Abstract
To establish a reverse-transcription loop-mediated isothermal amplification (RT-LAMP) method for rapid detection of porcine reproductive and respiratory syndrome virus (PRRSV), four primers specific to six regions of the N gene were designed. After amplification in an isothermal water bath for 1 h, samples containing PRRSV generated the expected ladder-like products while porcine parvovirus, porcine circovirus, classic swine fever virus, pseudorabies virus, and swine testis cells generated no product. The sensitivity and specificity of the RT-LAMP assay were evaluated by comparison with reverse-transcription polymerase chain reaction (RT-PCR) and real-time PCR. Because it is specific and simple, the RT-LAMP assay will be useful for the diagnosis of PRRSV infection.
References
R. Albert, A. Juan, M. Michael, M. Claudia, Reverse transcription loop-mediated isothermal amplification for the detection of Porcine reproductive and respiratory syndrome virus. J. Vet. Diagn. Invest. 21, 350–353 (2009)
T. An, Y. Zhou, G. Liu, Z. Tian, J. Li, H. Qiu, G. Tong, Genetic diversity and phylogenetic analysis of glycoprotein5 of PRRSV isolates in mainland China from 1996 to 2006: coexistence of two NA-subgenotypes with great diversity. Vet. Microbiol. 123, 43–52 (2007)
A.L. Blomstrom, M. Hakhverdyan, S.M. Reid, J.P. Dukes, D.P. King, S. Belak, M. Berg, A one-step reverse transcriptase loop-mediated isothermal amplification assay for simple and rapid detection of swine vesicular disease virus. J. Virol. Methods 147, 188–193 (2008)
C.M. Chen, S.J. Cui, Detection of porcine parvovirus by loop-mediated isothermal amplification. J. Virol. Methods 155(2), 122–125 (2009)
H.T. Chen, J. Zhang, D.H. Sun, Y.F. Chu, X.P. Cai, X.T. Liu, X.N. Luo, Q. Liu, Y.S. Liu, Rapid detection of porcine circovirus type 2 by loop-mediated isothermal amplification. J. Virol. Methods 149, 264–268 (2008)
Q. Chen, J. Li, X.E. Fang, W. Xiong, Rapid detection of porcine reproductive and respiratory syndrome virus by reverse transcription loop-mediated isothermal amplification. Intervirology 52, 86–91 (2009)
J.E. Collins, D.A. Benfield, W.T. Christianson, L. Harris, J.C. Hennings, D.P. Shaw, S.M. Goyal, S. McCullough, R.B. Morrison, H.S. Joo, D. Gorcyca, D. Chladek, Isolation of swine infertility and respiratory syndrome virus (isolate ATCC VR-2332) in North America and experimental reproduction of the disease in gnotobiotic pigs. J. Vet. Diagn. Invest. 4, 117–126 (1992)
F.X. En, X. Wei, L. Jian, C. Qin, Loop-mediated isothermal amplification establishment for detection of pseudorabies virus. J. Virol. Methods 151, 35–39 (2008)
H. Guarino, M.G. Sagar, P.M. Michael, B.M. Robert, V. Kapur, Detection of porcine reproductive and respiratory syndrome virus by reverse transcription-polymerase chain reaction using different regions of the viral genome. J. Vet. Diagn. Invest. 11, 27–33 (1999)
H. Hill, Overview and history of mystery swine disease (swine infertility and respiratory syndrome). In: Proc Mystery Swine Disease Committee Meeting. Livestock Conservation Institute, Madison WI, USA, pp. 29–30 (1990)
T. Iwamoto, T. Sonobe, K. Hayashi, Loop-mediated isothermal amplification for direct detection of Mycobacterium tuberculosis complex, M. avium, and M. intracellulare in sputum samples. J. Clin. Microbiol. 41, 2616–2622 (2003)
S. Jayawardena, C.Y. Cheung, I. Barr, K.H. Chan, H. Chen, Y. Guan, J.S. Peiris, L.L. Poon, Loop-mediated isothermal amplification for influenza A (H5N1) virus. Emerg. Infect. Dis. 13, 899–901 (2007)
C.S. Lee, H.J. Moon, J.S. Yang, S.J. Park, D.S. Song, B.K. Kang, B.K. Park, Multiplex PCR for the simultaneous detection of pseudorabies virus, porcine cytomegalovirus, and porcine circovirus in pigs. J. Virol. Methods 139, 39–43 (2007)
Q. Li, Q.F. Zhou, C.Y. Xue, J.Y. Ma, D.Z. Zhu, Y.C. Cao, Rapid detection of porcine reproductive and respiratory syndrome virus by reverse transcription loop-mediated isothermal amplification assay. J. Virol. Methods 155, 55–60 (2009)
Y.S. Lyoo, S.B. Kleiboeker, K.Y. Jang, N.K. Shin, J.M. Kang, C.H. Kim, S.J. Lee, J.H. Sur, A simple and rapid chromatographic strip test for detection of antibody to porcine reproductive and respiratory syndrome virus. J. Vet. Diagn. Invest. 17, 469–473 (2005)
W.L. Mengeling, K.M. Lager, A.C. Vorwaid, Clinical effects of porcine reproductive and respiratory syndrome virus on pigs during the early postnatal interval. Am. J. Vet. Res. 59, 52–55 (1998)
J.J. Meulenberg, M.M. Hulst, E.J. de Meijer et al., Lelystad virus, the causative agent of porcine respiratory syndrome (PEARS), is related to LDV and EAV[J]. Virology 192, 62–72 (1993)
Y. Mori, K. Nagamine, N. Tomita, T. Notomi, Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation. Biochem. Biophys. Res. Commun. 289, 150–154 (2001)
G. Nodelijk, G. Wensvoort, B. Kroese, L. Van Leengoed, E. Colijn, J. Verheijden, Comparison of a commercial ELISA and an immunoperoxidase monolayer assay to detect antibodies directed against porcine respiratory and reproductive syndrome virus. Vet. Microbiol. 49, 285–295 (1996)
T. Notomi, H. Masubuchi, T. Yonekawa, K. Watanabe, N. Amino, T. Hase, Loop-mediated isothermal amplification of DNA. Nucleic Acids Res. 28, 63 (2000)
F.A. Osorio, J.A. Galeota, E. Nelson, B. Brodersen, A. Doster, R. Wills, F. Zuckermann, W.W. Laegreid, Passive transfer of virus-specific antibodies confers protection against reproductive failure induced by a virulent strain of porcine reproductive and respiratory syndrome virus and establishes sterilizing immunity. Virology 302, 9–20 (2002)
L. Renée, M. Helmi, D. Serge, R. Magar, Detection of porcine reproductive and respiratory syndrome virus in cell cultures and formalin-fixed tissues by in situ hybridization using a digoxigenin-labeled probe. J. Vet. Diagn. Invest. 8, 3–10 (1996)
J. Sambrook, D.W. Russell, Molecular Cloning: A Laboratory Manual, 3rd edn. (Cold Spring Harbor Laboratory Press, New York, 2001)
T. Seuberlich, J.D. Tratschin, B. Thür, M.A. Hofmann, Nucleocapsid protein-based enzyme-linked immunosorbent assay for detection and differentiation of antibodies against European and North American porcine reproductive and respiratory syndrome virus. Clin. Diagn. Lab. Immunol. 9(6), 1183–1191 (2002)
C. Terpstra, G. Wensvoort, J.M.A. Pol, Experimental reproduction of porcine epidemic abortion and respiratory syndrome (mystery swine disease) by infection with Lelystad virus. Vet. Quart. 13, 131–136 (1991)
K. Tian, X. Yu, T. Zhao, Y. Feng, Z. Cao, C. Wang, Y. Hu, X. Chen, D. Hu, X. Tian, D. Liu, S. Zhang, X. Deng, Y. Ding, L. Yang, Y. Zhang, H. Xiao, M. Qiao, B. Wang, L. Hou, X. Wang, X. Yang, L. Kang, M. Sun, P. Jin, S. Wang, Y. Kitamura, J. Yan, G.F. Gao, Emergence of fatal PRRSV variants: unparalleled outbreaks of atypical PRRS in China and molecular dissection of the unique hallmark. PLoSONE 2, e526 (2007)
G.Z. Tong, Y.J. Zhou, X.F. Hao, Z.J. Tian, T.Q. An, H.J. Qiu, Highly pathogenic porcine reproductive and respiratory syndrome. China Emerg. Infect. Dis. 13, 1434–1436 (2007)
Y. Yamada, M. Itoh, M. Yoshida, Sensitive and rapid diagnosis of human parvovirus B19 infection by loop-mediated isothermal amplification. Br. J. Dermatol. 155, 50–55 (2006)
F. Yue, S. Cui, C. Zhang, K.J. Yoon, A multiplex PCR for rapid and simultaneous detection of porcine circovirus type 2, porcine parvovirus, porcine pseudorabies virus, and porcine reproductive and respiratory syndrome virus in clinical specimens. Virus Genes 38(3), 392–397 (2009)
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The study was supported in part by funding from the National High-tech R&D Program (863 Program-2007AA100606) and the Chinese National Key Laboratory of Veterinary Biotechnology Fund (NKLVBP200807).
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Chen, C., Cui, S., Zhang, C. et al. Development and validation of reverse transcription loop-mediated isothermal amplification for detection of PRRSV. Virus Genes 40, 76–83 (2010). https://doi.org/10.1007/s11262-009-0419-1
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DOI: https://doi.org/10.1007/s11262-009-0419-1