Abstract
In a two-year survey (2011–2012), 3220 samples were collected and analyzed in order to determine the presence and distribution of viruses in tomato crops at 56 localities of 18 districts in Serbia. Out of 12 viruses tested, Cucumber mosaic virus (CMV), Potato virus Y (PVY), Alfalfa mosaic virus (AMV), Tomato spotted wilt virus (TSWV), Tomato mosaic virus (ToMV) and Tobacco mosaic virus (TMV) were detected in 42.1, 40, 11, 8.6, 2.3 and 1.3% of the total tested samples, respectively. The results revealed that CMV was prevalent in 2011 and PVY in 2012. CMV and PVY, apart from being predominant, were also the most widespread viruses. In general, single infections were the most frequent type of infection. Additionally, the most common mixed infections were double infections and the most prevalent combination was CMV and PVY. In 2011, the incidence of diseases and the percentage of all infection types were significantly higher than in 2012. Furthermore, in 2011, regardless of total single infections being prevalent compared to mixed infections, two prevailing viruses were commonly detected in mixed infections. The additional molecular testing of ELISA-negative samples using virus specific primers did not reveal the presence of Pepino mosaic virus (PepMV), Tomato yellow leaf curl virus (TYLC), Tomato infections chlorosis virus (TICV) and Tomato chlorosis virus (ToCV).
Similar content being viewed by others
References
Abu-Shirbi, A., Monsour, A., Salem, N., & Al-Tamimi, N. (2012). Viral diseases affecting open field tomato in Jordan. Jordan Journal of Agricultural Sciences, 1, 15–21.
Bekesiova, I., Nap, J. P., & Mlynarova, L. (1999). Isolation of high quality DNA and RNA from leaves of the carnivorous plant Drosera rotundifolia. Plant Molecular Biology, 17, 269–277.
Ben Mousa, A., Makni, M., & Marrakchi, M. (2000). Identification of the principal viruses infecting tomato crops in Tunisia. OEPP/EPPO Bulletin, 30, 293–296.
Blancard, D. (2012). Tomato Diseases: Identification, Biology and Control : A colour handbook (second ed.). London: Manson Publishing Ltd..
Crescenzi, A. (2009). Tomato viruses in Italy: Evolution in the past few decades and present status. Acta Horticulturae, 808, 140–150.
Dovas, C. I., Katis, N. I., & Avgelis, A. D. (2002). Multiplex detection of criniviruses associated with epidemics of a yellowing disease of tomato in Greece. Plant Disease, 86, 1345–1349.
FAO (2014). The FAO Statistical Database (FAOSTAT): Food and Agriculture Organization of the United Nations. http://faostat.fao.org/DesktopDefault.aspx?PageID=567#ancor.
Finetti-Sialer, M. M., Di Franco, A., Papanice, M. A., & Gallitelli, D. (1997). Tomato necrotic yellows induced by a novel strain of alfalfa mosaic virus. Journal of Plant Patholology, 79, 115–120.
Gallitelli, D., Di Franco, A., Vovlas, C., & Kaper, J. M. (1988). Infezioni miste del virus del mosaico del centriolo (CMV) e di potyvirus in colture ortive di Puglia e Basilicata. Informatore fitopatologico, 38, 57–64.
Gibbs, A. J., & Gower, J. C. (1960). The use of a multiple transfer method in plant virus transmission studies-some statistical points arising from the analysis of results. Annals of Applied Biology, 48, 75–83.
Glais, L., Tribodet, M., & Kerlan, C. (2002). Genomic variability in potato potyvirus Y (PVY): Evidence that PVYNW and PVYNTN variants are single to multiple recombinants between PVYO and PVYN isolates. Archives of Virology, 147, 363–378.
Hanssen, I. M., & Lapidot, M. (2012). Major tomato viruses in the Mediterranean basin. Advances in Virus Research, 84, 31–66.
Hanssen, I. M., Lepidot, M., & Thomma, B. P. H. J. (2010). Emerging viral diseases of tomato crops. Molecular Plant-Microbe Interactions, 23, 539–548.
Horváth, J., Takács, A., Farkas, R., Kazinczi, G., & Gáborjányi, R. (2007). Epidemiology of tomato pathogen viruses in Hungary. Cereal Research Communications, 35, 489–492.
Jacquemond, E., Verdin, E., Dalmon, A., Guilbaud, L., & Gognalons, P. (2009). Serological and molecular detection of Tomato chlorosis virus and Tomato infectious chlorosis virus in tomato. Plant Pathology, 58, 210–220.
Jones, J. B., Zitter, T. A., Momol, T. M., & Miller, S. A. (2014). Compendium of tomato diseases. St. Paul: American Phytopathological Society.
Krstić, B., Bualjić, A., & Đekić, I. (2007): Economically the most important and quarantine viruses of tomato crops in Serbia (pp. 13). IV Plant protection symposium in Bosnia and Herzegovina, Teslić, Bosna i Hercegovina. (Sr).
Kumar, S., Stecher, G., & Tamura, K. (2016). MEGA7: Molecular evolutionary genetics analysis version 7.0 for bigger datasets. Molecular Biology and Evolution, 33, 1870–1874.
Letschert, B., Adam, G., Lesemann, D. E., Willingmann, P., & Heinze, C. (2002). Detection and differentiation of serologically cross-reacting Tobamoviruses of economical importance by RT-PCR-RFLP. Journal of Virological Methods, 106, 1–10.
Mascia, T., Cillo, F., Fanelli, V., Finetti-Sialer, M., De Stratis, A., Palukaitis, P., & Gallitelli, D. (2010). Characterisation of the interactions between Cucumber mosaic virus and Potato virus Y in mixed infections in tomato. Molecular Plant-Microbe Interactions, 23, 1514–1524.
Massumi, H., Shaabanian, M., Hosseini Pour, A., Heydarnejad, J., & Rahimian, H. (2009). Incidence of viruses infecting tomato and their natural hosts in the southeast and central regions of Iran. Plant Disease, 93, 67–72.
Mijatović, M., Zdravković, J., Marković, Z., & Obradović, A. (2000). Disease intensity of some tomato viruses in Serbia. Acta Physiologiae Plantarum, 22, 332–335.
Mumford, R. A., & Metcalfe, E. J. (2001). The partial sequencing of the genomic RNA of a UK isolate of Pepino mosaic virus and the comparison of the coat protein sequence with other isolates from Europe and Peru. Archives of Virology, 146, 2455–2460.
Nakhla, M. K., Mazyad, H. M., & Maxwell, D. P. (1993). Molecular characterization of four tomato yellow leaf curl virus isolates from Egypt and development of diagnostic methods. Phytopathologia Mediterranea, 32, 163–173.
Nikolić, D., Milojević, K., Stanković, I., Vučurović, A., Ristić, D., Bulajić, A., & Krstić, B. (2012). Cucumber mosaic virus – Important pathogen of the tomato in Serbia (pp. 105–106). XIV plant protection symposium and IX Weeds conference, Zlatibor, Serbia. (Sr).
Parrella, G., & Crescenzi, A. (2005). The present status of tomato viruses in Italy. Acta Horticlturae, 695, 37–42.
Petrović, D., Bulajić, A., Stanković, I., Ignjatov, M., Vujaković, M., & Krstić, B. (2010). Presence and distribution of pepper viruses in Serbia. Field and Vegetable Crop Research, 47, 567–576.
Soler, S., Prohens, J., López, C., Aramburu, J., Galipienso, L., & Nuez, F. (2010). Viruses infecting tomato in València, Spain: Occurrence, distribution and effect of seed origin. Journal of Phytopathology, 158, 797–805.
Ssekyewa, C. (2006). Incidence, distribution and characteristics of major tomato leaf curl and mosaic virus diseases in Uganda, PhD thesis (pp. 1–233). Ghent, Belgium: Faculty of Bioscience Engineering, Ghent University.
Stanković, I., Bulajić, A., Vučurović, A., Ristić, D., Milojević, K., Berenji, J., & Krstić, B. (2011). Status of tobacco viruses in Serbia and molecular characterization of tomato spotted wilt virus isolates. Acta Virologica, 55, 337–347.
Thompson, J. D., Higgins, D. G., & Gibson, T. J. (1994). CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research, 22, 4673–4680.
Vučurović, A., Bulajić, A., Stanković, I., Ristić, D., Berenji, J., Jović, J., & Krstić, B. (2012). Non-persistently aphid-borne viruses infecting pumpkin and squash in Serbia and partial characterization of Zucchini yellow mosaic virus isolates. European Journal of Plant Pathology, 133, 935–947.
Acknowledgements
This investigation was supported by grant III-43001 of the Ministry of Education, Science and Technological Development of the Republic of Serbia.
Author information
Authors and Affiliations
Corresponding authors
Ethics declarations
Conflict of interest
The authors declare that they have no conflict of interest.
Human and animal studies
We confirm that in this research any human and/or animals participant was not used and there is no any disagreement with informed consent.
Electronic supplementary material
Supplementary Fig. S1
Map of Serbia showing districts surveyed for the presence of tomato viruses during 2011. The color of the district shows the prevalence of the virus and the color of the shape of the tomato shows the presence of the tomato virus, which is consistent with the percentage of infection (PDF 4228 kb)
Supplementary Fig. S2
Map of Serbia showing districts surveyed for the presence of tomato viruses during 2012. The color of the district shows the prevalence of the virus and the color of the shape of the tomato shows the presence of the tomato virus, which is consistent with the percentage of infection (PDF 15862 kb)
Rights and permissions
About this article
Cite this article
Nikolić, D., Vučurović, A., Stanković, I. et al. Viruses affecting tomato crops in Serbia. Eur J Plant Pathol 152, 225–235 (2018). https://doi.org/10.1007/s10658-018-1467-y
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10658-018-1467-y