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Endophytic fungi diversity of aquatic/riparian plants and their antifungal activity in vitro

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Abstract

Two hundred and fourteen endophytic fungi were isolated from 500 segments of aquatic/riparian plants Ottelia acuminata, Myriophyllum verticillatum, Equisetum arvense, Cardamine multijuga, and Impatiens chinensis. They were identified to 31 taxa in which Cladosporium, Fusarium, and Geotrichum were the dominant genera. Among all isolates, 169 (79%) were anamorphic fungi, 1 (0.5%) was an teleomorphic ascomycete and 44 (21%) were sterile mycelia. There were significant differences in the colonization frequency of endophytes between the five plant species (X∼2=51.128, P<0.001, Chi-square test). The riparian plants harboured more endophytes than the submerged plants. The antifungal activity of these isolates against Fusarium solani and Phytophthora nicotianae in vitro were tested and 28 (13.1%) isolates showed antifungal activities with more than 30% growth inhibition rate against the two pathogens.

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References

  • Alvarez, P.P., C.D. Bishop, and M.J. Pascual-Villalobos. 2001. Antifungal activity of the essential oil of flowerheads of garland chrysanthemum (Chrysanthemum coronarium) against agriculture pathogens. Phytochemistry 57, 99–102.

    Article  Google Scholar 

  • Arnold, A.E. and L.C. Lewis. 2005. Evolution of fungal endophytes and their roles against insects, pp. 74–96. In F. Vegan and M. Blackwell (eds.), Ecological and evolutionary advances in insectfungus associations. Oxford University Press, Oxford, UK.

    Google Scholar 

  • Arnold, A.E. and F. Lutzoni. 2007. Diversity and host range of foliar fungal endophytes: Are tropical leaves biodiversity hotspots? Ecology 88, 541–549.

    Article  PubMed  Google Scholar 

  • Arnold, A.E., Z. Maynard, G.S. Gilbert, P.D. Coley, and T.A. Kursar. 2000. Are tropical fungal endophytes hyperdiverse? Ecol. Lett. 3, 267–274.

    Article  Google Scholar 

  • Arnold, A.E., L.C. Mejía, D. Kyllo, E.I. Rojas, Z. Maynard, N. Robbins, and E.A. Herre. 2003. Fungal endophytes limit pathogen damage in a tropical tree. Proc. Natl. Acad. Sci. USA 100, 15649–15654.

    Article  CAS  PubMed  Google Scholar 

  • Barnett, H.L. and B.B. Hunter. 1987. Illustrated genera of imperfect fungi, pp. 61–196. Macmillan Publishing Company, New York, N.Y., USA.

    Google Scholar 

  • Bridge, P.D. and K.K. Newsham. 2009. Soil fungal community composition at Mars Oasis, a southern maritime Antarctic site, assessed by PCR amplification and cloning. Fungal Ecol. 2, 66–74.

    Article  Google Scholar 

  • Bussaban, B., S. Lumyong, P. Lumyong, E.H. McKenzie, and K.D. Hyde. 2001. Endophytic fungi from Amomum siamense. Can. J. Microbiol. 47, 1–66.

    Article  Google Scholar 

  • Cornick, J., A. Standwertha, and P.J. Fisher. 2005. A preliminary study of fungal endophyte diversity in a stable and declining bed of Spartina anglica Hubbard. Mycologist 19, 24–29.

    Article  Google Scholar 

  • Duong, L.M., R. Jeewon, S. Lumyong, and K.D. Hyde. 2006. DGGE coupled with ribosomal DNA phylogenies reveal uncharacterized fungal phylotypes on living leaves of Magnolia liliifera. Fungal Divers. 23, 121–138.

    Google Scholar 

  • Ellis, M.B. 1988. Dematiaceous hyphomycetes, pp. 40–491. International Mycological Institute, Bakeham Lane, Egham, Surrey TW20 9TY, UK.

    Google Scholar 

  • Fernandes, I., S. Duarte, F. Cássio, and C. Pascoal. 2009. Mixtures of zinc and phosphate affect leaf litter decomposition by aquatic fungi in streams. Sci. Total Environ. 407, 4283–4288.

    Article  CAS  PubMed  Google Scholar 

  • Guimaraes, D.O., W.S. Borges, C.Y. Kawano, P.H. Ribeiro, G.H. Goldman, A. Nomizo, O.H. Thiemann, G. Oliva, N.P. Lopes, and M.T. Pupo. 2008. Biological activities from extracts of endophytic fungi isolated from Viguiera arenaria and Tithonia diversifolia. FEMS Immunol. Med. Microbiol. 52, 134–144.

    Article  CAS  PubMed  Google Scholar 

  • Herre, E.A., L.C. Mejía, D.A. Kyllo, E. Rojas, Z. Maynard, A. Butler, and B.S. Van. 2007. Ecological implications of anti-pathogen effects of tropical fungal endophytes and mycorrhizae. Ecology 88, 550–558.

    Article  PubMed  Google Scholar 

  • Hoffman, M.T. and A.E. Arnold. 2008. Geographic locality and host identity shape fungal endophyte communities in cupressaceous trees. Mycol. Res. 112, 331–344.

    Article  CAS  PubMed  Google Scholar 

  • Hu, H.L., R. Jeewon, D.Q. Zhou, T.X. Zhou, and K.D. Hyde. 2007. Phylogenetic diversity of endophytic Pestalotiopsis species in Pinus armandii and Ribes spp.: evidence from rDNA and β-tubulin gene phylogenies. Fungal Divers. 24, 1–22.

    CAS  Google Scholar 

  • Huang, W.Y., Y.Z. Cai, K.D. Hyde, H. Corke, and M. Sun. 2008. Biodiversity of endophytic fungi associated with 29 traditional Chinese medicinal plants. Fungal Divers. 33, 61–75.

    Google Scholar 

  • Huang, Y.J., J.F. Wang, G.L. Li, Z.H. Zheng, and W.J. Su. 2001. Antitumour and antifungal activities in endophytic fungi isolated from pharmaceutical plants Taxus mairei, Cephalataxus fortune and Torreya grandis. FEMS Immunol. Med. Microbiol. 31, 163–167.

    Article  CAS  PubMed  Google Scholar 

  • Hyde, K.D. and K. Soytong. 2008. The fungal endophyte dilemma. Fungal Divers. 33, 163–173.

    Google Scholar 

  • Kumar, D.S.S., C.S. Lau, J.M.F. Wan, D. Yang, and K.D. Hyde. 2005. Immunomodulatory compounds from Pestalotiopsis leucothës (HKUCC 10197), an endophytic fungus of Tripterygium wilfordii. Life Sci. 78, 147–156.

    Article  CAS  PubMed  Google Scholar 

  • Kumaresan, V. and T.S. Suryanarayanan. 2001. Occurrence and distribution of endophytic fungi in a mangrove community. Mycol. Res. 105, 1388–1391.

    Article  Google Scholar 

  • Li, H.Y., C. Qing, Y.L. Zhang, and Z.W. Zhao. 2005. Screening for endophytic fungi with antitumor and antifungal activities from Chinese medicinal plants. World J. Microbiol. Biotechnol. 21, 1515–1519.

    Article  Google Scholar 

  • Li, W.C., J. Zhou, S.Y. Guo, and L.D. Guo. 2007. Endophytic fungi associated with lichens in Baihua mountain of Beijing, China. Fungal Divers. 25, 69–80.

    Google Scholar 

  • Lin, Z., T. Zhu, Y. Fang, Q. Gu, and W. Zhu. 2008. Polyketides from Penicillium sp. JP-1, an endophytic fungus associated with the mangrove plant Aegiceras corniculatum. Phytochemistry 69, 1273–1278.

    Article  CAS  PubMed  Google Scholar 

  • Maciá-Vicente, J.G., aH.B. Jansson, S.K. Abdullah, E. Descals, J. Salinas, and L.V. Lopez-Llorca. 2008. Fungal root endophytes from natural vegetation in Mediterranean environments with special reference to Fusarium spp. FEMS Microbiol. Ecol. 64, 90–105.

    Article  PubMed  Google Scholar 

  • Miller, S.P. 2000. Arbuscular mycorrhizal colonisation of semi-aquatic grasses along a wide hydrologic gradient. New Phytol. 145, 145–155.

    Article  Google Scholar 

  • Naik, B.S., J. Shashikala, and Y.L. Krishnamurthy. 2009. Study on the diversity of endophytic communities from rice (Oryza sativa L.) and their antagonistic activities in vitro. Microbiol. Res. 164, 290–296.

    Article  CAS  PubMed  Google Scholar 

  • Oses, R., S. Valenzuela, J. Freer, E. Sanfuentes, and J. Rodríguez. 2008. Fungal endophytes in xylem of healthy Chilean trees and their possible role in early wood decay. Fungal Divers. 33, 77–86.

    Google Scholar 

  • Petrini, O., J. Stone, and F.E. Carrol. 1982. Endophytic fungi in evergreen shrubs in Western Oregon: a preliminary study. Can. J. Bot. 60, 789–796.

    Article  Google Scholar 

  • Photita, W., S. Lumyong, P. Lumyong, and K.D. Hyde. 2001. Endophytic fungi of wild banana (Musa acuminata) at Doi Suthep Pui National Park, Tailand. Mycol. Res. 105, 1508–1513.

    Article  Google Scholar 

  • Raghukumar, C. 2008. Marine fungal biotechnology: an ecological perspective. Fungal Divers. 31, 19–35.

    Google Scholar 

  • Rakotoniriana, E.F., F. Munaut, C. Decock, D. Randriamampionona, M. Andriambololoniaina, T. Rakotomalala, E.J. Rakotonirina, C. Rabemanantsoa, K. Cheuk, S.U. Ratsimamanga, J. Mahillon, M. El-Jaziri, J. Quetin-Leclercq, and A.M. Corbisier. 2008. Endophytic fungi from leaves of Centella asiatica: occurrence and potential interactions within leaves. Antonie van Leeuwenhoek 93, 27–36.

    Article  CAS  PubMed  Google Scholar 

  • Redman, R.S., K.B. Sheehan, R.G. Stout, R.J. Rodriguez, and J.M. Henson. 2002. Thermotolerance generated by plant/fungal symbiosis. Science 298, 1581.

    Article  CAS  PubMed  Google Scholar 

  • Robinson, C.H., T.M. Szaro, A.D. Izzo, I.C. Anderson, P.I. Parkin, and T.D. Bruns. 2009. Spatial distribution of fungal communities in a coastal grassland soil. Soil Biol. Biochem. 41, 414–416.

    Article  CAS  Google Scholar 

  • Rodrigues, K.F. 1994. The foliar fungal endophytes of the Amazon palm Euterpe oleraceae. Mycologia 86, 376–385.

    Article  Google Scholar 

  • Rodrigues, K.F. and G.J. Samuels. 1990. Preliminary study of endophytic fungi in tropical palm. Mycol. Res. 94, 827–830.

    Article  Google Scholar 

  • Rudgers, J.A. and A.L. Swafford. 2009. Benefits of a fungal endophyte in Elymus virginicus decline under drought stress. Basic Appl. Ecol. 10, 43–51.

    Article  Google Scholar 

  • Rungjindamai, N., U. Pinruan, R. Choeyklin, T. Hattori, and E.B.G. Jones. 2008. Molecular characterization of basidiomycetous endophytes isolated from leaves, rachis and petioles of the oil palm, Elaeis guineensis, in Thailand. Fungal Divers. 33, 139–162.

    Google Scholar 

  • Sánchez Márquez, S., G.F. Bills, and I. Zabalgogeazcoa. 2008. Diversity and structure of the fungal endophytic assemblages from two sympatric coastal grasses. Fungal Divers. 33, 87–100.

    Google Scholar 

  • Sati, S.G. and M. Belwal. 2005. Aquatic hyphomycetes as endophytes of riparian plant roots. Mycologia 97, 45–49.

    Article  CAS  PubMed  Google Scholar 

  • Šraj, N., P. Pongrac, M. Klemenc, A. Kladnik, M. Regvar, and A. Gaberščik. 2006. Mycorrhizal colonisation in plants from intermittent aquatic habitats. Aquat. Bot. 85, 331–336.

    Article  Google Scholar 

  • Sridhar, K.R. and F. Bärlocher. 1992. Endophytic aquatic hyphomycetes of roots from spruce, birch and maple. Mycol. Res. 96, 305–308.

    Article  Google Scholar 

  • Strobel, G. and B. Daisy. 2003. Bioprospecting for microbial endophytes and their natural products. Microbiol. Mol. Biol. Rev. 67, 491–502.

    Article  CAS  PubMed  Google Scholar 

  • Tao, G., Z.Y. Liu, K.D. Hyde, X.Z. Lui, and Z.N. Yu. 2008. Whole rDNA analysis reveals novel and endophytic fungi in Bletilla ochracea (Orchidaceae). Fungal Divers. 33, 101–122.

    Google Scholar 

  • Taylor, J.E., K.D. Hyde, and E.B. Jones. 1999. Endophytic fungi associated with the temperature palm Trachy carpus fortunei both within and outside of its natural geographic range. New Phytol. 142, 335–346.

    Article  Google Scholar 

  • Tejesvi, M.V., K.R. Kini, H.S. Prakash, V. Subbiah, and H.S. Shetty. 2007. Genetic diversity and antifungal activity of species of Pestalotiopsis isolated as endophytes from medicinal plants. Fungal Divers. 24, 37–54.

    Google Scholar 

  • Thomas, S.E., J. Crozier, M.C. Aime, H.C. Evans, and K.A. Holmes. 2008. Molecular characterisation of fungal endophytic morphospecies associated with the indigenous forest tree, Theobroma gileri, in Ecuador. Mycol. Res. 112, 852–860.

    Article  CAS  PubMed  Google Scholar 

  • Turner, S.D. and C.F. Friese. 1998. Plant-mycorrhizal community dynamics associated with a moisture gradient within a rehabilitated prairie fen. Restoration Ecol. 6, 44–51.

    Article  Google Scholar 

  • U’Ren, J.M., J.W. Dalling, R.E. Gallery, D.R. Maddison, E.C. Davis, C.M. Gibson, and A.E. Arnold. 2009. Diversity and evolutionary origins of fungi associated with seeds of a neotropical pioneer tree: a case study for analysing fungal environmental samples. Mycol. Res. 113, 432–449.

    Article  PubMed  Google Scholar 

  • Verma, V.C., S.K. Gond, A. Kumar, R.N. Kharwar, and G. Strobel. 2007. The endophytic mycoflora of bark, leaf, and stem tissues of Azadirachta indica A. Juss (neem) from Varanasi (India). Microb. Ecol. 54, 119–125.

    Article  CAS  PubMed  Google Scholar 

  • Wang, B., M.J. Priest, A. Davidson, C.L. Brubaker, M.J. Woods, and J.J. Burdon. 2007. Fungal endophytes of native Gossypium species in Australia. Mycol. Res. 111, 347–354.

    Article  PubMed  Google Scholar 

  • Wei, Y.K., Y.B. Gao, X. Zhang, D. Su, Y.H. Wang, H. Xu, F. Lin, A.Z. Ren, L. Chen, and L.Y. Nie. 2007a. Distribution and diversity of Epichlo populations of Achnatherum sibiricum (Poaceae) in the Inner Mongolia Steppe, China. Fungal Divers. 24, 329–345.

    Google Scholar 

  • Wei, J.G., T. Xu, L.D. Guo, A.R. Liu, Y. Zhang, and X.H. Pan. 2007b. Endophytic Pestalotiopsis species associated with plants of Podocarpaceae, Theaceae and Taxaceae in southern China. Fungal Divers. 24, 55–74.

    CAS  Google Scholar 

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Li, HY., Zhao, CA., Liu, CJ. et al. Endophytic fungi diversity of aquatic/riparian plants and their antifungal activity in vitro . J Microbiol. 48, 1–6 (2010). https://doi.org/10.1007/s12275-009-0163-1

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