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Genetic Diversity and Population Differentiation of the Dominant Species Stipa krylovii in the Inner Mongolia Steppe

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Random amplified polymorphic DNA was used to assess the level of genetic diversity and genetic structure of Stipa krylovii (Gramineae), an important dominant species in the northern grasslands of China. Genetic diversity was low within S. krylovii populations, and diversity at the population level was associated with precipitation and cumulative temperature variations. There was much genetic differentiation among populations and among habitats as well. A Mantel test indicated no significant correlation between genetic distance and geographic distance of populations. A nonmetric multidimensional scaling analysis revealed some spatial relationships among the 90 individuals in a two-dimensional plot. Habitat fragmentation and degradation throughout the geographic range of S. krylovii could account for the low genetic diversity and high genetic differentiation of the species. Such information will be useful for conservation managers trying to plan an effective strategy to protect this important species.

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REFERENCES

  • Babbel, G. R., and Selander, R. K. (1974). Genetic variability in edaphically restricted and widespread plant species. Evolution 28:619–630.

    Article  Google Scholar 

  • Bai, Y. F., Li, D. X., Xu, Z. X., and Wei, Z. J. (1999). Growth and reproduction of Stipa krylovii population on a grazing gradient. Acta Ecol. Sin. 19:479–484.

    Google Scholar 

  • Bussell, J. D. (1999). The distribution of random amplified polymorphic DNA (RAPD) diversity amongst populations of Isotoma petraea (Lobeliaceae). Mol. Ecol. 8:775–789.

    Article  CAS  Google Scholar 

  • Chen, S. L., Xia, T., Chen, S. Y., and Zhou, Y. J. (2005). RAPD profiling in detecting genetic variation in endemic Coelonema (Brassicaceae) of Qinghai-Tibet Plateau of China. Biochem. Genet. 43:189–201.

    Article  PubMed  CAS  Google Scholar 

  • Dawson, I. K., Simons, A. J., Waugh, R., and Powell, W. (1995). Diversity and genetic differentiation among subpopulations of Gliricidia sepium revealed by PCR-based assays. Heredity 74:10–18.

    PubMed  CAS  Google Scholar 

  • Du, Z. C., and Yang, Z. G. (1988). The relationships between photosynthetic rate and the illumination in the plants of steppe. Acta Ecol. Sin. 8:319–323.

    Google Scholar 

  • Excoffier, L., Smouse, P. E., and Quattro, J. M. (1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data. Genetics 131:479–491.

    PubMed  CAS  Google Scholar 

  • Fahima, T., Sun, G. L., Beharav, A., Krugman, T., Beiles, A., and Nevo, E. (1999). RAPD polymorphism of wild emmer wheat populations, Triticum dicoccoides, in Israel. Theor. Appl. Genet. 98:434–447.

    Article  CAS  Google Scholar 

  • Freitag, H. (1985). The genus Stipa (Gramineae) in southwest and south Asia. Not. Roy. Bot. Gard. Edinb. 42:355–489.

    Google Scholar 

  • Fritsch, P. W., and Rieseberg, L. H. (1996). The use of random amplified polymorphic DNA (RAPD) in conservation genetics. In Smith, T. B., and Wayne, R. K. (eds.), Molecular Genetic Approaches in Conservation, Oxford University Press, Oxford, UK, pp. 54–73.

    Google Scholar 

  • Ge, S., Hong, D. Y., Wang, H. Q., Liu, Z. Y., and Zhang, C. M. (1998). Population genetic structure and conservation of an endangered conifer, Cathaya argyrophylla (Pinaceae). Int. J. Plant Sci. 159:351–357.

    Article  Google Scholar 

  • Ge, S., Wang, K. Q., Hong, D. Y., Zhang, W. H., and Zu, Y. G. (1999). Comparisons of genetic diversity in the endangered Adenophora lobophylla and its widespread congener, A. potaninii. Consev. Biol. 13:509–513.

    Article  Google Scholar 

  • Gustafson, D. J., Gibson, D. J., and Nickrent, D. L. (1999). Random amplified polymorphic DNA variation among remnant big bluestem (Andropogon gerardii Vitman) populations from Arkansas’ Grand Prairie. Mol. Ecol. 8:1693–1701.

    Article  PubMed  CAS  Google Scholar 

  • Gustafson, D. J., Gibson, D. J., and Nickrent, D. L. (2002). Genetic diversity and competitive abilities of Dalea purpurea (Fabaceae) from remnant and restored grasslands. Int. J. Plant Sci. 163:979–990.

    Article  CAS  Google Scholar 

  • Gustafson, D. J., Gibson, D. J., and Nickrent, D. L. (2004). Conservation genetics of two co-dominant grass species in an endangered grassland ecosystem. J. Appl. Ecol. 41:389–397.

    Article  CAS  Google Scholar 

  • Hamrick, J. L., and Godt, M. J. W. (1990). Allozyme diversity in plant speices. In Brown, A. H. D., Clegg, M. T., and Weir, B. S. (eds.), Plant Population Genetics, Breeding and Genetic Resource, Sinauer Associated, Sunderland, MA, pp. 43–63.

    Google Scholar 

  • Han, B., Wang, J., Zhao, M. L., Xu, Z. X., and Suo, P. F. (2003). Genetic differentiation of Stipa krylovii in different degraded soil. Acta Agrestia Sin. 2:146–153.

    Google Scholar 

  • Hartl, D. L., and Clark, A. G. (1997). Principles of Population Genetics, 3rd edn., Sinauer Associates, Sunderland, MA.

    Google Scholar 

  • Hillis, D., Moritzc, C., and Mable, B. (1996). Molecular Systematics, Sinauer Associated, Sunderland, MA, 655 p.

    Google Scholar 

  • Hsao, J. Y., and Lee, M. (1999). Genetic diversity and microgeographic differentiation of yushan cane (Yushania niitakayamensis Poaceae) in Taiwan. Mol. Ecol. 8:263–270.

    Article  Google Scholar 

  • Huff, D. R., Quinn, J. A., Higgins, B., and Palazzo, A. J. (1998). Random amplified polymorphic DNA (RAPD) variation among native little bluestem [Schizachyrium scoparium (Michx.) Nash] populations from sites of high and low fertility in forest and grassland biomes. Mol. Ecol. 7:1591–1597.

    Article  CAS  Google Scholar 

  • Huh, M. K., and Huh, H. W. (1999). Genetic diversity and population structure of Alnus hirsuta (Betulaceae) in Korea. J. Plant Res. 112:437–442.

    Article  Google Scholar 

  • Hunter, M. L. (1996). Fundamentals of Conservation Biology, Blackwell Science, London.

    Google Scholar 

  • Innes, J., and Hermanutz, I. A. (1988). The mating system and genetic structure in a disjunt population of the seaside golden rod Solidago sempervirens (Asteraceae). Heredity 61:447–454.

    Google Scholar 

  • Knapp, E. E., and Rice, K. J. (1998). Comparison of isozymes and quantitative traits for evaluating patterns of genetic variation in purple needlegrass (Nassella pulchra). Conserv. Biol. 12:1031–1041.

    Article  Google Scholar 

  • Kruskal, J. B. (1964). Nonmetric multidimensional scaling: A numerical method. Psychometrika 29:28–42.

    Google Scholar 

  • Krzanowski, W. J. (1988). Principles of Multivariate Analysis: A User’s Perspective, Oxford University Press, Oxford.

    Google Scholar 

  • Lewontin, R. (1972). The apportionment of human diversity. Evol. Biol. 6:381–398.

    Google Scholar 

  • Li, B. (1962). Zonal vegetation types and their eco-geographic characteristics in Inner Mongolia. Acta Sci. Nat. Univ. Neimongol 2:3–10.

    Google Scholar 

  • Li, B. (1997). Outline of the steppe vegetation of China and its utilization. In Editorial of Libo’s works. Libo’s works, Science Press, Beijing, P.R. China, pp. 399–400.

    Google Scholar 

  • Li, Q. F., Yi, J., Zhang, L. J., and Wu, R. (1995). Germination testing standard and seedling developing characteristics for seeds of Stipa krylovii. Pratacult. Sci. 12(4):50–52.

    CAS  Google Scholar 

  • Li, W. G., Shen, J. J., and Wang, J. B. (2005). Genetic diversity of the annual weed Monochoria vaginalis in southern China detected by random amplified polymorphic DNA and inter-simple sequence repeat analyses. Weed Res. 45:424–430.

    Article  CAS  Google Scholar 

  • Liu, H. F., Gao, Y. B., Ruan, W. B., Chen, L., Li, C. L., Zhao, N. X., and Wang, D. (2004). Genetic differentiation within and between Leymus chinensis populations from different zones of Mid-Eastern Inner Mongolia steppe. Acta Ecol. Sin. 24:2157–2164.

    Google Scholar 

  • Mantel, N. A. (1967). The detection of disease clustering and a generalized regression approach. Cancer Res. 27:209–220.

    PubMed  CAS  Google Scholar 

  • Meng, J., and Chen, S. H. (1997). Ecological characteristics of Stipa krylovii. J. Inner Mongolia Inst. Agr. Anim. Husb. 2:33–37.

    Google Scholar 

  • Milligan, B. G., Leebens-Mack, J., and Strand, A. E. (1994). Conservation genetics: Beyond the maintenance of marker diversity. Mol. Ecol. 3:423–435.

    Google Scholar 

  • Nei, M. (1973). Analysis of gene diversity in subdivided populations. Proc. Natl. Acad. Sci. U.S.A. 70:3321–3323.

    Article  PubMed  CAS  Google Scholar 

  • Nevo, E., Baum, B., Beiles, A., and Johnson, D. A. (1998). Ecological correlates of RAPD DNA diversity of wild barley, Hordeum spontaneum, in the Fertile Crescent. Genet. Res. Crop Evol. 45:151–159.

    Article  Google Scholar 

  • Newton, A. C., Allnutt, T. R., Dvorak, W. S., Del Castillo R. F., and Ennos, R. A. (2002). Patterns of genetic varition in Pinus chiapensis, a threatened Mexican pine, detected by RAPD and mitochondrial DNA RFLP markers. Heredity 89:191–198.

    Article  PubMed  CAS  Google Scholar 

  • Nybom, H. (2004). Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Mol. Ecol. 13:1143–1155.

    Article  PubMed  CAS  Google Scholar 

  • Nybom, H., and Bartish, I. V. (2000). Effects of life history traits and sampling strategies on genetic diversity estimates obtained with RAPD markers in plants. Perspect. Plant Ecol. Evol. Syst. 3(2):93–114.

    Article  Google Scholar 

  • Prentice, H. C., Lōnn, M., Lefkovitch, L. P., and Runyeon, H. (1995). Associations between allele frequencies in Festuca ovina and habitat variation in the alvar grasslands on the Baltic island of Öland. J. Ecol. 83:391–402.

    Article  Google Scholar 

  • Qian, W., Ge, S., and Hong, D. Y. (2001). Genetic variation within and among populations of a wild rice Oryza granulata from China detected by RAPD and ISSR markers. Theor. Appl. Genet. 102:440–449.

    Article  CAS  Google Scholar 

  • Reisch, C., Anke, A., and Rohl, M. (2005). Molecular variation within and between ten populations of Primula farinosa (Primulaceae) along an altitudinal gradient in the northern Alps. Basic Appl. Ecol. 6:35–45.

    Article  CAS  Google Scholar 

  • Reisch, C., Poschlod, P., and Wingender, R. (2003). Genetic differentiation among populations of Sesleria albicans Kit. ex Schultes (Poaceae) from ecologically different habitats in central Europe. Heredity 91:519–527.

    Article  PubMed  CAS  Google Scholar 

  • Rohlf, F. J. (1994). NTSYS-pc, Numerical Taxonomy and Multivariate Analysis System, Version 1.80, Exeter Software, New York.

  • Turpeinen, T., Tenhola, T., Manninen, O., Nevo, E., and Nissilä, E. (2001). Microsatellite diversity associated with ecological factors in Hordeum spontaneum populations in Israel. Mol. Ecol. 10:1577–1591.

    Article  PubMed  CAS  Google Scholar 

  • Wallace, L. E. (2002). Examining the effects of fragmentation on genetic variation in Platanthera leucophaea (Orchidaceae): Inferences from allozyme and random amplified polymorphic DNA markers. Pl. Sp. Biol. 17:37–49.

    Article  Google Scholar 

  • Wang, J. L., Gao, Y. B., Zhao, N. X., Ren, A. Z., Ruan, W. B., Chen, L., Liu, J. L., and Li, C. L. (2006). Morphological and RAPD analysis of the dominant species Stipa krylovii Roshev. in Inner Mongolia steppe. Bot. Stud. 47:23–35.

    CAS  Google Scholar 

  • Wen, C. S., and Hsiao, J. Y. (1999). Genetic differentiation of Lilium longiflorum Thunb. var. scabrum Masam. (Liliaceae) in Taiwan using random amplified polymorphic DNA and morphological characters. Bot. Bull. Acad. Sin. 40:65–71.

    CAS  Google Scholar 

  • Williams, J. G. K., Kubelik, A. R., Livak, K. J., Rafalski, J. A., and Tingey, S. V. (1990). DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 18:6531–6535.

    PubMed  CAS  Google Scholar 

  • Yeh, F. C., Yang, R. C., and Boyle, T. (1999). PopGene Version 1.32, Microsoft Windows Base Software for Population Genetic Analysis: A Quick User’s Guide, Center for International Forestry Research, University of Alberta, Alberta, Canada.

    Google Scholar 

  • Zhao, N. X., Gao, Y. B., Wang, J. L., Chen, L., Ruan, W. B., Ren, A. Z., and Liu, H. F. (2004). A RAPD analysis on genetic differentiation of Stipa krylovii populations in central and eastern Inner Mongolia steppe. Acta Ecol. Sin. 24:2178–2185.

    Google Scholar 

  • Zhao, N. X., Gao, Y. B., Wang, J. L., Ren, A. Z., and Xu, H. (2006). RAPD diversity of Stipa grandis populations and its association with some ecological factors. Acta Ecol. Sin. 26:1312–1319.

    Article  CAS  Google Scholar 

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ACKNOWLEDGMENTS

This work was supported by the State Ministry of Science and Technology as part of the National Basic Research Program of China (Grant no. G2000018601).

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Correspondence to Yu-Bao Gao.

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Zhao, NX., Gao, YB., Wang, JL. et al. Genetic Diversity and Population Differentiation of the Dominant Species Stipa krylovii in the Inner Mongolia Steppe. Biochem Genet 44, 504–517 (2006). https://doi.org/10.1007/s10528-006-9054-x

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