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Regioselective C-H hydroxylation of omeprazole sulfide by Bacillus megaterium CYP102A1 to produce a human metabolite

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Abstract

Objectives

To find a simple enzymatic strategy for the efficient synthesis of the expensive 5′-hydroxyomeprazole sulfide, a recently identified minor human metabolite, from omeprazole sulfide, which is an inexpensive substrate.

Results

The practical synthetic strategy for the 5′-OH omeprazole sulfide was accomplished with a set of highly active CYP102A1 mutants, which were obtained by blue colony screening from CYP102A1 libraries with a high conversion yield. The mutant and even the wild-type enzyme of CYP102A1 catalyzed the high regioselective (98 %) C-H hydroxylation of omeprazole sulfide to 5′-OH omeprazole sulfide with a high conversion yield (85–90 %).

Conclusions

A highly efficient synthesis of 5′-OH omeprazole sulfide was developed using CYP102A1 from Bacillus megaterium as a biocatalyst.

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References

  • Butler CF, Peet C, Mason AE, Voice MW, Leys D, Munro AW (2013) Key mutations alter the cytochrome P450 BM3 conformational landscape and remove inherent substrate bias. J Biol Chem 288:25387–25399

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Butler CF, Peet C, McLean KJ, Baynham MT, Blankley RT, Fisher K, Rigby SE, Leys D, Voice MW, Munro AW (2014) Human P450-like oxidation of diverse proton pump inhibitor drug by ‘gatekeeper’ mutants of flavocytochrome P450 BM3. Biochem J 460:247–259

    Article  CAS  PubMed  Google Scholar 

  • Li XQ, Weidolf L, Simonsson R, Andersson TB (2005) Enantiomer/enantiomer interactions between the S- and R-isomers of omeprazole in human cytochrome P450 enzymes: major role of CYP2C19 and CYP3A4. J Pharmacol Exp Ther 315:777–787

    Article  CAS  PubMed  Google Scholar 

  • Nevado JJ, Peñalvo GC, Dorado RM, Robledo VR (2014) Simultaneous determination of omeprazole and their main metabolites in human urine samples by capillary electrophoresis using electrospray ionization-mass spectrometry detection. J Pharm Biomed Anal 92:211–219

    Article  CAS  PubMed  Google Scholar 

  • Obach RS (2013) Pharmacologically active drug metabolites: impact on drug discovery and pharmacotherapy. Pharmacol Rev 65:578–640

    Article  CAS  PubMed  Google Scholar 

  • Rezk NL, Brown KC, Kashuba AD (2006) A simple and sensitive bioanalytical assay for simultaneous determination of omeprazole and its three major metabolites in human blood plasma using RP-HPLC after a simple liquid–liquid extraction procedure. J Chromatogr B 844:314–321

    Article  CAS  Google Scholar 

  • Ryu SH, Park BY, Kim SY, Park SH, Jung HJ, Park M, Park KD, Ahn T, Kang HS, Yun CH (2014) Regioselective hydroxylation of omeprazole enantiomers by bacterial CYP102A1 mutants. Drug Metab Dispos 42:1493–1497

    Article  PubMed  Google Scholar 

  • Saccar CL (2009) The pharmacology of esomeprazole and its role in gastric acid related diseases. Expert Opin Drug Metab Toxicol 5:1113–1124

    Article  CAS  PubMed  Google Scholar 

  • van Vugt-Lussenburg BM, Damsten MC, Maasdijk DM, Vermeulen NP, Commandeur JN (2006) Heterotropic and homotropic cooperativity by a drug-metabolising mutant of cytochrome P450 BM3. Biochem Biophys Res Commun 346:810–818

    Article  PubMed  Google Scholar 

  • Wedemeyer RS, Blume H (2014) Pharmacokinetic drug interaction profiles of proton pump inhibitors: an update. Drug Saf 10:187–194

    Google Scholar 

  • Whitehouse CJ, Bell SG, Wong LL (2012) P450 BM3 (CYP102A1): connecting the dots. Chem Soc Rev 41:1218–1260

    Article  CAS  PubMed  Google Scholar 

  • Yun CH, Yim SK, Kim DH, Ahn T (2006) Functional expression of human cytochrome P450 enzymes in Escherichia coli. Curr Drug Metab 7:411–429

    Article  CAS  PubMed  Google Scholar 

  • Yun CH, Kim KH, Kim DH, Jung HC, Pan JG (2007) The bacterial P450 BM3: a prototype for a biocatalyst with human P450 activities. Trends Biotechnol 25:289–298

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgments

This research was supported by the National Research Foundation of Korea (Grant NRF-2016R1A2B4006978) and by the Next-Generation BioGreen 21 program (SSAC Grant# PJ011058), Rural Development Administration, Republic of Korea.

Supporting information

Supplementary Methods-Generation of the CYP102A1 libraries.

Supplementary Methods-Screening of the CYP102A1 libraries.

Supplementary Methods-Liquid chromatography-mass spectrometry analysis.

Supplementary Methods-Identification of the omeprazole sulfide metabolite by NMR spectroscopy.

Supplementary Table 1. Mutated amino acid residues of the CYP102A1 mutants used in this study.

Supplementary Table 2. 1H chemical shifts for 5'-OH omeprazole sulfide.

Supplementary Figure 1. Metabolic pathway of omeprazole in humans.

Supplementary Figure 2. Screening of CYP102A1 mutant libraries.

Supplementary Figure 3. Close look at the 3.81 ppm and NOE results of 5′-OH omeprazole sulfide.

Supplementary Figure 4. The mutation sites for CYP102A1 M16V2 and its mutants.

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Correspondence to Chul-Ho Yun.

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Jang, HH., Ryu, SH., Le, TK. et al. Regioselective C-H hydroxylation of omeprazole sulfide by Bacillus megaterium CYP102A1 to produce a human metabolite. Biotechnol Lett 39, 105–112 (2017). https://doi.org/10.1007/s10529-016-2211-3

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  • DOI: https://doi.org/10.1007/s10529-016-2211-3

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