equal contribution to this work.
Funding
This work was financially supported by the Beijing Higher Education Young Elite Teacher Project (YETP0755), High Technology Research and Development 863 Program (2011AA100203) and grants ITR 13047.
Author information
Authors and Affiliations
Corresponding authors
Ethics declarations
Conflict of interest
We declare that no conflict of interest exits in the submission of this manuscript.
Additional information
Qi Qi and Ran Li are equal contribution to this work.
Rights and permissions
About this article
Cite this article
Qi, Q., Li, R., Gai, Y. et al. Cloning and functional identification of farnesyl diphosphate synthase from Pinus massoniana Lamb. J. Plant Biochem. Biotechnol. 26, 132–140 (2017). https://doi.org/10.1007/s13562-016-0373-7
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s13562-016-0373-7