Abstract
To produce microbial lipids for biofuel production, carbohydrates and related compounds from biomass have been routinely utilized, yet amino acids (AA) from protein-rich wastes have been overlooked so far. We use the oleaginous yeast Cryptococcus curvatus ATCC 20509 as a lipid producer and evaluate the capacity for lipid production on proteinogenic AA individually or in designated blends under two-staged culture conditions. It was found that cellular lipid contents reached 48.8%, 44.5% and 29.0% when yeast cells were cultivated in media-contained AA blends with compositional profiles similar to those of sheep viscera, meat industry by-products and fish muscle, respectively, and that lipid coefficients were more than 0.10 g g−1. Furthermore, cellular lipid contents were higher than 20% when most AA were used individually. High lipid coefficients of over 0.23 g g−1 were observed when Pro, Trp or Leu were used as a substrate. Results also indicated that higher initial media pH or reduced phosphate concentration was beneficial for lipid production on AA. This work demonstrated the potential to use AA and related wastes as substrates for microbial lipid production by the yeast C. curvatus, which fit well with the protein-based biorefinery concept. Further efforts should be devoted to recognizing the metabolic features, identifying more robust lipid producer and optimizing lipid production processes.
Similar content being viewed by others
Abbreviations
- AA:
-
amino acid
- ATCC:
-
American Type Culture Collection Center
- YEPD:
-
yeast extract peptone dextrose
- SVAA:
-
sheep viscera amino acids
- FMAA:
-
fish muscle amino acids
- MIAA:
-
meat industry by-products amino acids
- TCA:
-
trycarboxylic acid
- FAME:
-
fatty acid methyl esters
- MES:
-
2-(N-morpholino)ethanesulfonic acid
- Ala:
-
L-alanine
- Ser:
-
L-serine
- Gly:
-
glycine
- Thr:
-
L-threonine
- Cys:
-
L-cysteine
- Asp:
-
L-aspartic acid
- Asn:
-
DL-asparagine
- Gln:
-
L-glutamine
- Glu:
-
L-glutamate
- Pro:
-
L-proline
- His:
-
L-histidine
- Arg:
-
L-arginine
- Phe:
-
L-phenylalanine
- Met:
-
L-methionine
- Val:
-
L-valine
- Leu:
-
L-leucine
- Tyr:
-
L-tyrosine
- Ile:
-
L-isoleucine
- Trp:
-
L-tryptophan
- Lys:
-
L-lysine
References
Sajid, Z., Khan, F., & Zhang, Y. (2016). Process simulation and life cycle analysis of biodiesel production. Renewable Energy, 85, 945–952.
Huang, X. F., Shen, Y., Luo, H. J., Liu, J. N., & Liu, J. (2018). Enhancement of extracellular lipid production by oleaginous yeast through preculture and sequencing batch culture strategy with acetic acid. Bioresource Technology, 247, 395–401.
Wahlen, B. D., Morgan, M. R., Mccurdy, A. T., Willis, R. M., Morgan, M. D., Dye, D. J., Bugbee, B., Wood, B. D., & Seefeldt, L. C. (2013). Biodiesel from microalgae, yeast, and bacteria: engine performance and exhaust emissions. Energy and Fuel, 27, 220–228.
Wu, S., Hu, C., Jin, G., Zhao, X., & Zhao, Z. K. (2010). Phosphate-limitation mediated lipid production by Rhodosporidium toruloides. Bioresource Technology, 101, 6124–6129.
Philip, A. B., & Colin, R. (1979). A biochemical explanation for lipid accumulation in Candida 107 and other oleaginous micro-organisms. Journal of General Microbiology, 114, 361–375.
Papanikolaou, S., & Aggelis, G. (2003). Modeling lipid accumulation and degradation in Yarrowia lipolytica cultivated on industrial fats. Current Microbiology, 46(6), 398–402.
Gong, Z., Shen, H., Yang, X., Wang, Q., Xie, H., & Zhao, Z. K. (2014). Lipid production from corn stover by the oleaginous yeast Cryptococcus curvatus. Biotechnology for Biofuels, 7, 1–9.
Yang, X., Jin, G., Gong, Z., Shen, H., Bai, F., & Zhao, Z. K. (2014). Recycling biodiesel-derived glycerol by the oleaginous yeast Rhodosporidium toruloides Y4 through the two-stage lipid production process. Biochemical Engineering Journal, 91, 86–91.
Gong, Z., Zhou, W., Shen, H., Zhao, Z. K., Yang, Z., Yan, J., & Zhao, M. (2016). Co-utilization of corn stover hydrolysates and biodiesel-derived glycerol by Cryptococcus curvatus for lipid production. Bioresource Technology, 219, 552–558.
Liu, J., Yuan, M., Liu, J. N., & Huang, X. F. (2017). Bioconversion of mixed volatile fatty acids into microbial lipids by Cryptococcus curvatus ATCC 20509. Bioresource Technology, 241, 645–651.
Liao, J. C., Mi, L., Pontrelli, S., & Luo, S. (2016). Fuelling the future: microbial engineering for the production of sustainable biofuels. Nature Reviews. Microbiology, 14, 288.
Huang, C., Chen, X., Xiong, L., Chen, X., Ma, L., & Chen, Y. (2013). Single cell oil production from low-cost substrates: the possibility and potential of its industrialization. Biotechnology Advances, 31(2), 129–139.
Li, S. Y., Ng, I. S., Chen, P. T., Chiang, C. J., & Chao, Y. P. (2018). Biorefining of protein waste for production of sustainable fuels and chemicals. Biotechnology for Biofuels, 11, 256.
De, S. F., Claes, L., Vandekerkhove, A., Verduyckt, J., & De Vos, D. E. (2019). Protein-rich biomass waste as a resource for future biorefineries: state of the art, challenges, and opportunities. ChemSusChem, 12, 1272–1303.
El-dalatony, M. M., Salama, E., Kurade, M. B., Kim, K., Govindwar, S. P., Rae, J., Kim, J. R., Kwon, E. E., Min, B., Jang, M., Oh, S. E., & Chang, S. W. (2019). Whole conversion of microalgal biomass into biofuels through successive high-throughput fermentation. Chemical Engineering Journal, 360, 797–805.
Papanikolaou, S., & Aggelis, G. (2011). Lipids of oleaginous yeasts. Part I: biochemistry of single cell oil production. European Journal of Lipid Science and Technology, 113, 1031–1051.
Huo, Y. X., Cho, K. M., Rivera, J. G. L., Monte, E., Shen, C. R., Yan, Y., & Liao, J. C. (2011). Conversion of proteins into biofuels by engineering nitrogen flux. Nature Biotechnology, 29(4), 346–351.
Valta, K., Damala, P., Orli, E., Papadaskalopoulou, C., Moustakas, K., Malamis, D., & Loizidou, M. (2015). Valorisation opportunities related to wastewater and animal by-products exploitation by the Greek slaughtering industry: current status and future potentials. Waste and Biomass Valorization, 6, 927–945.
Ryder, K., Ha, M., Bekhit, A. E. D., & Carne, A. (2015). Characterisation of novel fungal and bacterial protease preparations and evaluation of their ability to hydrolyse meat myofibrillar and connective tissue proteins. Food Chemistry, 172, 197–206.
Aristoy, M. C., & Toldra, F. (2011). Essential amino acids. In L. M. L. Nollet & F. Toldra (Eds.), Handbook of analysis of edible animal by-products (pp. 123–135). Boca Raton: CRC Press.
Gong, Z., Shen, H., Zhou, W., Wang, Y., Yang, X., & Zhao, Z. K. (2015). Efficient conversion of acetate into lipids by the oleaginous yeast Cryptococcus curvatus. Biotechnology for Biofuels, 8, 189.
Bhaskar, N., Modi, V. K., Govindaraju, K., Radha, C., & Lalitha, R. G. (2007). Utilization of meat industry by products: protein hydrolysate from sheep visceral mass. Bioresource Technology, 98, 388–394.
Shen, Q., Guo, R., Dai, Z., & Zhang, Y. (2012). Investigation of enzymatic hydrolysis conditions on the properties of protein hydrolysate from fish muscle (Collichthys niveatus) and evaluation of its functional properties. Journal of Agricultural and Food Chemistry, 60, 5192–5198.
Webster, J. D., Ledward, D. A., & Lawrie, R. A. (1982). Protein hydrolysates from meat industry by-products. Meat Science, 7(2), 147–157.
Gong, Z., Wang, Q., Shen, H., Wang, L., Xie, H., & Zhao, Z. K. (2014). Conversion of biomass-derived oligosaccharides into lipids. Biotechnology for Biofuels, 7, 1–10.
Li, Y., Zhao, Z. K., & Bai, F. (2007). High-density cultivation of oleaginous yeast Rhodosporidium toruloides Y4 in fed-batch culture. Enzyme and Microbial Technology, 41, 312–317.
Johnson, C. L., & Vishniac, W. (1970). Growth inhibition in Thiobacillus neapolitanus by histidine, methionine, phenylalanine, and threonine. Journal of Bacteriology, 104(3), 1145–1150.
Bailey, R. B., & Parks, L. W. (1972). Response of the intracellular adenosine triphosphate pool of Saccharomyces cerevisiae to growth inhibition induced by excess L-methionine. Journal of Bacteriology, 111(2), 542–546.
Ruiz, S. J., van Klooster, J. S., Bianchi, F., & Poolman, B. (2017). Growth inhibition by amino acids in Saccharomyces cerevisiae. bioRxiv, 222224.
Mansour, S., Beckerich, J. M., & Bonnarme, P. (2008). Lactate and amino acid catabolism in the cheese-ripening yeast Yarrowia lipolytica. Applied and Environmental Microbiology, 74(21), 6505–6512.
Shen, X., Zhang, M., Bhandari, B., & Gao, Z. (2019). Novel technologies in utilization of byproducts of animal food processing: a review. Critical Reviews in Food Science and Nutrition, 59(21), 3420–3430.
Fei, Q., Chang, H. N., Shang, L., & Choi, J. D. R. (2011). Exploring low-cost carbon sources for microbial lipids production by fed-batch cultivation of Cryptococcus albidus. Biotechnology and Bioprocess Engineering, 16, 482–487.
Casal, M., Paiva, S., Queiros, O., & Soares-Silva, I. (2008). Transport of carboxylic acids in yeasts. FEMS Microbiology Reviews, 32(6), 974–994.
Zheng, Y., Chi, Z., Ahring, B. K., & Chen, S. (2012). Oleaginous yeast Cryptococcus curvatus for biofuel production: ammonia’s effect. Biomass and Bioenergy, 37, 114–121.
Chi, Z., Zheng, Y., Ma, J., & Chen, S. (2011). Oleaginous yeast Cryptococcus curvatus culture with dark fermentation hydrogen production effluent as feedstock for microbial lipid production. International Journal of Hydrogen Energy, 36, 9542–9550.
Wang, Y., Zhang, S., Zhu, Z., Shen, H., Lin, X., Jin, X., et al. (2018). Systems analysis of phosphate-limitation-induced lipid accumulation by the oleaginous yeast Rhodosporidium toruloides. Biotechnology for Biofuels, 11, 148.
Owen, O. E., Kalhan, S. C., & Hanson, R. W. (2002). The key role of anaplerosis and cataplerosis for citric acid cycle function. The Journal of Biological Chemistry, 277, 30409–30412.
Kumar, A., John, L., Alam, M. M., Gupta, A., Sharma, G., Pillai, B., & Sengupta, S. (2006). Homocysteine and cysteine-mediated growth defect is not associated with induction of oxidative stress response genes in yeast. The Biochemical Journal, 396(1), 61–69.
Oguri, T., Schneider, B., & Reitzer, L. (2012). Cysteine catabolism and cysteine desulfhydrase (CdsH/STM0458) in Salmonella enterica serovar typhimurium. Journal of Bacteriology, 194, 4366–4376.
Lian, J., Garcia-Perez, M., Coates, R., Wu, H., & Chen, S. (2012). Yeast fermentation of carboxylic acids obtained from pyrolytic aqueous phases for lipid production. Bioresource Technology, 118, 177–186.
Acknowledgements
We thank Dr. Xiaobin Yang and Mr. Xiaozan Dai for helpful discussions.
Availability of Supporting Data
Additional files 1–4 contain supporting data.
Funding
This work was financially supported by National Natural Science Foundation of China (Nos. 51761145014 and 21721004).
Author information
Authors and Affiliations
Contributions
ZKZ and RK conceived the project and designed the experiments. RK, HS, QL and XY performed the experiments. WQ and RK did ion chromatography analysis. RK and ZKZ wrote and revised the manuscript. All authors discussed the results and commented on the manuscript. All authors read and approved the final manuscript.
Corresponding author
Ethics declarations
Competing Interests
The authors declare that they have no competing interests.
Ethics Approval and Consent to Participate
Not applicable.
Consent for Publication
All the authors agreed for publication.
Additional information
Publisher’s Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Electronic Supplementary Material
ESM 1
(DOCX 694 kb)
Rights and permissions
About this article
Cite this article
Kamal, R., Shen, H., Li, Q. et al. Utilization of Amino Acid-Rich Wastes for Microbial Lipid Production. Appl Biochem Biotechnol 191, 1594–1604 (2020). https://doi.org/10.1007/s12010-020-03296-9
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s12010-020-03296-9