Skip to main content
Log in

Starmerella syriaca f.a., sp. nov., an osmotolerant yeast species isolated from flowers in Syria

  • Original Paper
  • Published:
Antonie van Leeuwenhoek Aims and scope Submit manuscript

Abstract

Four strains of a novel asexual ascomycetous yeast species were isolated from Malva sp. flowers in Syria. Sequencing of the regions spanning the small subunit, 5.8S, and the D1/D2 domains of the large subunit ribosomal RNA genes showed that the isolates were conspecific. Comparative analysis of these sequences and the corresponding sequences of the type strains of ascomycetous yeasts revealed that the novel species is phylogenetically related to members of the Starmerella clade. Its closest relative is Candida vaccinii. For the new species the name Starmerella syriaca is proposed. Its strains are osmotolerant and produce pseudohypha-like structures capable of penetrating agar media. The type strain is 2-1362T (=CBS 13909T = NCAIM Y.02138T = CCY 090-003-001T). The GenBank accession numbers for its nucleotide sequences are: JX515986 (D1/D2 LSU), JX515987 (ITS1-5.8S-ITS2) and JX515988 (SSU). Mycobank: MB 810090.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3

Similar content being viewed by others

References

  • Brysch-Herzberg M (2004) Ecology of yeasts in plant-bumblebee mutualism in Central Europe. FEMS Microbiol Ecol 50:87–100

    Article  CAS  PubMed  Google Scholar 

  • Daniel H-M, Lachance M-A, Kurtzman CP (2014) On the reclassification of species assigned to Candida and other anamorphic ascomycetous yeast genera based on phylogenetic circumscription. Antonie Van Leeuwenhoek 106:67–84

    Article  PubMed  Google Scholar 

  • Felsenstein J (2007) PHYLIP (phylogeny inference package), version 3.67. Department of Genome Sciences, University of Washington, Seattle

  • Felsenstein J, Churchill GA (1996) A hidden Markov model approach to variation among sites in rate of evolution. Mol Biol Evol 13:93–104

    Article  CAS  PubMed  Google Scholar 

  • Gimeno CJ, Ljungdahl PO, Styles CA, Fink GR (1992) Unipolar cell divisions in the yeast S. cerevisiae lead to filamentous growth: regulation by starvation and RAS. Cell 68:1077–1090

    Article  CAS  PubMed  Google Scholar 

  • Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, Gascuel O (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59:307–321

    Article  CAS  PubMed  Google Scholar 

  • Herrera CM, de Vega C, Canto A, Pozo MI (2009) Yeasts in floral nectar: a quantitative survey. Ann Bot 103:1415–1423

    Article  PubMed Central  PubMed  Google Scholar 

  • Herrera CM, Canto A, Pozo MI, Bazaga P (2010) Inhospitable sweetness: nectar filtering of pollinator-borne inocula leads to impoverished, phylogenetically clustered yeast communities. Proc R Soc B 277:747–754

    Article  PubMed Central  PubMed  Google Scholar 

  • Inglis GD, Sigler L, Goettel MS (1993) Aerobic microorganisms associated with alfalfa leafcutter bees (Megachile rotundata). Microb Ecol 26:125–143

    CAS  PubMed  Google Scholar 

  • James SA, Bond CJ, Roberts IN (2001) Candida sorbosivorans sp. nov., a new member of the genus Candida Berkhout. Int J Syst Evol Microbiol 51:1215–1219

    Article  CAS  PubMed  Google Scholar 

  • Kurtzman CP, Robnett CJ (1998) Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences. Antonie Van Leeuwenhoek 73:331–371

    Article  CAS  PubMed  Google Scholar 

  • Kurtzman CP, Fell JW, Boekhout T, Robert V (2011) Methods for isolation, phenotypic characterization and maintenance of yeasts. In: Kurtzman CP, Fell JW, Boekhout T (eds) The yeasts, a taxonomic study, 5th edn. Elsevier Science, Amsterdam, pp 87–110

    Chapter  Google Scholar 

  • Lachance MA (2011) Starmerella Rosa and Lachance (1998). In: Kurtzman CP, Fell JW, Boekhout T (eds) The yeasts: a taxonomic study. Elsevier, Amsterdam, pp 811–815

    Chapter  Google Scholar 

  • Lachance M-A, Bowles JM, Dıaz MMC, Janzen DH (2001a) Candida cleridarum, Candida tilneyi and Candida powellii, three new yeast species isolated from insects associated with flowers. Int J Syst Evol Microbiol 51:1201–1207

    Article  CAS  PubMed  Google Scholar 

  • Lachance M-A, Starmer WT, Rosa CA, Bowles JM, Baker JSF, Janzen DH (2001b) Biogeography of the yeasts of ephemeral flowers and their insects. FEMS Yeast Res 1:1–8

    Article  CAS  PubMed  Google Scholar 

  • Lachance M-A, Boekhout T, Scorzetti G, Fell JW, Kurtzman CP (2011) Candida Berkhout (1923). In: Kurtzman CP, Fell JW, Boekhout T (eds) The yeasts: a taxonomic study. Elsevier, Amsterdam, pp 988–1278

    Google Scholar 

  • Madhani HD, Fink GR (1998) The control of filamentous differentiation and virulence in fungi. Trends Cell Biol 8:348–353

    Article  CAS  PubMed  Google Scholar 

  • Nagy LG, Ohm RA, Kovacs GM, Floudas D, Riley R, Gacser A, Sipiczki M, Davis JM, Doty SL, de Hoog GS, Lang BF, Spatafora JW, Martin FM, Grigoriev IV, Hibbett DS (2014) Latent homology and convergent regulatory evolution underlies the repeated emergence of yeasts. Nat Commun 5:4471

    Article  PubMed  Google Scholar 

  • Nakase T, Jindamorakot S, Imanishi Y, Am-in S, Ninomiya S, Kawasaki H, Limtong S (2010) Candida potacharoeniae sp. nov. and Candida spenceri sp. nov., two novel galactose-containing ascomycetous anamorphic yeast species isolated in Thailand. J Gen Appl Microbiol 56:287–295

    Article  CAS  PubMed  Google Scholar 

  • Nilsson RH, Kristiansson E, Ryberg M, Hallenberg N, Larsson K-H (2008) Intraspecific ITS variability in the kingdom fungi as expressed in the international sequence databases and its implications for molecular species identification. Evol Bioinformatics 4:193–201

    Google Scholar 

  • O’Donnell K (1993) Fusarium and its near relatives. In: Reynolds DR, Taylor JW (eds) The fungal holomorph: mitotic, meiotic and pleomorphic speciation in fungal systematics. CAB International, Wallingford, pp 225–233

    Google Scholar 

  • Osiewacz HD (2005) Molecular biology of fungal development. Marcel Dekker, New York

    Google Scholar 

  • Page RDM (1996) TreeView: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12:357–358

    CAS  PubMed  Google Scholar 

  • Posada D (2008) jModelTest: phylogenetic model averaging. Mol Biol Evol 25:1253–1256

    Article  CAS  PubMed  Google Scholar 

  • Pozo MI, Herrera CM, Bazaga P (2011) Species richness of yeast communities in floral nectar of Southern Spanish plants. Microb Ecol 61:82–91

    Article  PubMed  Google Scholar 

  • Pozo MI, Lachance M-A, Herrera CM (2012) Nectar yeasts of two southern Spanish plants: the roles of immigration and physiological traits in community assembly. FEMS Microb Ecol 80:281–293

    Article  CAS  Google Scholar 

  • Ronquist F, Teslenko M, van der Mark P, Ayres D, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61:539–542

    Article  PubMed Central  PubMed  Google Scholar 

  • Rosa CA, Lachance M-A, Silva JOC, Teixeira ACP, Marini MM, Antonini Y, Martins RP (2003) Yeast communities associated with stingless bees. FEMS Yeast Res 4:271–275

    Article  CAS  PubMed  Google Scholar 

  • Saccone C, Lanave C, Pesole G, Preparata G (1990) Influence of base composition on quantitative estimates of gene evolution. Methods Enzymol 183:570–583

    Article  CAS  PubMed  Google Scholar 

  • Sanchez-Martinez C, Perez-Martin J (2001) Dimorphism in fungal pathogens: Candida albicans and Ustilago maydis—similar inputs, different outputs. Curr Opin Microbiol 4:214–221

    Article  CAS  PubMed  Google Scholar 

  • Sipiczki M (2003) Candida zemplinina sp. nov., an osmotolerant and psychrotolerant yeast that ferments sweet botrytized wines. Int J Syst Evol Microbiol 53:2079–2083

    Article  CAS  PubMed  Google Scholar 

  • Sipiczki M (2011) Dimorphic cycle in Candida citri sp. nov., a novel yeast species isolated from rotting fruit in Borneo. FEMS Yeast Res 11:202–208

    Article  CAS  PubMed  Google Scholar 

  • Sipiczki M (2012) Pichia bruneiensis sp. nov., a novel biofilm producing dimorphic yeast species isolated from flowers in Borneo. Int J Syst Evol Microbiol 62:3099–3104

    Article  PubMed  Google Scholar 

  • Sipiczki M (2013a) Detection of yeast species also occurring in substrates associated with animals and identification of a novel dimorphic species in Verbascum flowers from Georgia. Antonie Van Leeuwenhoek 103:567–576

    Article  PubMed  Google Scholar 

  • Sipiczki M (2013b) Starmerella caucasica sp. a novel anamorphic yeast species isolated from flowers in the Caucasus. J Gen Appl Microbiol 59:67–73

    Article  CAS  PubMed  Google Scholar 

  • Sipiczki M, Kajdacsi E (2009) Jaminaea angkoriensis gen. nov., sp. nov., a novel anamorphic fungus containing an S943 nuclear small subunit rRNA group IB intron represents a basal branch of Microstromatales. Int J Syst Evol Microbiol 59:914–920

    Article  CAS  PubMed  Google Scholar 

  • Sipiczki M, Takeo K, Yamaguchi M, Yoshida S, Miklos I (1998) Environmentally controlled dimorphic cycle in a fission yeast. Microbiology 144:1319–1330

    Article  CAS  PubMed  Google Scholar 

  • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Tokuoka K, Ishitani T, Goto S, Komagata K (1987) Four new yeast species belonging to the genus Candida. J Gen Appl Microbiol 33:1–10

    Article  Google Scholar 

  • van der Walt JP, Yarrow D (1984) Methods for the isolation, maintenance, classification and identification of yeasts. In: Kreger-van Rij NJW (ed) The yeasts: a taxonomic study. Elsevier, Amsterdam, pp 45–104

    Chapter  Google Scholar 

  • White TJ, Burns T, Lee S, Taylor J (1990) Amplification and sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Snisky JJ, White TJ (eds) PCR protocols. A guide to methods and applications. Acadamic Press, San Diego, pp 315–322

    Chapter  Google Scholar 

Download references

Acknowledgments

The author thanks Anita Csabai-Olah for her expert technical assistance. This work was supported by the grant OTKA 101323 provided by the Hungarian National Office for Research and Technology.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Matthias Sipiczki.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Sipiczki, M. Starmerella syriaca f.a., sp. nov., an osmotolerant yeast species isolated from flowers in Syria. Antonie van Leeuwenhoek 107, 847–856 (2015). https://doi.org/10.1007/s10482-015-0377-7

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10482-015-0377-7

Keywords

Navigation