Abstract
The expression profile of a natural bi-directional promoter, derived from the Brassica napus EPSPS-A gene, was studied in transgenic soybean (Glycine max C.V. Maverick) lines. Two constructs, pDAB100331 and pDAB100333, were assembled to test the bi-directionality of the promoter. Two reporter genes, gfp and gusA, were employed and they were interchangeably placed in both constructs, one on each end of the promoter such that both proteins expressed divergently in each construct. In the T0 generation, GUS expression was more uniform throughout the leaf of pDAB100333 transgenic plants, where the gusA gene was expressed from the downstream or EPSPS-A end of the bi-directional promoter. Comparatively, GUS expression was more localized in the midrib and veins of the leaf of pDAB100331 transgenic plants, where the gusA gene was expressed from the upstream end of the bi-directional promoter. These observations indicated a unique expression pattern from each end of the promoter and consistently higher expression in genes expressed from the downstream end (e.g., EPSPS-A end) of the promoter in the tissues examined. The GFP expression pattern followed that of GUS when placed in the same position relative to the promoter. In the T1 generation, transcript analysis also showed higher expression of both gusA and gfp when those genes were located at the downstream end of the promoter. Accordingly, the pDAB100331 events exhibited a higher gfp/gusA transcript ratio, while pDAB100333 events produced a higher gusA/gfp transcript ratio consistent with the observations in T0 plants. These results demonstrated that the EPSPS-A gene bidirectional promoter can be effectively utilized to drive expression of two transgenes for the desired traits.
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Abbreviations
- GUS (protein, or gusA gene):
-
β-Glucuronidase
- GFP:
-
Green fluorescent protein
- YFP:
-
Yellow fluorescent protein
- EPSPS-A:
-
5-enolpyruvyl shikimate-3-phosphate synthase gene A
- BEAP:
-
Brassica napus EPSPS-A promoter
References
Callis J, Raasch J, Vierstra A (1990) Ubiquitin extension proteins of Arabidopsis thaliana. Structure, localization and expression of their promoters in transgenic tobacco. J Biol Chem 265:12486–12493
Chow CN, Zheng HQ, Wu NY, Chien CH, Huang HD, Lee TY, Chiang-Hsieh YF, Hou PF, Yang TY, Chang WC (2016) PlantPAN 2.0: an update of plant promoter analysis navigator for reconstructing transcriptional regulatory networks in plants. Nucleic Acids Res 44:1154–1160
Dasgupta S, Collins GB, Hunt AG (1996) Co-ordinated expression of multiple enzymes in different subcellular compartments in plants. Plant J 16:107–116
De Wilde C, Van Houdt H, De Buck S, Angenon G, De Jaeger G, Depicker A (2000) Plants as bioreactors for protein production: avoiding the problem of transgene silencing. Plant Mol Biol 43:347–359
Fire A (1999) RNA-triggered gene silencing. Trends Genet 15:358–363
Gelvin SG (1987) TR-based sub-Ti plasmids. EP Patent 222493
Gidoni D, Bond-Nutter D, Brosio P, Jones J, Bedbrook J, Dunsmuir P (1988) Coordinated expression between two photosynthetic petunia genes in transgenic plants. Mol Gen Genet 211:507–514
Gupta M, Palta A, Novak S, Urnov F, Gopalan S (2015) Engineered zinc finger proteins targeting 5-enolpyruvyl shikimate-3-phosphate synthase genes. US Patent Publication Number 20150064790
Halfhill MD, Richards HA, Mabon SA, Stewart CN (2001) Expression of GFP and Bt transgenes in Brassica napus and hybridization with Brassica rapa. Theor Appl Genet 103:659–667
Hamilton AJ, Baulcombe DC (1999) A species of small antisense RNA in posttranscriptional gene silencing in plants. Science 286:950–952
Hood EE, Helmer GL, Fraley RT, Chilton MD (1986) The non-T-DNA portion of pTiBo542 is responsible for the hypervirulence of Agrobacterium tumefaciens A281. J Bacteriol 168:1291–1301
Huang ML, Cangelosi GA, Halperin W, Nester EWX (1990) A chromosomal Agrobacterium gene required for effective plant signal transduction. J Bacteriol 172:1814–1822
Jefferson R (1987) Assaying chimeric genes in plants: the GUS gene fusion system. Plant Mol Biol Report 5:387–405
Keddie JS, Tsiantis M, Piffanelli P, Cella R, Hatzopoulos P, Murphy DJ (1994) A seed-specific Brassica napus oleosin promoter interacts with a G-box-speciWc protein and may be bi-directional. Plant Mol Biol 24:327–340
Kumar S, AlAbed D, Whitteck JT, Chen W, Bennett S, Asberry A, Wang X, DeSloover D, Rangasamy M, Wright TR, Gupta M (2015) A combinatorial bidirectional and bicistronic approach for coordinated multi-gene expression in corn. Plant Mol Biol 87:341–353
Li J, Dai X, Zhao Y (2006) A role for auxin response factor 19 in auxin and ethylene signaling in Arabidopsis. Plant Physiol 140:899–908
Liu Y, Sun J, Wu Y (2016) Arabidopsis ATAF1 enhances the tolerance to salt stress and ABA in transgenic rice. J Plant Res 129:955–962
Matzke MA, Matzke AJM (1995) How and why do plants inactivate homologous (Trans) genes? Plant Physiol 107:679–685
Meyer P, Saedler H (1996) Homology-dependent gene silencing in plants. Ann Rev Plant Physiol Plant Mol Biol 47:23–48
Mitra A, Han J, Zhang ZJ, Mitra A (2009) The intergenic region of Arabidopsis thaliana cab1 and cab2 divergent genes functions as a bidirectional promoter. Planta 229:1015–1022
Mol JNM, Stuitje AR, van der Krol A (1989) Genetic manipulation of floral pigmentation genes. Plant Mol Biol 13:287–294
Naito T, Yamashino T, Kiba T, Koizumi N, Kojima M, Sakakibara H, Mizuno T (2007) A link between cytokinin and ASL9 (ASYMMETRIC LEAVES 2 LIKE 9) that belongs to the AS2/LOB (LATERAL ORGAN BOUNDARIES) family genes in Arabidopsis thaliana. Biosci Biotechnol Biochem 71:1269–1278
Pareddy D, Chennareddy S, Minnicks T, Karpova O, Griffin D, Samuel P, Smith K, Sarria R, Mall T (2014) Improved split seed soybean transformation for efficient and high-throughput transgenic event production. US Patent Publication Number 2014/0173780
Que Q, Chilton MD, de Fontes CM, He C, Nuccio M, Zhu T, Wu Y, Chen JS, Shi L (2010) Trait stacking in transgenic crops: challenges and opportunities. GM Crops 1:220–229
Sadanandom A, Piffanelli P, Knott T, Robinson C, Sharpe A, Lydiate D, Murphy D, Fairbairn DJ (1996) Identification of a peptide methionine sulphoxide reductase gene in an oleosin promoter from Brassica napus. Plant J 10:235–242
Sawant SV (2005) A variety of synergistic and antagonistic interactions mediated by cis-acting DNA motifs regulate gene expression in plant cells and modulate stability of transcription complex formed on a basal promoter. J Exp Bot 56:2345–2353
Schonbrunn E, Eschenburg S, Shuttleworth WA, Schloss JV, Amrhein N, Evans JN, Kabsch W (2001) Interaction of the herbicide glyphosate with its target enzyme 5-enolpyruvyl-shikimate 3-phosphate synthase in atomic detail. Proc Natl Acad Sci USA 98(4):1376–1380
Serres R, McCown B, Zeldin E (1997) Detectable β-glucuronidase activity in transgenic cranberry is affected by endogenous inhibitors and plant development. Plant Cell Rep 16:641–646
Shagin DA, Barsova EV, Yanushevich YG, Fradkov AF, Lukyanov KA, Labas YA, Semenova TN, Ugalde JA, Meyers AN, Jose M, Widder EA, Lukyanov SA, Matz MV (2004) GFP-like proteins as ubiquitous metazoan superfamily: evolution of functional features and structural complexity. Mol Biol Evol 21(5):841–850
Steimer A, Amedeo P, Afsar K, Fransz PM (2000) Endogenous targets of transcriptional gene silencing in Arabidopsis. Plant Cell 12:1165–1178
Vaucheret H, Fagard M (2001) Transcriptional gene silencing in plant: target inducers and regulators. Trends Genet 17:29–35
Wohlleben W, Arnold W, Broer I, Hillemann D, Strauch E, Puehler A (1988) Nucleotide sequence of the phosphinothricin N-acetyl-transferase gene from Streptomyces viridochromogenes Tu494 and its expression in Nicotiana tobacum. Gene 70:25–38
Xia Z, Tsubokura Y, Hoshi M, Hanawa M, Yano C, Okamura K, Ahmed TA, Anai T, Watanabe S, Hayashi M, Kawai T, Hossain KG, Masaki H, Asai K, Yamanaka N, Kubo N, Kadowak K, Nagamura Y, Yano M, Sasak T, Harada K (2007) An integrated high-density linkage map of soybean with RFLP, SSR, STS, and AFLP Markers using A single F2 population. DNA Res 14:257–269
Zhang C, Gai Y, Wang W, Zhu Y, Chen X, Jiang X (2008) Construction and analysis of a plant transformation binary vector pBDGG harboring a bi-directional promoter fusing dual visible reporter genes. J Genet Genom 35:245–249
Acknowledgements
The authors acknowledge the excellent technical assistance of Sara Bennett and Sarah Worden for cloning and/or vector construction. The authors are grateful to Lyudmila Sidorenko for the use of Brassica napus expression atlas, to Rodrigo Sarria, Cory Christensen, Michelle Smith, Dayakar Pareddy and Nagesh Sardesai for critical review of the manuscript, and to Pon Samuel for identification of cell types in GUS stained tissues. We are also thankful to Rodrigo Sarria for his support during this project.
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Chennareddy, S., Cicak, T., Clark, L. et al. Expression of a novel bi-directional Brassica napus promoter in soybean. Transgenic Res 26, 727–738 (2017). https://doi.org/10.1007/s11248-017-0042-1
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DOI: https://doi.org/10.1007/s11248-017-0042-1