Skip to main content
Log in

Real-time PCR quantification and spatio-temporal distribution of airborne inoculum of Mycosphaerella graminicola in Belgium

  • Published:
European Journal of Plant Pathology Aims and scope Submit manuscript

Abstract

Two kinds of propagules play a role in Mycosphaerella graminicola dissemination: splash-dispersed pycnidiospores and airborne sexual ascospores. A method based on real-time polymerase chain reaction (PCR) assay and using Burkard spore traps was developed to quantify M. graminicola airborne inoculum. The method was tested for its reliability and applied in a spore trap network over a 2-year period in order to investigate the spatio-temporal distribution of airborne inoculum in Belgium. At four experimental sites, airborne inoculum was detected in both years. A seasonal distribution was observed, with the highest mean daily quantities (up to 351.0 cDNA) trapped in July and with clusters detected from September to April. The first year of trapping, a mean daily quantity of 15.7 cDNA of M. graminicola airborne inoculum was also detected in the air above a building in a city where the spatio-temporal distribution showed a similar pattern to that in the field. Mean daily quantities of up to 60.7 cDNA of airborne inoculum were measured during the cereal stem elongation and flowering stages, suggesting that it contributes to the infection of upper leaves later in the season. Most detection, however, tended to occur between flowering and harvest, suggesting significant production of pseudothecia during that period. Variations in mean daily quantities from 1.0 to 48.2 cDNA were observed between sites and between years in the patterns of airborne inoculum. After stem elongation, the quantities detected at a site were positively correlated with the disease pressure in the field. Quantities trapped at beginning of the growing season were also well correlated with the disease level the previous year. Multiple regressions revealed that some factors partly explain the daily variations of airborne inoculum.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7

Similar content being viewed by others

References

  • Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990). Basic local alignment search tool. Journal of Molecular Biology, 215, 403–410.

    PubMed  CAS  Google Scholar 

  • Bathgate, J. A., & Loughman, R. (2001). Ascospores are a source of inoculum of Phaeosphaeria nodorum, P. avenaria f. sp. avenaria and Mycosphaerella graminicola in Western Australia. Australasian Plant Pathology, 30, 317–322.

    Article  Google Scholar 

  • Brown, J. S., Kellock, A. W., & Paddick, R. G. (1978). Distribution and dissemination of Mycosphaerella graminicola (Fuckel) Schroeter in relation to the epidemiology of speckled leaf blotch of wheat. Australian Journal of Agricultural Research, 29, 1139–1145.

    Article  Google Scholar 

  • Burch, M., & Levetin, E. (2002). Effects of meterological conditions on spore plumes. International Journal of Biometeorology, 46, 107–117.

    Article  PubMed  CAS  Google Scholar 

  • Calderon, C., Ward, E., Freeman, J., Foster, S. J., & McCartney, A. (2002a). Detection of airborne inoculum of Leptosphaeria maculans and Pyrenopeziza brassicae in oilseed rape crops by polymerase chain reaction (PCR) assays. Plant Pathology, 51, 303–310.

    Article  CAS  Google Scholar 

  • Calderon, C., Ward, E., Freeman, J., & McCartney, A. (2002b). Detection of airborne fungal spores sampled by rotating-arm and Hirst-type spore traps using polymerase chain reaction assays. Journal of Aerosol Science, 33, 283–296.

    Article  CAS  Google Scholar 

  • Clinckemaillie, A., Dedeurwaerder, G., Duvivier, M., Moreau, J. M., & Legrève, A. (2010). Presence of airborne inoculum of Mycosphaerella graminicola and occurrence of sexual reproduction during the growing season in Belgium. Phytopathology, 100, S26.

    Google Scholar 

  • Cordo, C. A., Simon, M. R., Perelló, A. E., & Alippi, H. E. (1999). Spore dispersal of leaf blotch pathogens of wheat (Mycosphaerella graminicola and Septoria tritici). Proceedings of the fifth International Septoria Workshop, 1999, 98–101.

    Google Scholar 

  • Eriksen, L., & Munk, L. (2003). The occurrence of Mycosphaerella graminicola and its anamorph Septoria tritici in winter wheat during the growing season. European Journal of Plant Pathology, 109, 253–259.

    Article  Google Scholar 

  • Eyal, Z. (1999). The Septoria tritici and Stagonospora nodorum blotch diseases of wheat. European Journal of Plant Pathology, 105, 629–641.

    Article  Google Scholar 

  • Eyal, Z., Scharen, A. L., & van Ginkel, M. (1987). The Septoria diseases of wheat: concepts and methods of disease management. Mexico City: CIMMYT.

    Google Scholar 

  • Fitt, B. D. L., McCartney, H. A., & Walklate, P. J. (1989). The role of rain in dispersal of pathogen inoculum. Annual Review of Phytopathology, 27, 241–270.

    Article  Google Scholar 

  • Fountaine, J. M., Shaw, M. W., Ward, E., & Fraaije, B. A. (2010). The role of seeds and airborne inoculum in the initiation of leaf blotch (Rhynchosporium secalis) epidemics in winter barley. Plant Pathology, 59, 330–337.

    Article  CAS  Google Scholar 

  • Fraaije, B. A., Cools, H. J., Fountaine, J., Lovell, D. J., Motteram, J., West, J. S., et al. (2005). Role of ascospores in further spread of QoI-resistant cytochrome b alleles (G143A) in field populations of Mycosphaerella graminicola. Phytopathology, 95, 933–941.

    Article  PubMed  CAS  Google Scholar 

  • Hasnain, S. M. (1993). Influence of meteorological factors in the air spora. Grana, 28, 187–192.

    Google Scholar 

  • Holb, I. J., Heijne, B., Withagen, J. C. M., & Jeger, M. J. (2004). Dispersal of Venturia inaequalis ascospores and disease gradients from a defined inoculum source. Journal of Phytopathology, 152, 639–646.

    Article  Google Scholar 

  • Hunter, T., Coker, R. R., & Royle, D. J. (1999). The teleomorph stage, Mycosphaerella graminicola, in epidemics of Septoria tritici blotch on winter wheat in the UK. Plant Pathology, 48, 51–57.

    Article  Google Scholar 

  • Kema, G. H. J., Verstappen, E. C. P., Todorova, M., & Waalwijk, C. (1996). Successful crosses and molecular tetrad and progeny analyses demonstrate heterothallism in Mycosphaerella graminicola. Current Genetics, 30, 251–258.

    Article  PubMed  CAS  Google Scholar 

  • King, J. E., Cook, R. J., & Melville, S. C. (1983). A review of Septoria diseases of wheat and barley. Annals of Applied Biology, 103, 345–373.

    Article  Google Scholar 

  • Lee, S. B., & Taylor, J. W. (1990). Isolation of DNA from fungal mycelium and single spores. In M. A. Innis, D. H. Gelfand, J. J. Sninsky, & T. J. White (Eds.), PCR protocols. A guide to methods and applications (pp. 282–288). San Diego: Academics Press, Inc.

    Google Scholar 

  • Luo, Y., Ma, Z., Reyes, H. C., Morgan, D., & Michailides, T. J. (2007). Quantification of airborne spores of Monilia fructicola in stone fruit orchards of California using real-time PCR. European Journal of Plant Pathology, 118, 145–154.

    Article  Google Scholar 

  • Lyon, F. L., Kramer, C. L., & Eversmeyer, M. G. (1983). Variation of airspora in the atmosphere due to weather conditions. Grana, 23, 177–181.

    Article  Google Scholar 

  • Moreau, J. M., & Maraite, H. (1999). Integration of knowledge on wheat phenology and Septoria tritici epidemiology into a disease risk simulation model validated in Belgium. Aspects of Applied Biology, 55, 1–6.

    Google Scholar 

  • Palmer, C. L., & Skinner, W. (2002). Mycosphaerella graminicola: latent infection, crop devastation and genomics. Molecular Plant Pathology, 3, 63–70.

    Article  PubMed  CAS  Google Scholar 

  • Rogers, S. L., Atkins, S. D., & West, J. S. (2009). Detection and quantification of airborne inoculum of Sclerotinia sclerotiorum using quantitative PCR. Plant Pathology, 58, 324–331.

    Article  Google Scholar 

  • Scott, P. R., Sanderson, F. R., & Benedikz, P. W. (1988). Occurrence of Mycosphaerella graminicola, teleomorph of Septoria tritici, on wheat debris in the UK. Plant Pathology, 37, 285–290.

    Article  Google Scholar 

  • Selim, S., Roisin-Fichter, C., Andry, J. B., & Bogdanow B. (2011). Accuracy of real-time PCR to study Mycosphaerella graminicola epidemic in wheat: from spore arrival to fungicide efficiency. In N. Thajuddin (Ed.), Fungicides - beneficial and harmful aspects (chap. 12). Intech.

  • Shaw, M. W., & Royle, D. J. (1989). Airborne inoculum as a major source of Septoria tritici (Mycosphaerella graminicola) infections in winter wheat crops in the UK. Plant Pathology, 38, 45–53.

    Google Scholar 

  • Shaw, M. W., & Royle, D. J. (1993). Factors determining the severity of epidemics of Mycosphaerella graminicola (Septoria tritici) on winter wheat in the UK. Plant Pathology, 42, 882–899.

    Article  Google Scholar 

  • Suffert, F., & Sache, I. (2011). Relative importance of different types of inoculum to the establishment of Mycosphaerella graminicola in wheat crops in north-west Europe. Plant Pathology, 60, 878–889.

    Article  Google Scholar 

  • Suffert, F., Sache, I., & Lannou, C. (2011). Early stages of septoria tritici blotch epidemics of winter wheat: build-up, overseasoning, and release of primary inoculum. Plant Pathology, 60, 166–177.

    Article  Google Scholar 

  • Trout, C., & Levetin, E. (2001). Correlations of spring spore concentrations and meteorological conditions in Tulsa, Oklahoma. International Journal of Biometeorology, 45, 64–74.

    Article  Google Scholar 

  • Williams, R. H., Ward, E., & McCartney, H. A. (2001). Methods for integrated air sampling and DNA analysis for detection of airborne fungal spores. Applied and Environmental Microbiology, 67, 2453–2459.

    Article  PubMed  CAS  Google Scholar 

  • Zhan, J., Mundt, C. C., & McDonald, B. A. (1998). Measuring immigration and sexual reproduction in field populations of Mycosphaerella graminicola. Phytopathology, 88, 1330–1337.

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

This research was supported by the Service Public de Wallonie, Direction générale opérationnelle Agriculture, Ressources naturelles et Environnement. The corresponding authors are indebted to Dr. Ir. Viviane Planchon, Department of Agriculture and Natural Environment Department of Walloon Agricultural Research Centre, Belgium and Dr. Ir. Jerome Ambroise, Center of Applied Molecular Technologies, Institut de Recherche Expérimentale et Clinique, Université catholique de Louvain, Belgium for support in statistical analysis. The authors thank Gérald Marchal, Marie-Eve Renard and Viviane Van Hese for technical assistance.

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Maxime Duvivier or Géraldine Dedeurwaerder.

Additional information

Maxime Duvivier & Géraldine Dedeurwaerder contributed equally to this work.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Duvivier, M., Dedeurwaerder, G., De Proft, M. et al. Real-time PCR quantification and spatio-temporal distribution of airborne inoculum of Mycosphaerella graminicola in Belgium. Eur J Plant Pathol 137, 325–341 (2013). https://doi.org/10.1007/s10658-013-0245-0

Download citation

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10658-013-0245-0

Keywords

Navigation