Abstract
We isolated and characterized a total of 31 microsatellite loci from the mole salamander, Ambystoma talpoideum. Loci were screened in 20 individuals from a single location in Aiken, South Carolina. The number of alleles per locus ranged from 3 to 11, observed heterozygosity ranged from 0.000 to 0.700, and the probability of identity values ranged from 0.031 to 0.400. These new loci will provide tools for examining the genetic diversity, structure, mating system, and adult morph determination of A. talpoideum.
References
Castoe TA, Poole AW, de Koning APJ, Jones KL, Tomback DF, Oyler-McCance SJ, Fike JA, Lance SL, Streicher JW, Smith EN, Pollack DD (2012) Rapid microsatellite identification from Illumina paired-end genomic sequencing in two birds and a snake. PLoS One 7(2):e30953
Conant R, Collins JT (1991) Peterson field guide to reptiles and amphibians, Eastern and Central North America, 3rd edn. Houghton Mifflin Company, Boston
Croshaw DA, Schable NA, Peters MB, Glenn TC (2005) Isolation and characterization of microsatellite DNA loci from Ambystoma salamanders. Conserv Genet 6(3):473–479. doi:10.1007/s10592-005-4989-8
Harris RN (1987) Density-dependant paedomorphosis in the salamander Notophthalmus viridescens dorsalis. Ecology 68:705–712
Lannoo M (2005) Amphibian declines: the conservation statues of United States species. Berkeley University of California Press, Berkeley
O’Bryhim J, Somers C, Lance SL, Yau M, Boreham DR, Jones KL, Taylor EB (2013) Development and characterization of twenty-two novel microsatellite markers for the mountain whitefish, Prosopium williamsoni and cross-amplification in the round whitefish, P. cylindraceum, using paired-end Illumina shotgun sequencing. Conserv Genet Resour 5:89–91. doi:10.1007/s12686-012-9740-4
Peakall R, Smouse PE (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6:288–295
Petranka JW (1998) Salamanders of the United States and Canada. Smithsonian Institution Press, Washington
Rothermel BR, Luhring TM (2005) Burrow availability and desiccation risk of mole salamanders (Ambystoma talpoideum) in harvested versus unharvested forest stands. J Herpetol 39:619–626
Rousset F (2008) GENEPOP’007: a complete re-implementation of the GENEPOP software for Windows and Linux. Mol Ecol Res 8:103–106
Scott DE (1992) Timing of reproduction of paedomorphic and metamorphic Ambystoma talpoideum. Am Midl Nat 129(2):397–402
Semlitsch RD, Gibbons JW (1985) Phenotypic variation in metamorphosis and paedomorphosis in the salamander Ambystoma talpoideum. Ecology 66(4):1123–1130
Acknowledgments
Manuscript preparation was partially supported by the DOE under Award Number DE-FC09-07SR22506 to the University of Georgia Research Foundation. We thank David Scott for assistance with sample collection.
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Love, C.N., Flynn, R.W., Nunziata, S.O. et al. Development of 31 polymorphic microsatellite markers for the mole salamander (Ambystoma talpoideum) using Illumina paired-end sequencing. Conservation Genet Resour 5, 951–954 (2013). https://doi.org/10.1007/s12686-013-9940-6
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DOI: https://doi.org/10.1007/s12686-013-9940-6