Skip to main content
Log in

Genetic Diversity in Metapenaeus dobsoni using RAPD Analysis

  • Note
  • Published:
Biochemical Genetics Aims and scope Submit manuscript

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1

References

  • Avise JC (1994) Molecular markers, natural history, and evolution. Chapman and Hall, New York

    Google Scholar 

  • Avise JC, Helfman GS, Saunders NC, Hales LS (1986) Mitochondrial DNA differentiation in North Atlantic eels: population genetic consequences of an unusual life history pattern. Proc Natl Acad Sci USA 83:4350–4354

    Article  CAS  PubMed  Google Scholar 

  • Bardakci F, Skibinski DOF (1994) Applications of the RAPD technique in tilapia fish: species and subspecies identification. Heredity 73:117–123

    Article  CAS  PubMed  Google Scholar 

  • Dahle G, Rahman M, Eriksen AG (1997) RAPD fingerprinting used for discriminating among three populations of Hilsa shad (Tenualosa ilisha). Fish Res 32:263–269

    Article  Google Scholar 

  • Fischer W, Bianchi G (1984) FAO species identification sheets for fishery purposes: Western Indian Ocean (Fishing Area 51). Prepared and printed with the support of the Danish International Development Agency (DANIDA), vol 3. FAO, Rome

  • Garcia DK, Benzie JAH (1995) RAPD markers of potential use in penaeid prawn (Penaeus monodon) breeding programs. Aquaculture 130:137–144

    Article  CAS  Google Scholar 

  • Garcia DK, Faggart MA, Rhodes L, Alcivar-Warren AA, Wyban JA, Carr WH, Sweeney JN, Ebert KM (1994) Genetic diversity of cultured Penaeus vannamei shrimp using three molecular genetic techniques. Mol Mar Biol Biotechnol 3:270–280

    CAS  PubMed  Google Scholar 

  • Klinbunga S (1996) Genetic variation and population structure of the giant tiger shrimp (Penaeus monodon Fabricius). PhD thesis, University of Stirling, Scotland

  • Klinbunga S, Penman DJ, McAndrew BJ, Tassanakajon A (1999) Mitochondrial DNA diversity in three populations of the giant tiger shrimp (Penaeus monodon). Mar Biotechnol 1:113–121

    Article  CAS  PubMed  Google Scholar 

  • Lakra WS, Goswami M, Mohindra V, Lal KK, Punia P (2007) Molecular identification of five Indian sciaenids (Pisces: Perciformes, Sciaenidae) using RAPD markers. Hydrobiologia 583:359–363

    Article  CAS  Google Scholar 

  • Lester LJ (1983) Developing a selective breeding program for penaeid shrimp mariculture. Aquaculture 33:41–50

    Article  Google Scholar 

  • Liu Z, Jarret RL, Duncan RR, Kresovich S (1994) Genetic relationships and variation among ecotypes of seashore paspalum (Paspalum vaginatum) determined by random polymorphic DNA markers. Genome 37:1011–1017

    Article  CAS  PubMed  Google Scholar 

  • Meffe GK (1994) Genetics: conservation of diversity within species. In: Meffe GK, Carroll CR (eds) Principles of conservation biology. Sinauer Associates, Sunderland, MA, pp 161–201

    Google Scholar 

  • Naish KA, Warren M, Bardakci F, Skibinski DOF, Carvalho GR, Mair GC (1995) Multilocus DNA fingerprinting and RAPD reveal similar genetic relationships between strains of Oreochromis niloticus (Pisces: Cichlidae). Mol Ecol 4:271–274

    Article  CAS  PubMed  Google Scholar 

  • Nei M (1972) Genetic distance between populations. Am Nat 106:283–292

    Article  Google Scholar 

  • Nei M (1973) Analysis of genetic diversity in subdivided populations. Proc Natl Acad Sci USA 70:3321–3323

    Article  CAS  PubMed  Google Scholar 

  • Nei M (1987) Molecular evolutionary genetics. Columbia University Press, New York

    Google Scholar 

  • O’Connell M, Skibinski DOF, Beardmore JA (1995) Mitochondrial DNA and allozyme variation in Atlantic salmon (Salmo salar) populations in Wales. Can J Fish Aquat Sci 52:171–178

    Article  Google Scholar 

  • Phongdara A, Chotigeat W, Chandumpai A, Chanpa T, Duangtong P (1999) Identification of Penaeus merguiensis and Penaeus indicus by RAPD-PCR derived DNA markers. Science Asia 25:143–151

    Article  CAS  Google Scholar 

  • Reynolds J, Weir B, Cockerham C (1983) Estimation of the coancestry coefficient: basis for a short-term genetic distance. Genetics 105:767–779

    PubMed  Google Scholar 

  • Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual, 3rd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY

    Google Scholar 

  • Shi T, Kong J, Liu P, Hart LL, Zhuang ZM, Deng JY (1999) RAPD analysis of genetic diversities in Penaeus chinensis: in the western coast of Korean Peninsula. Oceanologia et Limnologia Sinica 30(6):609–614

    CAS  Google Scholar 

  • Sneath PHA, Sokal RR (1973) Numerical taxonomy. Freeman, San Francisco

    Google Scholar 

  • Song LS, Xiang JH, Li CX, Liu BZ, Liu RY (1999) Analysis of RAPD markers of the genetic structures in the natural population and hatchery stock of Penaeus japonicus. Oceanologia et Limnologia Sinica 30(3):261–264

    CAS  Google Scholar 

  • Sunden SLF, Davis SK (1991) Evaluation of genetic variation in a domestic population of Penaeus vannamei (Boone): a comparison with three natural populations. Aquaculture 97:131–142

    Article  Google Scholar 

  • Tassanakajon A, Pongsomboon S, Rimphanitchayakit V, Jarayabhand P, Boonsaeng V (1997) Random amplified polymorphic DNA (RAPD) markers for determination of genetic variation in wild populations of the black tiger prawn (Penaeus monodon) in Thailand. J Mar Biotechnol 6:110–115

    CAS  Google Scholar 

  • Tassanakajon A, Pongsomboon S, Rimphanitchayakit V, Jarayabhand P, Boonsaeng V (1998) Genetic structure in wild populations of black tiger shrimp (Penaeus monodon) using randomly amplified polymorphic DNA analysis. J Mar Biotechnol 6:249–254

    PubMed  Google Scholar 

  • Welsh J, McClelland M (1990) Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res 18:7213–7218

    Article  CAS  PubMed  Google Scholar 

  • Williams JGK, Kubilik AR, Livak KL, Rafaski JA, Tingey SV (1990) DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18:6531–6535

    Article  CAS  PubMed  Google Scholar 

  • Yeh FC, Yang R-C, Boyle T (1999) Popgene version 1.31: Microsoft windows-based freeware for population genetic analysis

  • Yu K, Pauls KP (1992) Optimization of the PCR program for RAPD analysis. Nucleic Acids Res 20:2606

    Article  CAS  PubMed  Google Scholar 

  • Zhuang Z, Shi T, Kong J, Liu P, Liu Z, Meng X, Deng J (2001) Genetic diversity in Penaeus chinensis shrimp as revealed by RAPD technique. Prog Nat Sci 11(6):332–338

    Google Scholar 

Download references

Acknowledgments

The authors are grateful to Dr. S. K. Chakarborty, of the Central Institute of Fisheries Education, for timely support and help. We thank UGC, New Delhi, for UGC JRF and SRF to the first author.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to W. S. Lakra.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Mishra, P.S., Chaudhari, A., Krishna, G. et al. Genetic Diversity in Metapenaeus dobsoni using RAPD Analysis. Biochem Genet 47, 421–426 (2009). https://doi.org/10.1007/s10528-009-9241-7

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10528-009-9241-7

Keywords

Navigation