Abstract
In this work, a novel dot-blot DNAzyme-linked aptamer assay (DLAA) for protein detection is developed with thrombin as a model protein. A peroxidase-like DNAzyme which serves as the catalytic label is tethered to a 15-mer thrombin-binding aptamer to form a label-free DNAzyme-linked aptamer probe. Based on specific interaction of the aptamer with target protein immobilized on nitrocellulose membrane, a DNAzyme layer is introduced onto the membrane. The DNAzyme can catalyze the H2O2-mediated oxidation of 3,3′,5,5′-tetramethylbenzidine to produce a colored insoluble product that is apt to be adsorbed onto the nitrocellulose membrane. As a result, blue dots appear on the membrane, in contrast to the colorless background. As the concentration of thrombin increases, the color of dots gets deep. Such a protein concentration-dependent color change can be quantified via an image-processing software, with a detection limit of 0.6 μM. Furthermore, this assay has been applied successfully to the detection of thrombin in biological samples (e.g., human serum), indicating its practicality for bioanalysis.
References
Travascio P, Li YF, Sen D (1998) Chem Biol 5:505–517
Li D, Shlyahovsky B, Elbaz J, Willner I (2007) J Am Chem Soc 129:5804–5805
Li T, Dong SJ, Wang EK (2009) Anal Chem 81:2144–2149
Li T, Li BL, Wang EK, Dong SJ (2009) Chem Commun 3551-3553
Li BL, Du Y, Li T, Dong SJ (2009) Anal Chim Acta 651:234–240
Yang X, Li T, Li BL, Wang EK (2010) Analyst 135:71–75
Pavlov V, Xiao Y, Gill R, Dishon A, Kotler M, Willner I (2004) Anal Chem 76:2152–2156
Xiao Y, Pavlov V, Gill R, Bourenko T, Willner I (2004) Chembiochem 5:374–379
Li T, Li BL, Dong SJ (2007) Anal Bioanal Chem 389:887–893
Li T, Wang EK, Dong SJ (2008) Chem Commun 5520-5522
Elbaz J, Shlyahovsky B, Li D, Willner I (2008) Chembiochem 9:232–239
Deng MG, Zhang D, Zhou YY, Zhou X (2008) J Am Chem Soc 130:13095–13102
Li JS, Yao JJ, Zhong WW (2009) Chem Commun 4962-4964
Serban D, Taraboulos A, Dearmond SJ, Prusiner SB (1990) Neurology 40:110–117
Bellanger AP, Humbert P, Gavignet B, Deschaseaux AD, Barisien C, Roussel S, Millon L, Aubin F, Piarroux R (2010) Brit J Dermatol 162:80–82
Hernandez-Cruz E, Gonzalez-Cabriales JJ, Ordaz-Pichardo C, de la Cruz-Hernandez NI, Flores-Gutierrez GH (2009) J Helminthol 83:333–337
Courtioux B, Bisser S, M'Belesso P, Ngoungou E, Girard M, Nangouma A, Josenando T, Jauberteau-Marchan MO, Bouteille B (2005) J Clin Microbiol 43:4789–4795
Wang YL, Li D, Ren W, Liu ZJ, Dong SJ, Wang EK (2008) Chem Commun 2520–2522
Higuchi A, Siao Y-D, Yang S-T, Hsieh P-V, Fukushima H, Chang Y, Ruaan R-C, Chen W-Y (2008) Anal Chem 80:6580–6586
Balamurugan S, Obubuafo A, Soper SA, Spivak DA (2008) Anal Bioanal Chem 390:1009–1021
Mairal T, Ozalp VC, Sanchez PL, Mir M, Katakis I, O'Sullivan CK (2008) Anal Bioanal Chem 390:989–1007
Huntington JA, Baglin TP (2003) Trends Pharmacol Sci 24:589–595
Li T, Shi LL, Wang EK, Dong SJ (2009) Chem-Eur J 15:1036–1042
Farrah SR, Shah DO, Ingram LO (1981) P Natl Acad Sci U S A 78:1229–1232
Nam JM, Wise AR, Groves JT (2005) Anal Chem 77:6985–6988
Centi S, Tombelli S, Minunni M, Mascini M (2007) Anal Chem 79:1466–1473
Acknowledgments
This work is supported by the National Natural Science Foundation of China with the Grant 20735003 and 20890020, 973 projects 2009CB930100 and 2010CB933600, and the Chinese Academy of Sciences KJCX2.YW.H11.
Author information
Authors and Affiliations
Corresponding author
Electronic supplementary material
Below is the link to the electronic supplementary material.
ESM 1
(PDF 692 kb)
Rights and permissions
About this article
Cite this article
Zhu, J., Li, T., Hu, J. et al. A novel dot-blot DNAzyme-linked aptamer assay for protein detection. Anal Bioanal Chem 397, 2923–2927 (2010). https://doi.org/10.1007/s00216-010-3802-9
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00216-010-3802-9